RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 MIAQ16674 131 aa8.47□□□□□ -1.05
CSPG4P4Y-201ENST00000333235 TRGV2A0A075B6R0 118 aa8.46□□□□□ -1.05
CSPG4P4Y-201ENST00000333235 DNAJC9-AS1A6NH13 148 aa8.46□□□□□ -1.05
CSPG4P4Y-201ENST00000333235 A0A0U1RRA0 63 aa8.46□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 ZFAND6Q6FIF0 208 aa8.46□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 SPANXDQ9BXN6 97 aa8.46□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 SPANXCQ9NY87 97 aa8.46□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 GAGE12JA6NER3 117 aa8.45□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 GAGE4Q13068 117 aa8.45□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 GAGE5Q13069 117 aa8.45□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 LINC01620Q4KN68 170 aa8.45□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 MEIG1Q5JSS6 88 aa8.45□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 K7EQD1 137 aa8.45□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 COPS9Q8WXC6 57 aa8.45□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 ZNF625Q96I27 306 aaPredicted RBP8.45□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 TMEM101Q96IK0 257 aa8.45□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 USP24Q9UPU5 2620 aa8.45□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 IFITM1P13164 125 aa8.45□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 ADAMTSL4-AS1Q5T5F5 129 aa8.45□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 ICOSQ9Y6W8 199 aa8.45□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 TRBV10-1A0A0K0K1A3 114 aa8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 CMC4P56277 68 aaPredicted RBP8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 TIRAPP58753 221 aa8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 DAZ2Q13117 558 aaKnown RBP8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 Q6ZTI0 123 aa8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 DAZ4Q86SG3 579 aaKnown RBP8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 DAND5Q8N907 189 aa8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 Q9H8V8 135 aa8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 NOP10Q9NPE3 64 aaKnown RBP8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 DAZ3Q9NR90 486 aaKnown RBP8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 FBN2P35556 2912 aa8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 TRBV30A0A0K0K1B3 111 aa8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 TRIAP1O43715 76 aa8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 C1orf158Q8N1D5 194 aa8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 CHD6Q8TD26 2715 aa8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 NTN5Q8WTR8 489 aaPredicted RBP8.44□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 PRIMA1Q86XR5 153 aa8.43□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 WFDC11Q8NEX6 87 aa8.43□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 FAM104AQ969W3 186 aa8.43□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 CLUHP3Q96NS8 147 aa8.43□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 CITED2Q99967 270 aaPredicted RBP8.43□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 RPL35AP18077 110 aaKnown RBP8.43□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 RPL13AP40429 203 aaKnown RBP8.43□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 C2orf82Q6UX34 121 aa8.43□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 CARD19Q96LW7 228 aa8.43□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 SBSPONQ8IVN8 264 aa8.42□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 LITAFQ99732 161 aa8.42□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 NDUFA1O15239 70 aa8.42□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 TRAV4A0A0B4J268 109 aa8.42□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 TIMM17BO60830 172 aa8.42□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 GAGE7O76087 117 aa8.42□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 GAGE12FP0CL80 117 aa8.42□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 GAGE12GP0CL81 117 aa8.42□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 GAGE12IP0CL82 117 aa8.42□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 CKS1BP61024 79 aa8.42□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 JMJD1CQ15652 2540 aa8.41□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 CR1P17927 2039 aa8.41□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 TRGV4A0A0C4DH28 118 aa8.41□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 TRBV10-2A0A0K0K1G8 114 aa8.41□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 EIF4EBP3O60516 100 aaPredicted RBP8.41□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 TMEM243Q9BU79 118 aa8.41□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 CDIP1Q9H305 208 aa8.41□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 IGKV3OR2-268A0A0C4DH90 116 aa8.41□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 MT-ATP8P03928 68 aa8.4□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 LINC00242Q5T6M2 205 aa8.4□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 MTORP42345 2549 aa8.4□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 LINC00694P0DN24 101 aa8.4□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 COX6A2Q02221 97 aa8.4□□□□□ -1.06
CSPG4P4Y-201ENST00000333235 UBE2WQ96B02 151 aa8.4□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 C16orf74Q96GX8 76 aa8.4□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 SNCGO76070 127 aa8.39□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 NDUFA7O95182 113 aa8.39□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 XGP55808 180 aa8.39□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 FHL3Q13643 280 aa8.39□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 M0QXV9 152 aa8.39□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 CLEC2BQ92478 149 aa8.39□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 IGLV5-45A0A087WSX0 123 aa8.38□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 TRAV8-4A0A0B4J246 113 aa8.38□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 TOMM7Q9P0U1 55 aa8.38□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 FLNAP21333 2647 aaKnown RBP8.38□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 ITPR3Q14573 2671 aa8.38□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 RNF183Q96D59 192 aa8.38□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 CSDC2Q9Y534 153 aaKnown RBP8.38□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 LINC00308Q8TCZ7 52 aa8.38□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 ESM1Q9NQ30 184 aa8.38□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 TEX49A0A1B0GTD5 131 aa8.37□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.37□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 ACANP16112 2415 aa8.37□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 LINC01006Q8NI28 216 aa8.37□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 CHCHD5Q9BSY4 110 aa8.37□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 CDC42SE2Q9NRR3 84 aa8.37□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 H3BT86 120 aa8.37□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 WFDC10AQ9H1F0 79 aa8.37□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 UBR5O95071 2799 aaPredicted RBP8.36□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 SMIM1B2RUZ4 78 aa8.36□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 HERV-K104P63124 156 aa8.36□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 NTM-AS1Q6ZSK4 140 aa8.36□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 GAGE6Q13070 117 aa8.36□□□□□ -1.07
CSPG4P4Y-201ENST00000333235 KRTAP1-3Q8IUG1 177 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms