RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 TRGV1A0A0A0MS02 117 aa11.74□□□□□ -0.53
LITAF-201ENST00000339430 A4D1N5 150 aa11.74□□□□□ -0.53
LITAF-201ENST00000339430 RS1O15537 224 aa11.74□□□□□ -0.53
LITAF-201ENST00000339430 BEAN1Q3B7T3 259 aa11.74□□□□□ -0.53
LITAF-201ENST00000339430 PRIMA1Q86XR5 153 aa11.74□□□□□ -0.53
LITAF-201ENST00000339430 PTH2Q96A98 100 aa11.74□□□□□ -0.53
LITAF-201ENST00000339430 CITED1Q99966 193 aa11.74□□□□□ -0.53
LITAF-201ENST00000339430 A8MZ25 164 aa11.74□□□□□ -0.53
LITAF-201ENST00000339430 PF4P02776 101 aa11.74□□□□□ -0.53
LITAF-201ENST00000339430 COTL1Q14019 142 aa11.73□□□□□ -0.53
LITAF-201ENST00000339430 MUSTN1Q8IVN3 82 aa11.73□□□□□ -0.53
LITAF-201ENST00000339430 FBN1P35555 2871 aaKnown RBP11.72□□□□□ -0.53
LITAF-201ENST00000339430 A0A0J9YXY3 114 aa11.72□□□□□ -0.53
LITAF-201ENST00000339430 SPINK8P0C7L1 97 aa11.72□□□□□ -0.53
LITAF-201ENST00000339430 UBE2D3P61077 147 aa11.72□□□□□ -0.53
LITAF-201ENST00000339430 UBE2D2P62837 147 aa11.72□□□□□ -0.53
LITAF-201ENST00000339430 PRO1854Q9UHT4 67 aa11.72□□□□□ -0.53
LITAF-201ENST00000339430 VWFP04275 2813 aa11.71□□□□□ -0.53
LITAF-201ENST00000339430 TRAV25A0A0B4J276 109 aa11.71□□□□□ -0.53
LITAF-201ENST00000339430 EIF4EBP3O60516 100 aaPredicted RBP11.71□□□□□ -0.53
LITAF-201ENST00000339430 DNAJC30Q96LL9 226 aa11.71□□□□□ -0.53
LITAF-201ENST00000339430 SPANXA1Q9NS26 97 aa11.71□□□□□ -0.53
LITAF-201ENST00000339430 H7C2G1 150 aa11.71□□□□□ -0.54
LITAF-201ENST00000339430 INSL3P51460 131 aa11.71□□□□□ -0.54
LITAF-201ENST00000339430 WFDC10AQ9H1F0 79 aa11.71□□□□□ -0.54
LITAF-201ENST00000339430 TCL1BO95988 128 aa11.7□□□□□ -0.54
LITAF-201ENST00000339430 SMCPP49901 116 aaPredicted RBP11.7□□□□□ -0.54
LITAF-201ENST00000339430 Q6ZTI0 123 aa11.7□□□□□ -0.54
LITAF-201ENST00000339430 LINC00482Q8N8I6 264 aa11.7□□□□□ -0.54
LITAF-201ENST00000339430 IGHV1-58A0A0C4DH39 117 aa11.69□□□□□ -0.54
LITAF-201ENST00000339430 TMEM238C9JI98 176 aa11.69□□□□□ -0.54
LITAF-201ENST00000339430 CRYBA4P53673 196 aa11.69□□□□□ -0.54
LITAF-201ENST00000339430 CLUHP3Q96NS8 147 aa11.69□□□□□ -0.54
LITAF-201ENST00000339430 TINCRA0A1B0GVN0 87 aa11.69□□□□□ -0.54
LITAF-201ENST00000339430 SCGB1C2P0DMR2 95 aa11.69□□□□□ -0.54
LITAF-201ENST00000339430 GEMIN7Q9H840 131 aaKnown RBP11.68□□□□□ -0.54
LITAF-201ENST00000339430 DGAT2L7PQ6IED9 249 aa11.68□□□□□ -0.54
LITAF-201ENST00000339430 IL17DQ8TAD2 202 aa11.68□□□□□ -0.54
LITAF-201ENST00000339430 NDUFA12Q9UI09 145 aa11.68□□□□□ -0.54
LITAF-201ENST00000339430 PRSS2P07478 247 aa11.67□□□□□ -0.54
LITAF-201ENST00000339430 NPC2P61916 151 aa11.67□□□□□ -0.54
LITAF-201ENST00000339430 TMEM263Q8WUH6 116 aaKnown RBP11.67□□□□□ -0.54
LITAF-201ENST00000339430 VSIG2Q96IQ7 327 aa11.67□□□□□ -0.54
LITAF-201ENST00000339430 SPATA3Q8NHX4 192 aa11.67□□□□□ -0.54
LITAF-201ENST00000339430 LINC00694P0DN24 101 aa11.66□□□□□ -0.54
LITAF-201ENST00000339430 RPL35AP18077 110 aaKnown RBP11.66□□□□□ -0.54
LITAF-201ENST00000339430 ADAMTSL4-AS1Q5T5F5 129 aa11.66□□□□□ -0.54
LITAF-201ENST00000339430 LYRM7Q5U5X0 104 aa11.66□□□□□ -0.54
LITAF-201ENST00000339430 LITAFQ99732 161 aa11.66□□□□□ -0.54
LITAF-201ENST00000339430 NOP10Q9NPE3 64 aaKnown RBP11.66□□□□□ -0.54
LITAF-201ENST00000339430 CDKN2A-AS1Q9UH64 79 aa11.66□□□□□ -0.54
LITAF-201ENST00000339430 STAB1Q9NY15 2570 aa11.66□□□□□ -0.54
LITAF-201ENST00000339430 IGLV1-51P01701 117 aa11.65□□□□□ -0.54
LITAF-201ENST00000339430 IGHV3-33P01772 117 aa11.65□□□□□ -0.54
LITAF-201ENST00000339430 J3QR89 54 aa11.65□□□□□ -0.54
LITAF-201ENST00000339430 COX6A2Q02221 97 aa11.64□□□□□ -0.55
LITAF-201ENST00000339430 ERG28Q9UKR5 140 aa11.64□□□□□ -0.55
LITAF-201ENST00000339430 GAGE12JA6NER3 117 aa11.64□□□□□ -0.55
LITAF-201ENST00000339430 K7EQD1 137 aa11.64□□□□□ -0.55
LITAF-201ENST00000339430 GIG44P09565 113 aaPredicted RBP11.64□□□□□ -0.55
LITAF-201ENST00000339430 GAGE4Q13068 117 aa11.64□□□□□ -0.55
LITAF-201ENST00000339430 GAGE5Q13069 117 aa11.64□□□□□ -0.55
LITAF-201ENST00000339430 Q1RN00 199 aa11.64□□□□□ -0.55
LITAF-201ENST00000339430 RPL36AP83881 106 aaKnown RBP11.63□□□□□ -0.55
LITAF-201ENST00000339430 C3orf56Q8N813 242 aa11.63□□□□□ -0.55
LITAF-201ENST00000339430 RPL36ALQ969Q0 106 aaKnown RBP11.63□□□□□ -0.55
LITAF-201ENST00000339430 GTSF1LQ9H1H1 148 aa11.63□□□□□ -0.55
LITAF-201ENST00000339430 COL6A5A8TX70 2615 aa11.63□□□□□ -0.55
LITAF-201ENST00000339430 A0A0B4J2C4 111 aa11.63□□□□□ -0.55
LITAF-201ENST00000339430 GAGE12HA6NDE8 117 aa11.62□□□□□ -0.55
LITAF-201ENST00000339430 NTM-AS1Q6ZSK4 140 aa11.62□□□□□ -0.55
LITAF-201ENST00000339430 C1QTNF4Q9BXJ3 329 aa11.62□□□□□ -0.55
LITAF-201ENST00000339430 TRBV20-1A0A075B6N2 111 aa11.62□□□□□ -0.55
LITAF-201ENST00000339430 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.61□□□□□ -0.55
LITAF-201ENST00000339430 GAGE7O76087 117 aa11.61□□□□□ -0.55
LITAF-201ENST00000339430 GAGE12FP0CL80 117 aa11.61□□□□□ -0.55
LITAF-201ENST00000339430 GAGE12GP0CL81 117 aa11.61□□□□□ -0.55
LITAF-201ENST00000339430 GAGE12IP0CL82 117 aa11.61□□□□□ -0.55
LITAF-201ENST00000339430 FOXI1Q12951 378 aa11.61□□□□□ -0.55
LITAF-201ENST00000339430 DAND5Q8N907 189 aa11.61□□□□□ -0.55
LITAF-201ENST00000339430 TRAV4A0A0B4J268 109 aa11.61□□□□□ -0.55
LITAF-201ENST00000339430 TMEM101Q96IK0 257 aa11.61□□□□□ -0.55
LITAF-201ENST00000339430 TRRAPQ9Y4A5 3859 aa11.61□□□□□ -0.55
LITAF-201ENST00000339430 ZFAND6Q6FIF0 208 aa11.6□□□□□ -0.55
LITAF-201ENST00000339430 TRAV13-1A0A0B4J241 112 aa11.6□□□□□ -0.55
LITAF-201ENST00000339430 TRGV2A0A075B6R0 118 aa11.59□□□□□ -0.55
LITAF-201ENST00000339430 LOC100131303A0A0U1RQF7 123 aa11.59□□□□□ -0.55
LITAF-201ENST00000339430 TIRAPP58753 221 aa11.59□□□□□ -0.55
LITAF-201ENST00000339430 MIAQ16674 131 aa11.59□□□□□ -0.55
LITAF-201ENST00000339430 LINC00242Q5T6M2 205 aa11.59□□□□□ -0.55
LITAF-201ENST00000339430 SPANXDQ9BXN6 97 aa11.59□□□□□ -0.55
LITAF-201ENST00000339430 SPANXCQ9NY87 97 aa11.59□□□□□ -0.55
LITAF-201ENST00000339430 PLAC8L1A1L4L8 177 aa11.59□□□□□ -0.55
LITAF-201ENST00000339430 TRBV10-1A0A0K0K1A3 114 aa11.58□□□□□ -0.56
LITAF-201ENST00000339430 DAZ2Q13117 558 aaKnown RBP11.58□□□□□ -0.56
LITAF-201ENST00000339430 DAZ4Q86SG3 579 aaKnown RBP11.58□□□□□ -0.56
LITAF-201ENST00000339430 ZNF625Q96I27 306 aaPredicted RBP11.58□□□□□ -0.56
LITAF-201ENST00000339430 DAZ3Q9NR90 486 aaKnown RBP11.58□□□□□ -0.56
LITAF-201ENST00000339430 C19orf73Q9NVV2 129 aa11.58□□□□□ -0.56
LITAF-201ENST00000339430 IGLV5-45A0A087WSX0 123 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms