RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 C11orf72Q8NBR9 251 aa14.39□□□□□ -0.11
CDCA4-201ENST00000336219 ZNF625Q96I27 306 aaPredicted RBP14.39□□□□□ -0.11
CDCA4-201ENST00000336219 C4orf3Q8WVX3 66 aa14.38□□□□□ -0.11
CDCA4-201ENST00000336219 COX6CP09669 75 aa14.38□□□□□ -0.11
CDCA4-201ENST00000336219 IFITM1P13164 125 aa14.38□□□□□ -0.11
CDCA4-201ENST00000336219 SPANXA1Q9NS26 97 aa14.38□□□□□ -0.11
CDCA4-201ENST00000336219 LST1O00453 97 aa14.37□□□□□ -0.11
CDCA4-201ENST00000336219 COX6A2Q02221 97 aa14.37□□□□□ -0.11
CDCA4-201ENST00000336219 LINC01587Q99440 93 aa14.37□□□□□ -0.11
CDCA4-201ENST00000336219 DYNLRB2Q8TF09 96 aa14.36□□□□□ -0.11
CDCA4-201ENST00000336219 FAM208BQ5VWN6 2430 aa14.36□□□□□ -0.11
CDCA4-201ENST00000336219 IGHV3-53P01767 116 aa14.36□□□□□ -0.11
CDCA4-201ENST00000336219 TMEM101Q96IK0 257 aa14.36□□□□□ -0.11
CDCA4-201ENST00000336219 KHDC1LQ5JSQ8 128 aa14.35□□□□□ -0.11
CDCA4-201ENST00000336219 CITED2Q99967 270 aaPredicted RBP14.35□□□□□ -0.11
CDCA4-201ENST00000336219 H3BT86 120 aa14.35□□□□□ -0.11
CDCA4-201ENST00000336219 CENPEQ02224 2701 aa14.34□□□□□ -0.11
CDCA4-201ENST00000336219 NDUFA7O95182 113 aa14.34□□□□□ -0.11
CDCA4-201ENST00000336219 DEFB114Q30KQ6 69 aa14.34□□□□□ -0.11
CDCA4-201ENST00000336219 BEAN1Q3B7T3 259 aa14.34□□□□□ -0.11
CDCA4-201ENST00000336219 DNAJC30Q96LL9 226 aa14.34□□□□□ -0.11
CDCA4-201ENST00000336219 KRTAP10-9P60411 292 aa14.34□□□□□ -0.11
CDCA4-201ENST00000336219 INSP01308 110 aa14.33□□□□□ -0.12
CDCA4-201ENST00000336219 PRB1P04280 392 aa14.33□□□□□ -0.12
CDCA4-201ENST00000336219 TEX15Q9BXT5 2789 aa14.33□□□□□ -0.12
CDCA4-201ENST00000336219 SVIPQ8NHG7 77 aa14.33□□□□□ -0.12
CDCA4-201ENST00000336219 YAE1D1Q9NRH1 226 aa14.32□□□□□ -0.12
CDCA4-201ENST00000336219 RS1O15537 224 aa14.32□□□□□ -0.12
CDCA4-201ENST00000336219 Q9H8V8 135 aa14.32□□□□□ -0.12
CDCA4-201ENST00000336219 AKAP9Q99996 3911 aa14.31□□□□□ -0.12
CDCA4-201ENST00000336219 PTPN13Q12923 2485 aa14.31□□□□□ -0.12
CDCA4-201ENST00000336219 GAGE12JA6NER3 117 aa14.31□□□□□ -0.12
CDCA4-201ENST00000336219 GAGE7O76087 117 aa14.31□□□□□ -0.12
CDCA4-201ENST00000336219 GAGE12FP0CL80 117 aa14.31□□□□□ -0.12
CDCA4-201ENST00000336219 GAGE12GP0CL81 117 aa14.31□□□□□ -0.12
CDCA4-201ENST00000336219 GAGE12IP0CL82 117 aa14.31□□□□□ -0.12
CDCA4-201ENST00000336219 GAGE4Q13068 117 aa14.31□□□□□ -0.12
CDCA4-201ENST00000336219 Q6Q795 121 aa14.31□□□□□ -0.12
CDCA4-201ENST00000336219 IGHV3OR16-12A0A075B7B8 117 aa14.3□□□□□ -0.12
CDCA4-201ENST00000336219 NDUFA1O15239 70 aa14.3□□□□□ -0.12
CDCA4-201ENST00000336219 MYO9AB2RTY4 2548 aa14.3□□□□□ -0.12
CDCA4-201ENST00000336219 DEFB113Q30KQ7 82 aa14.3□□□□□ -0.12
CDCA4-201ENST00000336219 LINC00308Q8TCZ7 52 aa14.3□□□□□ -0.12
CDCA4-201ENST00000336219 LRRK2Q5S007 2527 aa14.29□□□□□ -0.12
CDCA4-201ENST00000336219 LINC00694P0DN24 101 aa14.29□□□□□ -0.12
CDCA4-201ENST00000336219 DGAT2L7PQ6IED9 249 aa14.29□□□□□ -0.12
CDCA4-201ENST00000336219 SOSTDC1Q6X4U4 206 aa14.29□□□□□ -0.12
CDCA4-201ENST00000336219 TIMM17BO60830 172 aa14.28□□□□□ -0.12
CDCA4-201ENST00000336219 XCL2Q9UBD3 114 aa14.28□□□□□ -0.12
CDCA4-201ENST00000336219 ZNF462Q96JM2 2506 aa14.27□□□□□ -0.12
CDCA4-201ENST00000336219 ODF3L2Q3SX64 289 aa14.27□□□□□ -0.13
CDCA4-201ENST00000336219 LINC00242Q5T6M2 205 aa14.26□□□□□ -0.13
CDCA4-201ENST00000336219 Q96MF0 132 aa14.26□□□□□ -0.13
CDCA4-201ENST00000336219 IGLV5-45A0A087WSX0 123 aa14.26□□□□□ -0.13
CDCA4-201ENST00000336219 CHCHD5Q9BSY4 110 aa14.26□□□□□ -0.13
CDCA4-201ENST00000336219 NAV2Q8IVL1 2488 aa14.26□□□□□ -0.13
CDCA4-201ENST00000336219 TRAV13-1A0A0B4J241 112 aa14.25□□□□□ -0.13
CDCA4-201ENST00000336219 TIRAPP58753 221 aa14.25□□□□□ -0.13
CDCA4-201ENST00000336219 DEFB121Q5J5C9 76 aa14.25□□□□□ -0.13
CDCA4-201ENST00000336219 LRRC75A-AS1Q8N1F1 130 aa14.25□□□□□ -0.13
CDCA4-201ENST00000336219 CIRBPQ14011 172 aaKnown RBP14.24□□□□□ -0.13
CDCA4-201ENST00000336219 ABCA12Q86UK0 2595 aa14.24□□□□□ -0.13
CDCA4-201ENST00000336219 ZFYVE26Q68DK2 2539 aa14.24□□□□□ -0.13
CDCA4-201ENST00000336219 C1orf158Q8N1D5 194 aa14.24□□□□□ -0.13
CDCA4-201ENST00000336219 IL17DQ8TAD2 202 aa14.23□□□□□ -0.13
CDCA4-201ENST00000336219 BBC3Q96PG8 261 aaPredicted RBP14.23□□□□□ -0.13
CDCA4-201ENST00000336219 UBR5O95071 2799 aaPredicted RBP14.23□□□□□ -0.13
CDCA4-201ENST00000336219 STHQ8IWL8 128 aa14.23□□□□□ -0.13
CDCA4-201ENST00000336219 C3orf56Q8N813 242 aa14.23□□□□□ -0.13
CDCA4-201ENST00000336219 IGLV5-39A0A0G2JS06 123 aa14.22□□□□□ -0.13
CDCA4-201ENST00000336219 SMIM1B2RUZ4 78 aa14.22□□□□□ -0.13
CDCA4-201ENST00000336219 TRAV25A0A0B4J276 109 aa14.21□□□□□ -0.13
CDCA4-201ENST00000336219 TRGV1A0A0A0MS02 117 aa14.21□□□□□ -0.13
CDCA4-201ENST00000336219 FAM240AA0A1B0GVK7 77 aa14.21□□□□□ -0.13
CDCA4-201ENST00000336219 MEIG1Q5JSS6 88 aa14.21□□□□□ -0.13
CDCA4-201ENST00000336219 COX7A2LO14548 114 aa14.2□□□□□ -0.14
CDCA4-201ENST00000336219 KRTAP1-3Q8IUG1 177 aa14.2□□□□□ -0.14
CDCA4-201ENST00000336219 TMEM86BQ8N661 226 aa14.2□□□□□ -0.14
CDCA4-201ENST00000336219 CHD6Q8TD26 2715 aa14.2□□□□□ -0.14
CDCA4-201ENST00000336219 USP24Q9UPU5 2620 aa14.2□□□□□ -0.14
CDCA4-201ENST00000336219 HERVK_113P63121 156 aa14.2□□□□□ -0.14
CDCA4-201ENST00000336219 PRIMA1Q86XR5 153 aa14.2□□□□□ -0.14
CDCA4-201ENST00000336219 SMCR5Q8TEV8 140 aa14.2□□□□□ -0.14
CDCA4-201ENST00000336219 NTM-AS1Q6ZSK4 140 aa14.19□□□□□ -0.14
CDCA4-201ENST00000336219 FAM218AQ96MZ4 157 aa14.19□□□□□ -0.14
CDCA4-201ENST00000336219 WNK1Q9H4A3 2382 aa14.19□□□□□ -0.14
CDCA4-201ENST00000336219 MRPL23Q16540 153 aaKnown RBP14.18□□□□□ -0.14
CDCA4-201ENST00000336219 C2CD3Q4AC94 2353 aa14.18□□□□□ -0.14
CDCA4-201ENST00000336219 TLN2Q9Y4G6 2542 aa14.17□□□□□ -0.14
CDCA4-201ENST00000336219 SHISA2Q6UWI4 295 aa14.17□□□□□ -0.14
CDCA4-201ENST00000336219 C11orf44Q8N8P7 122 aa14.17□□□□□ -0.14
CDCA4-201ENST00000336219 NBPF19A0A087WUL8 3843 aa14.17□□□□□ -0.14
CDCA4-201ENST00000336219 A0A1W2PRX2 142 aa14.17□□□□□ -0.14
CDCA4-201ENST00000336219 DAZ2Q13117 558 aaKnown RBP14.17□□□□□ -0.14
CDCA4-201ENST00000336219 DAZ4Q86SG3 579 aaKnown RBP14.17□□□□□ -0.14
CDCA4-201ENST00000336219 DAZ3Q9NR90 486 aaKnown RBP14.17□□□□□ -0.14
CDCA4-201ENST00000336219 K7EQD1 137 aa14.16□□□□□ -0.14
CDCA4-201ENST00000336219 RPL36AP83881 106 aaKnown RBP14.16□□□□□ -0.14
CDCA4-201ENST00000336219 RPL36ALQ969Q0 106 aaKnown RBP14.16□□□□□ -0.14
CDCA4-201ENST00000336219 ZNF469Q96JG9 3925 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms