RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 TMEM223A0PJW6 202 aa12.58□□□□□ -0.4
ACTB-201ENST00000331789 MRPS36P82909 103 aaKnown RBP12.58□□□□□ -0.4
ACTB-201ENST00000331789 EGFEM1PQ0D2K5 195 aa12.58□□□□□ -0.4
ACTB-201ENST00000331789 MIFP14174 115 aa12.57□□□□□ -0.4
ACTB-201ENST00000331789 TSPEAR-AS2P59090 65 aa12.57□□□□□ -0.4
ACTB-201ENST00000331789 ORAOV1Q8WV07 137 aa12.57□□□□□ -0.4
ACTB-201ENST00000331789 ZNF815PA8K554 130 aa12.56□□□□□ -0.4
ACTB-201ENST00000331789 LURAP1LQ8IV03 231 aa12.56□□□□□ -0.4
ACTB-201ENST00000331789 TMEM243Q9BU79 118 aa12.56□□□□□ -0.4
ACTB-201ENST00000331789 CELA1Q9UNI1 258 aa12.56□□□□□ -0.4
ACTB-201ENST00000331789 IGHV3-64A0A075B6Q5 118 aa12.55□□□□□ -0.4
ACTB-201ENST00000331789 GYPEP15421 78 aa12.55□□□□□ -0.4
ACTB-201ENST00000331789 PLEKHB2Q96CS7 222 aa12.55□□□□□ -0.4
ACTB-201ENST00000331789 TINCRA0A1B0GVN0 87 aa12.54□□□□□ -0.4
ACTB-201ENST00000331789 TAX1BP3O14907 124 aa12.54□□□□□ -0.4
ACTB-201ENST00000331789 UBE2D1P51668 147 aa12.54□□□□□ -0.4
ACTB-201ENST00000331789 DAD1P61803 113 aa12.54□□□□□ -0.4
ACTB-201ENST00000331789 SEC11AP67812 179 aa12.54□□□□□ -0.4
ACTB-201ENST00000331789 G3V4G9 280 aa12.53□□□□□ -0.4
ACTB-201ENST00000331789 UBE2L6O14933 153 aa12.53□□□□□ -0.4
ACTB-201ENST00000331789 LEPROTO15243 131 aa12.53□□□□□ -0.4
ACTB-201ENST00000331789 GCSHP23434 173 aa12.53□□□□□ -0.4
ACTB-201ENST00000331789 PRO0255Q9UI72 69 aa12.53□□□□□ -0.4
ACTB-201ENST00000331789 CSDC2Q9Y534 153 aaKnown RBP12.53□□□□□ -0.4
ACTB-201ENST00000331789 CMYA5Q8N3K9 4069 aa12.53□□□□□ -0.4
ACTB-201ENST00000331789 MAST4O15021 2626 aa12.53□□□□□ -0.4
ACTB-201ENST00000331789 J3QQQ9 107 aa12.52□□□□□ -0.4
ACTB-201ENST00000331789 AMMECR1LQ6DCA0 310 aa12.52□□□□□ -0.4
ACTB-201ENST00000331789 TRBV6-8A0A0A6YYG3 113 aa12.52□□□□□ -0.41
ACTB-201ENST00000331789 K7EP13 123 aa12.52□□□□□ -0.41
ACTB-201ENST00000331789 RETNQ9HD89 108 aa12.52□□□□□ -0.41
ACTB-201ENST00000331789 CDC42SE2Q9NRR3 84 aa12.52□□□□□ -0.41
ACTB-201ENST00000331789 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
ACTB-201ENST00000331789 PAX4O43316 350 aa12.51□□□□□ -0.41
ACTB-201ENST00000331789 FXYD2P54710 66 aa12.51□□□□□ -0.41
ACTB-201ENST00000331789 GAGE6Q13070 117 aa12.51□□□□□ -0.41
ACTB-201ENST00000331789 OR5A1Q8NGJ0 315 aa12.51□□□□□ -0.41
ACTB-201ENST00000331789 ATP6V0E2Q8NHE4 81 aa12.51□□□□□ -0.41
ACTB-201ENST00000331789 A0A0J9YY99 117 aa12.5□□□□□ -0.41
ACTB-201ENST00000331789 A8MZ25 164 aa12.5□□□□□ -0.41
ACTB-201ENST00000331789 SPART-AS1P0CW21 52 aa12.5□□□□□ -0.41
ACTB-201ENST00000331789 LGALS3P17931 250 aaKnown RBP12.5□□□□□ -0.41
ACTB-201ENST00000331789 CEND1Q8N111 149 aa12.5□□□□□ -0.41
ACTB-201ENST00000331789 TRAV8-3A0A0A6YYJ7 113 aa12.5□□□□□ -0.41
ACTB-201ENST00000331789 COX6A2Q02221 97 aa12.5□□□□□ -0.41
ACTB-201ENST00000331789 SCGB1D4Q6XE38 83 aa12.5□□□□□ -0.41
ACTB-201ENST00000331789 TMEM101Q96IK0 257 aa12.5□□□□□ -0.41
ACTB-201ENST00000331789 HIST1H4GQ99525 98 aa12.5□□□□□ -0.41
ACTB-201ENST00000331789 GEMIN7Q9H840 131 aaKnown RBP12.5□□□□□ -0.41
ACTB-201ENST00000331789 PKD1L1Q8TDX9 2849 aa12.5□□□□□ -0.41
ACTB-201ENST00000331789 A0A096LPF7 62 aa12.49□□□□□ -0.41
ACTB-201ENST00000331789 A6NDN8 102 aa12.49□□□□□ -0.41
ACTB-201ENST00000331789 H7C423 109 aa12.49□□□□□ -0.41
ACTB-201ENST00000331789 SMAGPQ0VAQ4 97 aa12.49□□□□□ -0.41
ACTB-201ENST00000331789 TAL2Q16559 108 aa12.49□□□□□ -0.41
ACTB-201ENST00000331789 LINC00469Q8N7U9 141 aa12.49□□□□□ -0.41
ACTB-201ENST00000331789 VSIG2Q96IQ7 327 aa12.49□□□□□ -0.41
ACTB-201ENST00000331789 TIRAPP58753 221 aa12.49□□□□□ -0.41
ACTB-201ENST00000331789 CHCHD5Q9BSY4 110 aa12.49□□□□□ -0.41
ACTB-201ENST00000331789 TM2D2Q9BX73 214 aa12.49□□□□□ -0.41
ACTB-201ENST00000331789 TRAV13-1A0A0B4J241 112 aa12.48□□□□□ -0.41
ACTB-201ENST00000331789 SPINK8P0C7L1 97 aa12.48□□□□□ -0.41
ACTB-201ENST00000331789 IGHV3-30-3P0DP02 117 aa12.48□□□□□ -0.41
ACTB-201ENST00000331789 LINC00242Q5T6M2 205 aa12.48□□□□□ -0.41
ACTB-201ENST00000331789 CDKN2A-AS1Q9UH64 79 aa12.48□□□□□ -0.41
ACTB-201ENST00000331789 COL6A5A8TX70 2615 aa12.48□□□□□ -0.41
ACTB-201ENST00000331789 ATP5G1P05496 136 aa12.47□□□□□ -0.41
ACTB-201ENST00000331789 PTTG1IPP53801 180 aa12.47□□□□□ -0.41
ACTB-201ENST00000331789 IGHV1-58A0A0C4DH39 117 aa12.46□□□□□ -0.42
ACTB-201ENST00000331789 F5H768 121 aa12.46□□□□□ -0.42
ACTB-201ENST00000331789 HTN3P15516 51 aa12.46□□□□□ -0.42
ACTB-201ENST00000331789 IGLV4-60A0A075B6I1 120 aa12.45□□□□□ -0.42
ACTB-201ENST00000331789 IGLV5-45A0A087WSX0 123 aa12.45□□□□□ -0.42
ACTB-201ENST00000331789 FAM19A3Q7Z5A8 133 aa12.45□□□□□ -0.42
ACTB-201ENST00000331789 TRAV26-1A0A087WT03 109 aa12.45□□□□□ -0.42
ACTB-201ENST00000331789 H3BRM9 83 aa12.45□□□□□ -0.42
ACTB-201ENST00000331789 SAMD5Q5TGI4 173 aa12.45□□□□□ -0.42
ACTB-201ENST00000331789 RAB37Q96AX2 223 aa12.45□□□□□ -0.42
ACTB-201ENST00000331789 HERVK_113P63121 156 aa12.43□□□□□ -0.42
ACTB-201ENST00000331789 K7ERJ3 54 aa12.43□□□□□ -0.42
ACTB-201ENST00000331789 SMIM13P0DJ93 91 aa12.43□□□□□ -0.42
ACTB-201ENST00000331789 SRSF9Q13242 221 aaKnown RBP eCLIP12.43□□□□□ -0.42
ACTB-201ENST00000331789 NHP2Q9NX24 153 aaKnown RBP12.43□□□□□ -0.42
ACTB-201ENST00000331789 C12orf74Q32Q52 190 aa12.42□□□□□ -0.42
ACTB-201ENST00000331789 IGKV3OR2-268A0A0C4DH90 116 aa12.41□□□□□ -0.42
ACTB-201ENST00000331789 PRB2P02812 416 aaPredicted RBP12.41□□□□□ -0.42
ACTB-201ENST00000331789 C10orf126Q8N4M7 172 aa12.41□□□□□ -0.42
ACTB-201ENST00000331789 NAA38Q9BRA0 125 aaKnown RBP12.41□□□□□ -0.42
ACTB-201ENST00000331789 C9orf118A6NHY6 69 aa12.4□□□□□ -0.42
ACTB-201ENST00000331789 TMEM262E9PQX1 116 aa12.4□□□□□ -0.42
ACTB-201ENST00000331789 VAMP3Q15836 100 aa12.39□□□□□ -0.43
ACTB-201ENST00000331789 SPANXB1Q9NS25 103 aaPredicted RBP12.39□□□□□ -0.43
ACTB-201ENST00000331789 A0A0J9YXY3 114 aa12.39□□□□□ -0.43
ACTB-201ENST00000331789 DNAH3Q8TD57 4116 aa12.39□□□□□ -0.43
ACTB-201ENST00000331789 NDUFA12Q9UI09 145 aa12.39□□□□□ -0.43
ACTB-201ENST00000331789 TEX48A0A1B0GUV7 120 aa12.38□□□□□ -0.43
ACTB-201ENST00000331789 H3BUT2 72 aa12.37□□□□□ -0.43
ACTB-201ENST00000331789 RBX1P62877 108 aa12.37□□□□□ -0.43
ACTB-201ENST00000331789 IGLV5-39A0A0G2JS06 123 aa12.37□□□□□ -0.43
ACTB-201ENST00000331789 SMIM1B2RUZ4 78 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms