RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 TTC32Q5I0X7 151 aa10.2□□□□□ -0.78
CMC1-201ENST00000334841 CLPSL2Q6UWE3 100 aa10.2□□□□□ -0.78
CMC1-201ENST00000334841 Q6ZR54 194 aa10.2□□□□□ -0.78
CMC1-201ENST00000334841 TMEM101Q96IK0 257 aa10.2□□□□□ -0.78
CMC1-201ENST00000334841 OPRPNQ99935 248 aaPredicted RBP10.2□□□□□ -0.78
CMC1-201ENST00000334841 PYGO1Q9Y3Y4 419 aa10.2□□□□□ -0.78
CMC1-201ENST00000334841 SACSQ9NZJ4 4579 aa10.19□□□□□ -0.78
CMC1-201ENST00000334841 DNAH6Q9C0G6 4158 aa10.19□□□□□ -0.78
CMC1-201ENST00000334841 IGLV4-3A0A075B6K6 122 aa10.19□□□□□ -0.78
CMC1-201ENST00000334841 TRAV9-2A0A087WT02 112 aa10.19□□□□□ -0.78
CMC1-201ENST00000334841 IBA57-AS1B1ANH7 110 aa10.19□□□□□ -0.78
CMC1-201ENST00000334841 K7EP13 123 aa10.19□□□□□ -0.78
CMC1-201ENST00000334841 M0R2N4 97 aa10.19□□□□□ -0.78
CMC1-201ENST00000334841 PDZD11Q5EBL8 140 aa10.19□□□□□ -0.78
CMC1-201ENST00000334841 RNASE13Q5GAN3 156 aaKnown RBP10.19□□□□□ -0.78
CMC1-201ENST00000334841 DGAT2L7PQ6IED9 249 aa10.19□□□□□ -0.78
CMC1-201ENST00000334841 LINC00269Q8N2A0 174 aa10.19□□□□□ -0.78
CMC1-201ENST00000334841 ZNF664Q8N3J9 261 aa10.19□□□□□ -0.78
CMC1-201ENST00000334841 C10orf126Q8N4M7 172 aa10.19□□□□□ -0.78
CMC1-201ENST00000334841 CDC42SE2Q9NRR3 84 aa10.19□□□□□ -0.78
CMC1-201ENST00000334841 MRPS36P82909 103 aaKnown RBP10.18□□□□□ -0.78
CMC1-201ENST00000334841 ERASQ7Z444 233 aa10.18□□□□□ -0.78
CMC1-201ENST00000334841 TIMM17AQ99595 171 aa10.18□□□□□ -0.78
CMC1-201ENST00000334841 PRR34Q9NV39 138 aa10.18□□□□□ -0.78
CMC1-201ENST00000334841 LINC01549A6NIU2 74 aa10.17□□□□□ -0.78
CMC1-201ENST00000334841 REG3AQ06141 175 aa10.17□□□□□ -0.78
CMC1-201ENST00000334841 ENHOQ6UWT2 76 aa10.17□□□□□ -0.78
CMC1-201ENST00000334841 UBE2WQ96B02 151 aa10.17□□□□□ -0.78
CMC1-201ENST00000334841 SCGB3A1Q96QR1 104 aa10.17□□□□□ -0.78
CMC1-201ENST00000334841 CRPP02741 224 aa10.16□□□□□ -0.78
CMC1-201ENST00000334841 KMT2CQ8NEZ4 4911 aaKnown RBP10.15□□□□□ -0.78
CMC1-201ENST00000334841 NPSP0C0P6 89 aa10.15□□□□□ -0.78
CMC1-201ENST00000334841 ZC2HC1BQ5TFG8 222 aa10.15□□□□□ -0.78
CMC1-201ENST00000334841 LINC00173Q6ZV60 143 aa10.15□□□□□ -0.78
CMC1-201ENST00000334841 TMEM141Q96I45 108 aa10.15□□□□□ -0.78
CMC1-201ENST00000334841 Q9HAA7 133 aa10.15□□□□□ -0.78
CMC1-201ENST00000334841 KMT2AQ03164 3969 aa10.15□□□□□ -0.78
CMC1-201ENST00000334841 IGKV3OR2-268A0A0C4DH90 116 aa10.14□□□□□ -0.79
CMC1-201ENST00000334841 HYDINQ4G0P3 5121 aa10.13□□□□□ -0.79
CMC1-201ENST00000334841 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.13□□□□□ -0.79
CMC1-201ENST00000334841 MIAQ16674 131 aa10.13□□□□□ -0.79
CMC1-201ENST00000334841 Q6ZN92 141 aa10.13□□□□□ -0.79
CMC1-201ENST00000334841 BAALCQ8WXS3 180 aa10.13□□□□□ -0.79
CMC1-201ENST00000334841 AMELXQ99217 191 aa10.13□□□□□ -0.79
CMC1-201ENST00000334841 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
CMC1-201ENST00000334841 KRTAP3-2Q9BYR7 98 aa10.13□□□□□ -0.79
CMC1-201ENST00000334841 TRAV8-3A0A0A6YYJ7 113 aa10.12□□□□□ -0.79
CMC1-201ENST00000334841 IFITM10A6NMD0 228 aa10.12□□□□□ -0.79
CMC1-201ENST00000334841 ATP5LO75964 103 aa10.12□□□□□ -0.79
CMC1-201ENST00000334841 LEPROTL1O95214 131 aa10.12□□□□□ -0.79
CMC1-201ENST00000334841 S100A6P06703 90 aa10.12□□□□□ -0.79
CMC1-201ENST00000334841 TEX43Q6ZNM6 134 aa10.12□□□□□ -0.79
CMC1-201ENST00000334841 RYR2Q92736 4967 aa10.11□□□□□ -0.79
CMC1-201ENST00000334841 IGLV10-54A0A075B6I4 117 aa10.11□□□□□ -0.79
CMC1-201ENST00000334841 LINC00959A0A1B0GUT2 108 aa10.11□□□□□ -0.79
CMC1-201ENST00000334841 FABP4P15090 132 aa10.11□□□□□ -0.79
CMC1-201ENST00000334841 HIST3H2BBQ8N257 126 aa10.11□□□□□ -0.79
CMC1-201ENST00000334841 C6orf223Q8N319 242 aa10.11□□□□□ -0.79
CMC1-201ENST00000334841 IFI27L1Q96BM0 104 aa10.11□□□□□ -0.79
CMC1-201ENST00000334841 VCX2Q9H322 139 aa10.11□□□□□ -0.79
CMC1-201ENST00000334841 TMA7Q9Y2S6 64 aaKnown RBP10.11□□□□□ -0.79
CMC1-201ENST00000334841 TRAV13-1A0A0B4J241 112 aa10.1□□□□□ -0.79
CMC1-201ENST00000334841 PAPPA-AS1Q5QFB9 102 aa10.1□□□□□ -0.79
CMC1-201ENST00000334841 Q6ZRN7 208 aaPredicted RBP10.1□□□□□ -0.79
CMC1-201ENST00000334841 IGKV2D-24A0A075B6R9 120 aa10.09□□□□□ -0.79
CMC1-201ENST00000334841 C5orf52A6NGY3 159 aa10.09□□□□□ -0.79
CMC1-201ENST00000334841 UBE2D1P51668 147 aa10.09□□□□□ -0.79
CMC1-201ENST00000334841 SNRPEP62304 92 aaKnown RBP10.09□□□□□ -0.79
CMC1-201ENST00000334841 KRTAP26-1Q6PEX3 210 aa10.09□□□□□ -0.79
CMC1-201ENST00000334841 C2orf88Q9BSF0 95 aa10.09□□□□□ -0.79
CMC1-201ENST00000334841 C1orf43Q9BWL3 253 aa10.09□□□□□ -0.79
CMC1-201ENST00000334841 CST9LQ9H4G1 147 aa10.09□□□□□ -0.79
CMC1-201ENST00000334841 HSPB8Q9UJY1 196 aa10.09□□□□□ -0.79
CMC1-201ENST00000334841 TRAV8-4A0A0B4J246 113 aa10.08□□□□□ -0.8
CMC1-201ENST00000334841 CCL25O15444 150 aa10.08□□□□□ -0.8
CMC1-201ENST00000334841 PMVKQ15126 192 aa10.08□□□□□ -0.8
CMC1-201ENST00000334841 C1orf134Q5TEV5 83 aa10.08□□□□□ -0.8
CMC1-201ENST00000334841 NFE4Q86UQ8 179 aa10.08□□□□□ -0.8
CMC1-201ENST00000334841 CHCHD10Q8WYQ3 142 aaPredicted RBP10.08□□□□□ -0.8
CMC1-201ENST00000334841 DNAH2Q9P225 4427 aa10.08□□□□□ -0.8
CMC1-201ENST00000334841 PRSS29PA6NIE9 313 aa10.07□□□□□ -0.8
CMC1-201ENST00000334841 XCL1P47992 114 aa10.07□□□□□ -0.8
CMC1-201ENST00000334841 SS18Q15532 418 aa10.07□□□□□ -0.8
CMC1-201ENST00000334841 RMI2Q96E14 147 aa10.07□□□□□ -0.8
CMC1-201ENST00000334841 PACRGQ96M98 296 aaPredicted RBP10.07□□□□□ -0.8
CMC1-201ENST00000334841 PRSS1P07477 247 aa10.06□□□□□ -0.8
CMC1-201ENST00000334841 HIST1H2BLQ99880 126 aa10.06□□□□□ -0.8
CMC1-201ENST00000334841 TRAV12-1A0A0B4J245 112 aa10.05□□□□□ -0.8
CMC1-201ENST00000334841 GAGE12HA6NDE8 117 aa10.05□□□□□ -0.8
CMC1-201ENST00000334841 H0Y8G0 127 aa10.05□□□□□ -0.8
CMC1-201ENST00000334841 RTL8CO15255 209 aa10.05□□□□□ -0.8
CMC1-201ENST00000334841 S100A2P29034 98 aa10.05□□□□□ -0.8
CMC1-201ENST00000334841 FOXI1Q12951 378 aa10.05□□□□□ -0.8
CMC1-201ENST00000334841 LINC00242Q5T6M2 205 aa10.05□□□□□ -0.8
CMC1-201ENST00000334841 FAM19A3Q7Z5A8 133 aa10.05□□□□□ -0.8
CMC1-201ENST00000334841 MAPKAPK5-AS1Q8N8E1 139 aa10.05□□□□□ -0.8
CMC1-201ENST00000334841 TM2D2Q9BX73 214 aa10.05□□□□□ -0.8
CMC1-201ENST00000334841 IGLV4-69A0A075B6H9 119 aa10.04□□□□□ -0.8
CMC1-201ENST00000334841 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
CMC1-201ENST00000334841 COX6A2Q02221 97 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms