RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 UBE2L6O14933 153 aa10.16□□□□□ -0.78
CSRP1-201ENST00000340006 PTTG1IPP53801 180 aa10.16□□□□□ -0.78
CSRP1-201ENST00000340006 ORAOV1Q8WV07 137 aa10.16□□□□□ -0.78
CSRP1-201ENST00000340006 TOMM6Q96B49 74 aa10.16□□□□□ -0.78
CSRP1-201ENST00000340006 C20orf202A1L168 122 aa10.15□□□□□ -0.78
CSRP1-201ENST00000340006 COL5A1-AS1Q5SY13 56 aa10.15□□□□□ -0.78
CSRP1-201ENST00000340006 TMEM243Q9BU79 118 aa10.15□□□□□ -0.78
CSRP1-201ENST00000340006 MAP1LC3CQ9BXW4 147 aa10.15□□□□□ -0.78
CSRP1-201ENST00000340006 CYSLTR1Q9Y271 337 aa10.15□□□□□ -0.78
CSRP1-201ENST00000340006 LINC00588Q9Y4M8 146 aa10.15□□□□□ -0.78
CSRP1-201ENST00000340006 STARD9Q9P2P6 4700 aa10.15□□□□□ -0.78
CSRP1-201ENST00000340006 IFI27L1Q96BM0 104 aa10.15□□□□□ -0.78
CSRP1-201ENST00000340006 DYNC2H1Q8NCM8 4307 aaKnown RBP10.15□□□□□ -0.79
CSRP1-201ENST00000340006 TIRAPP58753 221 aa10.14□□□□□ -0.79
CSRP1-201ENST00000340006 RPL39P62891 51 aaKnown RBP10.14□□□□□ -0.79
CSRP1-201ENST00000340006 Q8N976 141 aa10.14□□□□□ -0.79
CSRP1-201ENST00000340006 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.14□□□□□ -0.79
CSRP1-201ENST00000340006 IGKV2-29A2NJV5 120 aaPredicted RBP10.14□□□□□ -0.79
CSRP1-201ENST00000340006 H0Y8G0 127 aa10.14□□□□□ -0.79
CSRP1-201ENST00000340006 SYS1-DBNDD2H3BUS1 97 aa10.14□□□□□ -0.79
CSRP1-201ENST00000340006 C20orf203Q8NBC4 194 aa10.14□□□□□ -0.79
CSRP1-201ENST00000340006 LYSTQ99698 3801 aa10.14□□□□□ -0.79
CSRP1-201ENST00000340006 CHCHD7Q9BUK0 85 aa10.14□□□□□ -0.79
CSRP1-201ENST00000340006 LINC01549A6NIU2 74 aa10.13□□□□□ -0.79
CSRP1-201ENST00000340006 CCL25O15444 150 aa10.13□□□□□ -0.79
CSRP1-201ENST00000340006 ATP5LO75964 103 aa10.13□□□□□ -0.79
CSRP1-201ENST00000340006 GAGE6Q13070 117 aa10.13□□□□□ -0.79
CSRP1-201ENST00000340006 SCGB3A1Q96QR1 104 aa10.13□□□□□ -0.79
CSRP1-201ENST00000340006 ERASQ7Z444 233 aa10.12□□□□□ -0.79
CSRP1-201ENST00000340006 MIEN1Q9BRT3 115 aa10.12□□□□□ -0.79
CSRP1-201ENST00000340006 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.12□□□□□ -0.79
CSRP1-201ENST00000340006 AMMECR1LQ6DCA0 310 aa10.12□□□□□ -0.79
CSRP1-201ENST00000340006 PLECQ15149 4684 aaKnown RBP10.11□□□□□ -0.79
CSRP1-201ENST00000340006 A0A087WX48 190 aa10.11□□□□□ -0.79
CSRP1-201ENST00000340006 DGAT2L7PQ6IED9 249 aa10.11□□□□□ -0.79
CSRP1-201ENST00000340006 SPATA12Q7Z6I5 190 aa10.11□□□□□ -0.79
CSRP1-201ENST00000340006 WFDC10BQ8IUB3 73 aa10.11□□□□□ -0.79
CSRP1-201ENST00000340006 MRPS16Q9Y3D3 137 aaKnown RBP10.11□□□□□ -0.79
CSRP1-201ENST00000340006 UBE2V1Q13404 147 aa10.1□□□□□ -0.79
CSRP1-201ENST00000340006 PET117Q6UWS5 81 aa10.1□□□□□ -0.79
CSRP1-201ENST00000340006 IGIPA6NJ69 53 aa10.1□□□□□ -0.79
CSRP1-201ENST00000340006 H7C423 109 aa10.1□□□□□ -0.79
CSRP1-201ENST00000340006 PRSS1P07477 247 aa10.1□□□□□ -0.79
CSRP1-201ENST00000340006 Q9H8V8 135 aa10.1□□□□□ -0.79
CSRP1-201ENST00000340006 SIVA1O15304 175 aa10.09□□□□□ -0.79
CSRP1-201ENST00000340006 Q6ZN92 141 aa10.09□□□□□ -0.79
CSRP1-201ENST00000340006 TEX43Q6ZNM6 134 aa10.09□□□□□ -0.79
CSRP1-201ENST00000340006 TMEM101Q96IK0 257 aa10.09□□□□□ -0.79
CSRP1-201ENST00000340006 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
CSRP1-201ENST00000340006 LY6G6CO95867 125 aa10.08□□□□□ -0.8
CSRP1-201ENST00000340006 IGHV3-30P01768 117 aa10.08□□□□□ -0.8
CSRP1-201ENST00000340006 IGHV3-33P01772 117 aa10.08□□□□□ -0.8
CSRP1-201ENST00000340006 IGHV3-30-3P0DP02 117 aa10.08□□□□□ -0.8
CSRP1-201ENST00000340006 IGHV3-30-5P0DP03 117 aa10.08□□□□□ -0.8
CSRP1-201ENST00000340006 FGF6P10767 208 aa10.08□□□□□ -0.8
CSRP1-201ENST00000340006 SMAGPQ0VAQ4 97 aa10.08□□□□□ -0.8
CSRP1-201ENST00000340006 TMEM141Q96I45 108 aa10.08□□□□□ -0.8
CSRP1-201ENST00000340006 PMCHL2Q9BQD1 86 aa10.08□□□□□ -0.8
CSRP1-201ENST00000340006 LINC01545Q5VT33 79 aa10.07□□□□□ -0.8
CSRP1-201ENST00000340006 LGALS9CQ6DKI2 356 aa10.07□□□□□ -0.8
CSRP1-201ENST00000340006 UPK3BQ9BT76 320 aa10.07□□□□□ -0.8
CSRP1-201ENST00000340006 MPV17L2Q567V2 206 aa10.06□□□□□ -0.8
CSRP1-201ENST00000340006 BAALCQ8WXS3 180 aa10.06□□□□□ -0.8
CSRP1-201ENST00000340006 UBE2D4Q9Y2X8 147 aa10.06□□□□□ -0.8
CSRP1-201ENST00000340006 PYGO1Q9Y3Y4 419 aa10.06□□□□□ -0.8
CSRP1-201ENST00000340006 Q8N3U1 123 aa10.06□□□□□ -0.8
CSRP1-201ENST00000340006 OR5A1Q8NGJ0 315 aa10.06□□□□□ -0.8
CSRP1-201ENST00000340006 ANGP03950 147 aaKnown RBP10.05□□□□□ -0.8
CSRP1-201ENST00000340006 ODF1Q14990 250 aa10.05□□□□□ -0.8
CSRP1-201ENST00000340006 ATOH7Q8N100 152 aa10.05□□□□□ -0.8
CSRP1-201ENST00000340006 OPRPNQ99935 248 aaPredicted RBP10.05□□□□□ -0.8
CSRP1-201ENST00000340006 SPANXA1Q9NS26 97 aa10.05□□□□□ -0.8
CSRP1-201ENST00000340006 TRAV9-2A0A087WT02 112 aa10.05□□□□□ -0.8
CSRP1-201ENST00000340006 A0A1B0GUV1 79 aa10.05□□□□□ -0.8
CSRP1-201ENST00000340006 RNF151Q2KHN1 245 aa10.05□□□□□ -0.8
CSRP1-201ENST00000340006 VPS25Q9BRG1 176 aa10.05□□□□□ -0.8
CSRP1-201ENST00000340006 IGLV4-60A0A075B6I1 120 aa10.04□□□□□ -0.8
CSRP1-201ENST00000340006 IGLV4-3A0A075B6K6 122 aa10.04□□□□□ -0.8
CSRP1-201ENST00000340006 TRAV12-1A0A0B4J245 112 aa10.04□□□□□ -0.8
CSRP1-201ENST00000340006 LINC01556Q5JQF7 62 aa10.04□□□□□ -0.8
CSRP1-201ENST00000340006 KLK12Q9UKR0 248 aa10.04□□□□□ -0.8
CSRP1-201ENST00000340006 DNAH10OSP0CZ25 163 aa10.03□□□□□ -0.8
CSRP1-201ENST00000340006 VAMP8Q9BV40 100 aa10.03□□□□□ -0.8
CSRP1-201ENST00000340006 TIMM21Q9BVV7 248 aa10.03□□□□□ -0.8
CSRP1-201ENST00000340006 PRSS29PA6NIE9 313 aa10.03□□□□□ -0.8
CSRP1-201ENST00000340006 PAPPA-AS1Q5QFB9 102 aa10.03□□□□□ -0.8
CSRP1-201ENST00000340006 ZC2HC1BQ5TFG8 222 aa10.03□□□□□ -0.8
CSRP1-201ENST00000340006 FAM104AQ969W3 186 aa10.03□□□□□ -0.8
CSRP1-201ENST00000340006 PAM16Q9Y3D7 125 aa10.03□□□□□ -0.8
CSRP1-201ENST00000340006 CSDC2Q9Y534 153 aaKnown RBP10.03□□□□□ -0.8
CSRP1-201ENST00000340006 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
CSRP1-201ENST00000340006 PMVKQ15126 192 aa10.02□□□□□ -0.81
CSRP1-201ENST00000340006 RNASE13Q5GAN3 156 aaKnown RBP10.02□□□□□ -0.81
CSRP1-201ENST00000340006 LINC00269Q8N2A0 174 aa10.02□□□□□ -0.81
CSRP1-201ENST00000340006 LINC00476Q8WZB0 136 aa10.02□□□□□ -0.81
CSRP1-201ENST00000340006 VCX2Q9H322 139 aa10.02□□□□□ -0.81
CSRP1-201ENST00000340006 CDC42SE2Q9NRR3 84 aa10.02□□□□□ -0.81
CSRP1-201ENST00000340006 MRPL35Q9NZE8 188 aaKnown RBP10.02□□□□□ -0.81
CSRP1-201ENST00000340006 Q6ZUT4 128 aa10.01□□□□□ -0.81
CSRP1-201ENST00000340006 CST9LQ9H4G1 147 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms