RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 LINC00694P0DN24 101 aa16.53■□□□□ 0.24
CLPTM1-201ENST00000337392 SLC25A29Q8N8R3 303 aa16.53■□□□□ 0.24
CLPTM1-201ENST00000337392 TMEM263Q8WUH6 116 aaKnown RBP16.53■□□□□ 0.24
CLPTM1-201ENST00000337392 GAGE12JA6NER3 117 aa16.52■□□□□ 0.24
CLPTM1-201ENST00000337392 GAGE4Q13068 117 aa16.52■□□□□ 0.24
CLPTM1-201ENST00000337392 GAGE5Q13069 117 aa16.52■□□□□ 0.24
CLPTM1-201ENST00000337392 ETDBQ3ZM63 59 aa16.52■□□□□ 0.24
CLPTM1-201ENST00000337392 GAGE13Q4V321 117 aa16.52■□□□□ 0.24
CLPTM1-201ENST00000337392 LINC00482Q8N8I6 264 aa16.52■□□□□ 0.24
CLPTM1-201ENST00000337392 UBE2D4Q9Y2X8 147 aa16.52■□□□□ 0.24
CLPTM1-201ENST00000337392 FBN1P35555 2871 aaKnown RBP16.52■□□□□ 0.23
CLPTM1-201ENST00000337392 RNF183Q96D59 192 aa16.51■□□□□ 0.23
CLPTM1-201ENST00000337392 SRSF9Q13242 221 aaKnown RBP eCLIP16.51■□□□□ 0.23
CLPTM1-201ENST00000337392 CSNK1G2-AS1Q8NCQ2 148 aa16.51■□□□□ 0.23
CLPTM1-201ENST00000337392 AMELXQ99217 191 aa16.51■□□□□ 0.23
CLPTM1-201ENST00000337392 EDA2RQ9HAV5 297 aa16.51■□□□□ 0.23
CLPTM1-201ENST00000337392 J3QQQ9 107 aa16.5■□□□□ 0.23
CLPTM1-201ENST00000337392 RHODO00212 210 aa16.5■□□□□ 0.23
CLPTM1-201ENST00000337392 C12orf74Q32Q52 190 aa16.5■□□□□ 0.23
CLPTM1-201ENST00000337392 TMEM223A0PJW6 202 aa16.49■□□□□ 0.23
CLPTM1-201ENST00000337392 HERVK_113P61574 105 aa16.49■□□□□ 0.23
CLPTM1-201ENST00000337392 TRGV2A0A075B6R0 118 aa16.49■□□□□ 0.23
CLPTM1-201ENST00000337392 NFE4Q86UQ8 179 aa16.49■□□□□ 0.23
CLPTM1-201ENST00000337392 A0A0J9YY99 117 aa16.49■□□□□ 0.23
CLPTM1-201ENST00000337392 MTURNQ8N3F0 131 aa16.49■□□□□ 0.23
CLPTM1-201ENST00000337392 NTM-AS1Q6ZSK4 140 aa16.48■□□□□ 0.23
CLPTM1-201ENST00000337392 F8W1H4 67 aa16.47■□□□□ 0.23
CLPTM1-201ENST00000337392 PAPPA-AS1Q5QFB9 102 aa16.47■□□□□ 0.23
CLPTM1-201ENST00000337392 HERV-K104P63124 156 aa16.46■□□□□ 0.23
CLPTM1-201ENST00000337392 PIK3CD-AS1Q5SR53 167 aa16.46■□□□□ 0.23
CLPTM1-201ENST00000337392 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.46■□□□□ 0.23
CLPTM1-201ENST00000337392 APOMO95445 188 aa16.46■□□□□ 0.22
CLPTM1-201ENST00000337392 SPINK8P0C7L1 97 aa16.46■□□□□ 0.22
CLPTM1-201ENST00000337392 LGALS3P17931 250 aaKnown RBP16.46■□□□□ 0.22
CLPTM1-201ENST00000337392 NDUFA11Q86Y39 141 aa16.46■□□□□ 0.22
CLPTM1-201ENST00000337392 LINC01549A6NIU2 74 aa16.45■□□□□ 0.22
CLPTM1-201ENST00000337392 K7EQD1 137 aa16.45■□□□□ 0.22
CLPTM1-201ENST00000337392 PTH2Q96A98 100 aa16.45■□□□□ 0.22
CLPTM1-201ENST00000337392 RRN3P1Q2M238 152 aa16.45■□□□□ 0.22
CLPTM1-201ENST00000337392 IGLL5B9A064 214 aa16.44■□□□□ 0.22
CLPTM1-201ENST00000337392 DEFB130BP0DP73 79 aa16.44■□□□□ 0.22
CLPTM1-201ENST00000337392 DEFB130AP0DP74 79 aa16.44■□□□□ 0.22
CLPTM1-201ENST00000337392 ERG28Q9UKR5 140 aa16.44■□□□□ 0.22
CLPTM1-201ENST00000337392 MAST4O15021 2626 aa16.44■□□□□ 0.22
CLPTM1-201ENST00000337392 DEFB4AO15263 64 aa16.44■□□□□ 0.22
CLPTM1-201ENST00000337392 CRLF1O75462 422 aa16.43■□□□□ 0.22
CLPTM1-201ENST00000337392 PYGO1Q9Y3Y4 419 aa16.43■□□□□ 0.22
CLPTM1-201ENST00000337392 H3BMG7 143 aa16.43■□□□□ 0.22
CLPTM1-201ENST00000337392 MT-ATP8P03928 68 aa16.43■□□□□ 0.22
CLPTM1-201ENST00000337392 C10orf126Q8N4M7 172 aa16.43■□□□□ 0.22
CLPTM1-201ENST00000337392 CDIP1Q9H305 208 aa16.43■□□□□ 0.22
CLPTM1-201ENST00000337392 IGHV3-30-3P0DP02 117 aa16.42■□□□□ 0.22
CLPTM1-201ENST00000337392 COX6A2Q02221 97 aa16.42■□□□□ 0.22
CLPTM1-201ENST00000337392 TRAV4A0A0B4J268 109 aa16.41■□□□□ 0.22
CLPTM1-201ENST00000337392 TAL2Q16559 108 aa16.41■□□□□ 0.22
CLPTM1-201ENST00000337392 MRPS36P82909 103 aaKnown RBP16.4■□□□□ 0.22
CLPTM1-201ENST00000337392 DGAT2L7PQ6IED9 249 aa16.4■□□□□ 0.22
CLPTM1-201ENST00000337392 RPL36AP83881 106 aaKnown RBP16.4■□□□□ 0.22
CLPTM1-201ENST00000337392 RPL36ALQ969Q0 106 aaKnown RBP16.4■□□□□ 0.22
CLPTM1-201ENST00000337392 C16orf74Q96GX8 76 aa16.4■□□□□ 0.22
CLPTM1-201ENST00000337392 NPC2P61916 151 aa16.39■□□□□ 0.21
CLPTM1-201ENST00000337392 DNAJC30Q96LL9 226 aa16.39■□□□□ 0.21
CLPTM1-201ENST00000337392 CDKN2A-AS1Q9UH64 79 aa16.39■□□□□ 0.21
CLPTM1-201ENST00000337392 TRAV13-1A0A0B4J241 112 aa16.39■□□□□ 0.21
CLPTM1-201ENST00000337392 LEPROTO15243 131 aa16.39■□□□□ 0.21
CLPTM1-201ENST00000337392 DAZ2Q13117 558 aaKnown RBP16.39■□□□□ 0.21
CLPTM1-201ENST00000337392 FAM110AQ9BQ89 295 aa16.38■□□□□ 0.21
CLPTM1-201ENST00000337392 TIMM21Q9BVV7 248 aa16.38■□□□□ 0.21
CLPTM1-201ENST00000337392 PRO0461Q9UI25 63 aa16.38■□□□□ 0.21
CLPTM1-201ENST00000337392 IGHV3-30P01768 117 aa16.37■□□□□ 0.21
CLPTM1-201ENST00000337392 IGHV3-30-5P0DP03 117 aa16.37■□□□□ 0.21
CLPTM1-201ENST00000337392 TRGV4A0A0C4DH28 118 aa16.37■□□□□ 0.21
CLPTM1-201ENST00000337392 B5MCH6 92 aa16.37■□□□□ 0.21
CLPTM1-201ENST00000337392 UBE2D3P61077 147 aa16.37■□□□□ 0.21
CLPTM1-201ENST00000337392 UBE2D2P62837 147 aa16.37■□□□□ 0.21
CLPTM1-201ENST00000337392 SPANXA1Q9NS26 97 aa16.36■□□□□ 0.21
CLPTM1-201ENST00000337392 IGKV3OR2-268A0A0C4DH90 116 aa16.36■□□□□ 0.21
CLPTM1-201ENST00000337392 XGP55808 180 aa16.36■□□□□ 0.21
CLPTM1-201ENST00000337392 GAGE6Q13070 117 aa16.35■□□□□ 0.21
CLPTM1-201ENST00000337392 UBE2D1P51668 147 aa16.35■□□□□ 0.21
CLPTM1-201ENST00000337392 NOTCH1P46531 2555 aa16.34■□□□□ 0.21
CLPTM1-201ENST00000337392 EIF4EBP3O60516 100 aaPredicted RBP16.34■□□□□ 0.21
CLPTM1-201ENST00000337392 C1QTNF4Q9BXJ3 329 aa16.34■□□□□ 0.21
CLPTM1-201ENST00000337392 A0A096LPF7 62 aa16.34■□□□□ 0.21
CLPTM1-201ENST00000337392 DAND5Q8N907 189 aa16.34■□□□□ 0.21
CLPTM1-201ENST00000337392 CMC4P56277 68 aaPredicted RBP16.33■□□□□ 0.2
CLPTM1-201ENST00000337392 DEFB135Q30KP9 77 aa16.33■□□□□ 0.2
CLPTM1-201ENST00000337392 ANAPC13Q9BS18 74 aa16.33■□□□□ 0.2
CLPTM1-201ENST00000337392 A0A0J9YXY3 114 aa16.32■□□□□ 0.2
CLPTM1-201ENST00000337392 ADAMTSL4-AS1Q5T5F5 129 aa16.32■□□□□ 0.2
CLPTM1-201ENST00000337392 ZNF625Q96I27 306 aaPredicted RBP16.32■□□□□ 0.2
CLPTM1-201ENST00000337392 CMYA5Q8N3K9 4069 aa16.32■□□□□ 0.2
CLPTM1-201ENST00000337392 CFC1BP0CG36 223 aa16.32■□□□□ 0.2
CLPTM1-201ENST00000337392 CFC1P0CG37 223 aa16.32■□□□□ 0.2
CLPTM1-201ENST00000337392 FHL2Q14192 279 aa16.32■□□□□ 0.2
CLPTM1-201ENST00000337392 A0A0U1RRA0 63 aa16.32■□□□□ 0.2
CLPTM1-201ENST00000337392 A0A1B0GWB2 263 aa16.32■□□□□ 0.2
CLPTM1-201ENST00000337392 H7C2G1 150 aa16.32■□□□□ 0.2
CLPTM1-201ENST00000337392 TINCRA0A1B0GVN0 87 aa16.31■□□□□ 0.2
CLPTM1-201ENST00000337392 FOXI1Q12951 378 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms