RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 ZNF106Q9H2Y7 1883 aaKnown RBP12.35□□□□□ -0.43
NSMCE3-201ENST00000332303 ARHGAP32A7KAX9 2087 aa12.35□□□□□ -0.43
NSMCE3-201ENST00000332303 C5orf47Q569G3 176 aa12.35□□□□□ -0.43
NSMCE3-201ENST00000332303 HCFC1P51610 2035 aa12.35□□□□□ -0.43
NSMCE3-201ENST00000332303 SS18L2Q9UHA2 77 aa12.35□□□□□ -0.43
NSMCE3-201ENST00000332303 TRBV6-5A0A0K0K1A5 114 aa12.35□□□□□ -0.43
NSMCE3-201ENST00000332303 G3V4G9 280 aa12.34□□□□□ -0.43
NSMCE3-201ENST00000332303 TMEM223A0PJW6 202 aa12.34□□□□□ -0.43
NSMCE3-201ENST00000332303 HILS1P60008 231 aa12.34□□□□□ -0.43
NSMCE3-201ENST00000332303 SHISA2Q6UWI4 295 aa12.34□□□□□ -0.43
NSMCE3-201ENST00000332303 RNF185Q96GF1 192 aa12.33□□□□□ -0.44
NSMCE3-201ENST00000332303 CRYGDP07320 174 aa12.33□□□□□ -0.44
NSMCE3-201ENST00000332303 SPANXB1Q9NS25 103 aaPredicted RBP12.33□□□□□ -0.44
NSMCE3-201ENST00000332303 TNRC6BQ9UPQ9 1833 aaKnown RBP12.32□□□□□ -0.44
NSMCE3-201ENST00000332303 IGLV2-11P01706 119 aa12.32□□□□□ -0.44
NSMCE3-201ENST00000332303 LINC00308Q8TCZ7 52 aa12.32□□□□□ -0.44
NSMCE3-201ENST00000332303 SPATA25Q9BR10 227 aa12.32□□□□□ -0.44
NSMCE3-201ENST00000332303 PYGO1Q9Y3Y4 419 aa12.32□□□□□ -0.44
NSMCE3-201ENST00000332303 U3KQK5 164 aa12.32□□□□□ -0.44
NSMCE3-201ENST00000332303 BPY2O14599 106 aa12.32□□□□□ -0.44
NSMCE3-201ENST00000332303 LINC00482Q8N8I6 264 aa12.32□□□□□ -0.44
NSMCE3-201ENST00000332303 Q8N976 141 aa12.32□□□□□ -0.44
NSMCE3-201ENST00000332303 H0Y9J4 135 aa12.31□□□□□ -0.44
NSMCE3-201ENST00000332303 ZNF843Q8N446 348 aa12.31□□□□□ -0.44
NSMCE3-201ENST00000332303 GOLGB1Q14789 3259 aaKnown RBP12.31□□□□□ -0.44
NSMCE3-201ENST00000332303 EP400Q96L91 3159 aa12.3□□□□□ -0.44
NSMCE3-201ENST00000332303 ZNF702PQ9H963 129 aa12.3□□□□□ -0.44
NSMCE3-201ENST00000332303 LINC01006Q8NI28 216 aa12.3□□□□□ -0.44
NSMCE3-201ENST00000332303 RNASE3P12724 160 aaKnown RBP12.29□□□□□ -0.44
NSMCE3-201ENST00000332303 RBX1P62877 108 aa12.28□□□□□ -0.44
NSMCE3-201ENST00000332303 KLLNB2CW77 178 aa12.28□□□□□ -0.44
NSMCE3-201ENST00000332303 PRB2P02812 416 aaPredicted RBP12.28□□□□□ -0.44
NSMCE3-201ENST00000332303 C10orf142B7Z368 130 aa12.28□□□□□ -0.44
NSMCE3-201ENST00000332303 RNF183Q96D59 192 aa12.28□□□□□ -0.44
NSMCE3-201ENST00000332303 PROK1P58294 105 aa12.28□□□□□ -0.44
NSMCE3-201ENST00000332303 MAPKAPK5-AS1Q8N8E1 139 aa12.28□□□□□ -0.44
NSMCE3-201ENST00000332303 YPEL4Q96NS1 127 aa12.28□□□□□ -0.44
NSMCE3-201ENST00000332303 XAGE1AQ9HD64 81 aa12.28□□□□□ -0.44
NSMCE3-201ENST00000332303 KIAA1549LQ6ZVL6 1849 aa12.28□□□□□ -0.44
NSMCE3-201ENST00000332303 PIK3CD-AS1Q5SR53 167 aa12.27□□□□□ -0.44
NSMCE3-201ENST00000332303 FAM110AQ9BQ89 295 aa12.27□□□□□ -0.44
NSMCE3-201ENST00000332303 SYCNQ0VAF6 134 aa12.27□□□□□ -0.45
NSMCE3-201ENST00000332303 J3KT08 172 aa12.26□□□□□ -0.45
NSMCE3-201ENST00000332303 IGLV1-40P01703 118 aa12.26□□□□□ -0.45
NSMCE3-201ENST00000332303 BBC3Q96PG8 261 aaPredicted RBP12.26□□□□□ -0.45
NSMCE3-201ENST00000332303 FASNP49327 2511 aaKnown RBP12.26□□□□□ -0.45
NSMCE3-201ENST00000332303 MTORP42345 2549 aa12.25□□□□□ -0.45
NSMCE3-201ENST00000332303 NRACQ8N912 160 aa12.25□□□□□ -0.45
NSMCE3-201ENST00000332303 C11orf21Q9P2W6 132 aa12.25□□□□□ -0.45
NSMCE3-201ENST00000332303 TEX49A0A1B0GTD5 131 aa12.25□□□□□ -0.45
NSMCE3-201ENST00000332303 SPTBN4Q9H254 2564 aa12.25□□□□□ -0.45
NSMCE3-201ENST00000332303 TRBV30A0A0K0K1B3 111 aa12.25□□□□□ -0.45
NSMCE3-201ENST00000332303 POLR2KP53803 58 aaKnown RBP12.25□□□□□ -0.45
NSMCE3-201ENST00000332303 FAM19A1Q7Z5A9 133 aa12.24□□□□□ -0.45
NSMCE3-201ENST00000332303 A0A087WZ39 114 aa12.24□□□□□ -0.45
NSMCE3-201ENST00000332303 UPK3BQ9BT76 320 aa12.24□□□□□ -0.45
NSMCE3-201ENST00000332303 TP73-AS1Q9UF72 201 aa12.24□□□□□ -0.45
NSMCE3-201ENST00000332303 TRAV23DV6A0A075B6W5 121 aa12.23□□□□□ -0.45
NSMCE3-201ENST00000332303 TRIAP1O43715 76 aa12.23□□□□□ -0.45
NSMCE3-201ENST00000332303 C6orf99Q4VX62 202 aa12.23□□□□□ -0.45
NSMCE3-201ENST00000332303 KIR2DL5BQ8NHK3 375 aa12.23□□□□□ -0.45
NSMCE3-201ENST00000332303 TSHBP01222 138 aa12.23□□□□□ -0.45
NSMCE3-201ENST00000332303 PRR9Q5T870 116 aa12.23□□□□□ -0.45
NSMCE3-201ENST00000332303 TIMM17BO60830 172 aa12.23□□□□□ -0.45
NSMCE3-201ENST00000332303 CD164L2Q6UWJ8 174 aa12.23□□□□□ -0.45
NSMCE3-201ENST00000332303 CENPFP49454 3210 aa12.23□□□□□ -0.45
NSMCE3-201ENST00000332303 A0A096LNI7 61 aa12.23□□□□□ -0.45
NSMCE3-201ENST00000332303 LY6G6DO95868 133 aa12.23□□□□□ -0.45
NSMCE3-201ENST00000332303 TRAV10A0A0B4J240 114 aa12.22□□□□□ -0.45
NSMCE3-201ENST00000332303 DCANP1Q8TF63 244 aa12.22□□□□□ -0.45
NSMCE3-201ENST00000332303 C9orf85Q96MD7 179 aa12.22□□□□□ -0.45
NSMCE3-201ENST00000332303 ATP5EP2Q5VTU8 51 aa12.21□□□□□ -0.45
NSMCE3-201ENST00000332303 Q6ZS46 218 aa12.21□□□□□ -0.45
NSMCE3-201ENST00000332303 SLPIP03973 132 aa12.2□□□□□ -0.46
NSMCE3-201ENST00000332303 CNFNQ9BYD5 112 aa12.2□□□□□ -0.46
NSMCE3-201ENST00000332303 MRPS36P82909 103 aaKnown RBP12.19□□□□□ -0.46
NSMCE3-201ENST00000332303 MRGPRG-AS1Q2M3A8 158 aa12.19□□□□□ -0.46
NSMCE3-201ENST00000332303 KPRPQ5T749 579 aaPredicted RBP12.18□□□□□ -0.46
NSMCE3-201ENST00000332303 LELP1Q5T871 98 aa12.18□□□□□ -0.46
NSMCE3-201ENST00000332303 IGKV4-1P06312 121 aa12.18□□□□□ -0.46
NSMCE3-201ENST00000332303 WFDC10AQ9H1F0 79 aa12.18□□□□□ -0.46
NSMCE3-201ENST00000332303 NDUFC2O95298 119 aa12.18□□□□□ -0.46
NSMCE3-201ENST00000332303 C20orf197Q8N268 126 aa12.18□□□□□ -0.46
NSMCE3-201ENST00000332303 A8MZ25 164 aa12.17□□□□□ -0.46
NSMCE3-201ENST00000332303 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.17□□□□□ -0.46
NSMCE3-201ENST00000332303 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.17□□□□□ -0.46
NSMCE3-201ENST00000332303 FAM19A5Q7Z5A7 132 aaPredicted RBP12.17□□□□□ -0.46
NSMCE3-201ENST00000332303 SDIM1Q6ZPB5 146 aa12.17□□□□□ -0.46
NSMCE3-201ENST00000332303 C18orf65Q6ZTR6 163 aa12.17□□□□□ -0.46
NSMCE3-201ENST00000332303 UBE2D4Q9Y2X8 147 aa12.17□□□□□ -0.46
NSMCE3-201ENST00000332303 CDSNQ15517 529 aa12.16□□□□□ -0.46
NSMCE3-201ENST00000332303 MT-ATP8P03928 68 aa12.16□□□□□ -0.46
NSMCE3-201ENST00000332303 LINC00959A0A1B0GUT2 108 aa12.16□□□□□ -0.46
NSMCE3-201ENST00000332303 NDUFV3P56181 108 aaKnown RBP12.16□□□□□ -0.46
NSMCE3-201ENST00000332303 CCKP06307 115 aa12.15□□□□□ -0.46
NSMCE3-201ENST00000332303 AVPP01185 164 aa12.15□□□□□ -0.46
NSMCE3-201ENST00000332303 UQCRQO14949 82 aa12.14□□□□□ -0.47
NSMCE3-201ENST00000332303 CEP192Q8TEP8 1941 aa12.14□□□□□ -0.47
NSMCE3-201ENST00000332303 LOC100131303A0A0U1RQF7 123 aa12.14□□□□□ -0.47
NSMCE3-201ENST00000332303 Q6ZQY7 126 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms