RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 SCGB1D4Q6XE38 83 aa9.29□□□□□ -0.92
CDK5RAP1-201ENST00000339269 Q6ZUT4 128 aa9.29□□□□□ -0.92
CDK5RAP1-201ENST00000339269 SLC25A29Q8N8R3 303 aa9.29□□□□□ -0.92
CDK5RAP1-201ENST00000339269 SPANXB1Q9NS25 103 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP1-201ENST00000339269 IGHV3-30P01768 117 aa9.28□□□□□ -0.92
CDK5RAP1-201ENST00000339269 IGHV3-30-5P0DP03 117 aa9.28□□□□□ -0.92
CDK5RAP1-201ENST00000339269 CSNK1G2-AS1Q8NCQ2 148 aa9.28□□□□□ -0.92
CDK5RAP1-201ENST00000339269 TENM1Q9UKZ4 2725 aa9.28□□□□□ -0.92
CDK5RAP1-201ENST00000339269 TRGV1A0A0A0MS02 117 aa9.28□□□□□ -0.92
CDK5RAP1-201ENST00000339269 C10orf126Q8N4M7 172 aa9.28□□□□□ -0.92
CDK5RAP1-201ENST00000339269 TMEM263Q8WUH6 116 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP1-201ENST00000339269 SPANXA1Q9NS26 97 aa9.28□□□□□ -0.92
CDK5RAP1-201ENST00000339269 NOTCH3Q9UM47 2321 aa9.27□□□□□ -0.92
CDK5RAP1-201ENST00000339269 IGHV3-64A0A075B6Q5 118 aa9.27□□□□□ -0.93
CDK5RAP1-201ENST00000339269 EIF4EBP3O60516 100 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP1-201ENST00000339269 CKS1BP61024 79 aa9.26□□□□□ -0.93
CDK5RAP1-201ENST00000339269 G3V4G9 280 aa9.25□□□□□ -0.93
CDK5RAP1-201ENST00000339269 WIPF1O43516 503 aa9.25□□□□□ -0.93
CDK5RAP1-201ENST00000339269 LGALS3P17931 250 aaKnown RBP9.25□□□□□ -0.93
CDK5RAP1-201ENST00000339269 NTM-AS1Q6ZSK4 140 aa9.25□□□□□ -0.93
CDK5RAP1-201ENST00000339269 TRAV4A0A0B4J268 109 aa9.25□□□□□ -0.93
CDK5RAP1-201ENST00000339269 RPL35AP18077 110 aaKnown RBP9.25□□□□□ -0.93
CDK5RAP1-201ENST00000339269 DAZ2Q13117 558 aaKnown RBP9.25□□□□□ -0.93
CDK5RAP1-201ENST00000339269 SRSF9Q13242 221 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDK5RAP1-201ENST00000339269 TRAV8-3A0A0A6YYJ7 113 aa9.24□□□□□ -0.93
CDK5RAP1-201ENST00000339269 TINCRA0A1B0GVN0 87 aa9.24□□□□□ -0.93
CDK5RAP1-201ENST00000339269 LINC00694P0DN24 101 aa9.24□□□□□ -0.93
CDK5RAP1-201ENST00000339269 IGHV3-30-3P0DP02 117 aa9.24□□□□□ -0.93
CDK5RAP1-201ENST00000339269 LITAFQ99732 161 aa9.24□□□□□ -0.93
CDK5RAP1-201ENST00000339269 NOP10Q9NPE3 64 aaKnown RBP9.24□□□□□ -0.93
CDK5RAP1-201ENST00000339269 K7EQD1 137 aa9.23□□□□□ -0.93
CDK5RAP1-201ENST00000339269 CFC1BP0CG36 223 aa9.23□□□□□ -0.93
CDK5RAP1-201ENST00000339269 CFC1P0CG37 223 aa9.23□□□□□ -0.93
CDK5RAP1-201ENST00000339269 SBSPONQ8IVN8 264 aa9.23□□□□□ -0.93
CDK5RAP1-201ENST00000339269 SPATA3Q8NHX4 192 aa9.23□□□□□ -0.93
CDK5RAP1-201ENST00000339269 PRO0461Q9UI25 63 aa9.23□□□□□ -0.93
CDK5RAP1-201ENST00000339269 CMC4P56277 68 aaPredicted RBP9.23□□□□□ -0.93
CDK5RAP1-201ENST00000339269 NDUFA11Q86Y39 141 aa9.23□□□□□ -0.93
CDK5RAP1-201ENST00000339269 TIMM21Q9BVV7 248 aa9.23□□□□□ -0.93
CDK5RAP1-201ENST00000339269 DNHD1Q96M86 4753 aa9.23□□□□□ -0.93
CDK5RAP1-201ENST00000339269 A0A0J9YXY3 114 aa9.22□□□□□ -0.93
CDK5RAP1-201ENST00000339269 TRBV10-1A0A0K0K1A3 114 aa9.22□□□□□ -0.93
CDK5RAP1-201ENST00000339269 A8MZ25 164 aa9.22□□□□□ -0.93
CDK5RAP1-201ENST00000339269 UBE2D3P61077 147 aa9.22□□□□□ -0.93
CDK5RAP1-201ENST00000339269 UBE2D2P62837 147 aa9.22□□□□□ -0.93
CDK5RAP1-201ENST00000339269 LINC00482Q8N8I6 264 aa9.22□□□□□ -0.93
CDK5RAP1-201ENST00000339269 IGLV5-45A0A087WSX0 123 aa9.21□□□□□ -0.93
CDK5RAP1-201ENST00000339269 IGHV1-58A0A0C4DH39 117 aa9.21□□□□□ -0.93
CDK5RAP1-201ENST00000339269 OVOL2Q9BRP0 275 aa9.21□□□□□ -0.93
CDK5RAP1-201ENST00000339269 C16orf74Q96GX8 76 aa9.21□□□□□ -0.94
CDK5RAP1-201ENST00000339269 VSIG2Q96IQ7 327 aa9.21□□□□□ -0.94
CDK5RAP1-201ENST00000339269 VWFP04275 2813 aa9.21□□□□□ -0.94
CDK5RAP1-201ENST00000339269 H3BMG7 143 aa9.2□□□□□ -0.94
CDK5RAP1-201ENST00000339269 COX6A2Q02221 97 aa9.2□□□□□ -0.94
CDK5RAP1-201ENST00000339269 ANK2Q01484 3957 aa9.2□□□□□ -0.94
CDK5RAP1-201ENST00000339269 LOC100131303A0A0U1RQF7 123 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 GAGE12JA6NER3 117 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 APOMO95445 188 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 SPINK8P0C7L1 97 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 GAGE4Q13068 117 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 GAGE5Q13069 117 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 WFDC2Q14508 124 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 GAGE13Q4V321 117 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 GAGE7O76087 117 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 GAGE12FP0CL80 117 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 GAGE12GP0CL81 117 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 GAGE12IP0CL82 117 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 RPL36AP83881 106 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 C5orf47Q569G3 176 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 C3orf56Q8N813 242 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 RPL36ALQ969Q0 106 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 SIGMAR1Q99720 223 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 CDKN2A-AS1Q9UH64 79 aa9.19□□□□□ -0.94
CDK5RAP1-201ENST00000339269 TIRAPP58753 221 aa9.18□□□□□ -0.94
CDK5RAP1-201ENST00000339269 ADAMTSL4-AS1Q5T5F5 129 aa9.18□□□□□ -0.94
CDK5RAP1-201ENST00000339269 FAM19A3Q7Z5A8 133 aa9.18□□□□□ -0.94
CDK5RAP1-201ENST00000339269 DAZ4Q86SG3 579 aaKnown RBP9.18□□□□□ -0.94
CDK5RAP1-201ENST00000339269 MUSTN1Q8IVN3 82 aa9.18□□□□□ -0.94
CDK5RAP1-201ENST00000339269 DAZ3Q9NR90 486 aaKnown RBP9.18□□□□□ -0.94
CDK5RAP1-201ENST00000339269 LINC00242Q5T6M2 205 aa9.17□□□□□ -0.94
CDK5RAP1-201ENST00000339269 CSDC2Q9Y534 153 aaKnown RBP9.17□□□□□ -0.94
CDK5RAP1-201ENST00000339269 NDUFA12Q9UI09 145 aa9.17□□□□□ -0.94
CDK5RAP1-201ENST00000339269 IGLV5-39A0A0G2JS06 123 aa9.16□□□□□ -0.94
CDK5RAP1-201ENST00000339269 TEX48A0A1B0GUV7 120 aa9.16□□□□□ -0.94
CDK5RAP1-201ENST00000339269 SMCPP49901 116 aaPredicted RBP9.16□□□□□ -0.94
CDK5RAP1-201ENST00000339269 ZFAND6Q6FIF0 208 aa9.16□□□□□ -0.94
CDK5RAP1-201ENST00000339269 SFTA2Q6UW10 78 aa9.16□□□□□ -0.94
CDK5RAP1-201ENST00000339269 TMEM101Q96IK0 257 aa9.16□□□□□ -0.94
CDK5RAP1-201ENST00000339269 C1QTNF4Q9BXJ3 329 aa9.16□□□□□ -0.94
CDK5RAP1-201ENST00000339269 F8W1H4 67 aa9.15□□□□□ -0.94
CDK5RAP1-201ENST00000339269 FHL2Q14192 279 aa9.15□□□□□ -0.94
CDK5RAP1-201ENST00000339269 GEMIN7Q9H840 131 aaKnown RBP9.15□□□□□ -0.94
CDK5RAP1-201ENST00000339269 CDC42SE2Q9NRR3 84 aa9.15□□□□□ -0.94
CDK5RAP1-201ENST00000339269 TRBV6-4A0A1B0GX49 114 aa9.15□□□□□ -0.95
CDK5RAP1-201ENST00000339269 IGHV3-33P01772 117 aa9.15□□□□□ -0.95
CDK5RAP1-201ENST00000339269 LINC00612Q8N6U2 182 aa9.15□□□□□ -0.95
CDK5RAP1-201ENST00000339269 GTSF1LQ9H1H1 148 aa9.15□□□□□ -0.95
CDK5RAP1-201ENST00000339269 TRGV2A0A075B6R0 118 aa9.14□□□□□ -0.95
CDK5RAP1-201ENST00000339269 A0A0B4J2C4 111 aa9.14□□□□□ -0.95
CDK5RAP1-201ENST00000339269 SPANXDQ9BXN6 97 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms