RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 GATA3P23771 443 aa6.61□□□□□ -1.35
RTN3-202ENST00000339997 NDUFV3P56181 108 aaKnown RBP6.61□□□□□ -1.35
RTN3-202ENST00000339997 C20orf197Q8N268 126 aa6.61□□□□□ -1.35
RTN3-202ENST00000339997 MLST8Q9BVC4 326 aa6.61□□□□□ -1.35
RTN3-202ENST00000339997 A0A0B4J2C4 111 aa6.61□□□□□ -1.35
RTN3-202ENST00000339997 HIGD2BQ4VC39 106 aa6.61□□□□□ -1.35
RTN3-202ENST00000339997 PIK3CD-AS1Q5SR53 167 aa6.61□□□□□ -1.35
RTN3-202ENST00000339997 A0A0U1RQV1 116 aa6.6□□□□□ -1.35
RTN3-202ENST00000339997 PSMB8P28062 276 aa6.6□□□□□ -1.35
RTN3-202ENST00000339997 PROK1P58294 105 aa6.6□□□□□ -1.35
RTN3-202ENST00000339997 ZNF469Q96JG9 3925 aaPredicted RBP6.6□□□□□ -1.35
RTN3-202ENST00000339997 CCL24O00175 119 aa6.6□□□□□ -1.35
RTN3-202ENST00000339997 NFE4Q86UQ8 179 aa6.6□□□□□ -1.35
RTN3-202ENST00000339997 CDKN2A-AS1Q9UH64 79 aa6.6□□□□□ -1.35
RTN3-202ENST00000339997 MPLKIPQ8TAP9 179 aa6.6□□□□□ -1.35
RTN3-202ENST00000339997 KLK5Q9Y337 293 aaPredicted RBP6.6□□□□□ -1.35
RTN3-202ENST00000339997 A0A096LNI7 61 aa6.6□□□□□ -1.35
RTN3-202ENST00000339997 LINC00310P59036 64 aa6.6□□□□□ -1.35
RTN3-202ENST00000339997 C20orf203Q8NBC4 194 aa6.6□□□□□ -1.35
RTN3-202ENST00000339997 LENEPQ9Y5L5 61 aa6.59□□□□□ -1.35
RTN3-202ENST00000339997 H3BQ85 93 aa6.59□□□□□ -1.35
RTN3-202ENST00000339997 IGLC6P0CF74 106 aa6.59□□□□□ -1.35
RTN3-202ENST00000339997 PIFOQ8TCI5 191 aa6.59□□□□□ -1.35
RTN3-202ENST00000339997 IL17DQ8TAD2 202 aa6.59□□□□□ -1.35
RTN3-202ENST00000339997 C9orf47Q6ZRZ4 202 aa6.59□□□□□ -1.36
RTN3-202ENST00000339997 C2orf91Q6ZV80 131 aa6.59□□□□□ -1.36
RTN3-202ENST00000339997 C5orf56Q8N8D9 126 aa6.59□□□□□ -1.36
RTN3-202ENST00000339997 ATP6V0E2Q8NHE4 81 aa6.59□□□□□ -1.36
RTN3-202ENST00000339997 DSCAMO60469 2012 aa6.59□□□□□ -1.36
RTN3-202ENST00000339997 A0A0J9YXY3 114 aa6.58□□□□□ -1.36
RTN3-202ENST00000339997 ELANEP08246 267 aa6.58□□□□□ -1.36
RTN3-202ENST00000339997 PLA2G2CQ5R387 149 aa6.58□□□□□ -1.36
RTN3-202ENST00000339997 KLK12Q9UKR0 248 aa6.58□□□□□ -1.36
RTN3-202ENST00000339997 TRBV7-3A0A075B6L6 115 aa6.58□□□□□ -1.36
RTN3-202ENST00000339997 H0YGX0 51 aa6.58□□□□□ -1.36
RTN3-202ENST00000339997 DAZ2Q13117 558 aaKnown RBP6.58□□□□□ -1.36
RTN3-202ENST00000339997 DAZ4Q86SG3 579 aaKnown RBP6.58□□□□□ -1.36
RTN3-202ENST00000339997 DAZ3Q9NR90 486 aaKnown RBP6.58□□□□□ -1.36
RTN3-202ENST00000339997 C10orf99Q6UWK7 81 aa6.58□□□□□ -1.36
RTN3-202ENST00000339997 IGHV1-58A0A0C4DH39 117 aa6.58□□□□□ -1.36
RTN3-202ENST00000339997 ATOX1O00244 68 aa6.58□□□□□ -1.36
RTN3-202ENST00000339997 CCDC140Q96MF4 163 aa6.58□□□□□ -1.36
RTN3-202ENST00000339997 SIRPDQ9H106 197 aa6.57□□□□□ -1.36
RTN3-202ENST00000339997 VPREB3Q9UKI3 123 aa6.57□□□□□ -1.36
RTN3-202ENST00000339997 J3KT08 172 aa6.57□□□□□ -1.36
RTN3-202ENST00000339997 DEFB135Q30KP9 77 aa6.57□□□□□ -1.36
RTN3-202ENST00000339997 K7EQD1 137 aa6.57□□□□□ -1.36
RTN3-202ENST00000339997 LINC00526Q96FQ7 95 aa6.57□□□□□ -1.36
RTN3-202ENST00000339997 TRIAP1O43715 76 aa6.56□□□□□ -1.36
RTN3-202ENST00000339997 XGP55808 180 aa6.56□□□□□ -1.36
RTN3-202ENST00000339997 ADAMTS9Q9P2N4 1935 aa6.56□□□□□ -1.36
RTN3-202ENST00000339997 COX7A2LO14548 114 aa6.56□□□□□ -1.36
RTN3-202ENST00000339997 Q6ZS46 218 aa6.56□□□□□ -1.36
RTN3-202ENST00000339997 Q6ZTI0 123 aa6.56□□□□□ -1.36
RTN3-202ENST00000339997 Q8N976 141 aa6.56□□□□□ -1.36
RTN3-202ENST00000339997 EPG5Q9HCE0 2579 aa6.56□□□□□ -1.36
RTN3-202ENST00000339997 MRPS12O15235 138 aaKnown RBP6.56□□□□□ -1.36
RTN3-202ENST00000339997 SPART-AS1P0CW21 52 aa6.56□□□□□ -1.36
RTN3-202ENST00000339997 CRYBG3Q68DQ2 2970 aa6.56□□□□□ -1.36
RTN3-202ENST00000339997 LRCOL1A6NCL2 159 aa6.56□□□□□ -1.36
RTN3-202ENST00000339997 CCDC179H3BU77 68 aa6.56□□□□□ -1.36
RTN3-202ENST00000339997 C20orf173Q96LM9 149 aa6.56□□□□□ -1.36
RTN3-202ENST00000339997 J3QKU1 62 aa6.55□□□□□ -1.36
RTN3-202ENST00000339997 AGRNO00468 2067 aa6.55□□□□□ -1.36
RTN3-202ENST00000339997 B9D2Q9BPU9 175 aa6.55□□□□□ -1.36
RTN3-202ENST00000339997 LINC00467Q9BRT7 94 aa6.55□□□□□ -1.36
RTN3-202ENST00000339997 SRSF2Q01130 221 aaKnown RBP6.55□□□□□ -1.36
RTN3-202ENST00000339997 PRR4Q16378 134 aa6.55□□□□□ -1.36
RTN3-202ENST00000339997 HHLA3Q9XRX5 114 aa6.55□□□□□ -1.36
RTN3-202ENST00000339997 H3BT86 120 aa6.54□□□□□ -1.36
RTN3-202ENST00000339997 RNF152Q8N8N0 203 aa6.54□□□□□ -1.36
RTN3-202ENST00000339997 NEXN-AS1Q8NBZ9 246 aa6.54□□□□□ -1.36
RTN3-202ENST00000339997 C11orf21Q9P2W6 132 aa6.54□□□□□ -1.36
RTN3-202ENST00000339997 DCANP1Q8TF63 244 aa6.54□□□□□ -1.36
RTN3-202ENST00000339997 XAGE1AQ9HD64 81 aa6.54□□□□□ -1.36
RTN3-202ENST00000339997 POM121L12Q8N7R1 296 aa6.54□□□□□ -1.36
RTN3-202ENST00000339997 A0A0J9YX75 114 aa6.54□□□□□ -1.36
RTN3-202ENST00000339997 NDUFA1O15239 70 aa6.54□□□□□ -1.36
RTN3-202ENST00000339997 FLNBO75369 2602 aaKnown RBP6.54□□□□□ -1.36
RTN3-202ENST00000339997 ZNF22P17026 224 aaPredicted RBP6.54□□□□□ -1.36
RTN3-202ENST00000339997 ENHOQ6UWT2 76 aa6.54□□□□□ -1.36
RTN3-202ENST00000339997 Q6ZSV7 163 aa6.54□□□□□ -1.36
RTN3-202ENST00000339997 JMJD7-PLA2G4BH0Y9G9 81 aa6.53□□□□□ -1.36
RTN3-202ENST00000339997 RNF185Q96GF1 192 aa6.53□□□□□ -1.36
RTN3-202ENST00000339997 TACC2O95359 2948 aa6.53□□□□□ -1.36
RTN3-202ENST00000339997 ADORA2A-AS1P86434 159 aa6.53□□□□□ -1.36
RTN3-202ENST00000339997 FAM110AQ9BQ89 295 aa6.53□□□□□ -1.36
RTN3-202ENST00000339997 NUP210LQ5VU65 1888 aa6.53□□□□□ -1.36
RTN3-202ENST00000339997 SPAG11BQ08648 103 aa6.53□□□□□ -1.36
RTN3-202ENST00000339997 MIAQ16674 131 aa6.53□□□□□ -1.36
RTN3-202ENST00000339997 SMAD5-AS1Q9Y6J3 95 aa6.53□□□□□ -1.36
RTN3-202ENST00000339997 PDE6GP18545 87 aa6.53□□□□□ -1.36
RTN3-202ENST00000339997 C10orf105Q8TEF2 133 aa6.53□□□□□ -1.36
RTN3-202ENST00000339997 HIGD2AQ9BW72 106 aa6.53□□□□□ -1.36
RTN3-202ENST00000339997 IGLV2-11P01706 119 aa6.52□□□□□ -1.37
RTN3-202ENST00000339997 LINC00643Q86TS7 51 aa6.52□□□□□ -1.37
RTN3-202ENST00000339997 LINC00269Q8N2A0 174 aa6.52□□□□□ -1.37
RTN3-202ENST00000339997 URB1-AS1Q96HZ7 61 aa6.52□□□□□ -1.37
RTN3-202ENST00000339997 PRYO14603 147 aa6.52□□□□□ -1.37
RTN3-202ENST00000339997 C14orf177Q52M58 125 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms