RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 TRBV12-3P01733 135 aa13.38□□□□□ -0.27
PKP3-201ENST00000331563 TMEM61Q8N0U2 210 aa13.38□□□□□ -0.27
PKP3-201ENST00000331563 DSCR8Q96T75 97 aa13.37□□□□□ -0.27
PKP3-201ENST00000331563 SOCS3O14543 225 aa13.37□□□□□ -0.27
PKP3-201ENST00000331563 FAM19A4Q96LR4 140 aa13.37□□□□□ -0.27
PKP3-201ENST00000331563 IGHV4-38-2P0DP08 117 aa13.36□□□□□ -0.27
PKP3-201ENST00000331563 SDIM1Q6ZPB5 146 aa13.36□□□□□ -0.27
PKP3-201ENST00000331563 IGKV3-20P01619 116 aa13.36□□□□□ -0.27
PKP3-201ENST00000331563 PIMREGQ9BSJ6 248 aa13.36□□□□□ -0.27
PKP3-201ENST00000331563 HIST1H4AP62805 103 aaKnown RBP13.35□□□□□ -0.27
PKP3-201ENST00000331563 C10orf105Q8TEF2 133 aa13.35□□□□□ -0.27
PKP3-201ENST00000331563 IGHV1-58A0A0C4DH39 117 aa13.35□□□□□ -0.27
PKP3-201ENST00000331563 DCANP1Q8TF63 244 aa13.35□□□□□ -0.27
PKP3-201ENST00000331563 IGHV3-11P01762 117 aa13.35□□□□□ -0.27
PKP3-201ENST00000331563 APRG1Q8IVJ8 170 aa13.34□□□□□ -0.27
PKP3-201ENST00000331563 LY6EQ16553 131 aa13.34□□□□□ -0.27
PKP3-201ENST00000331563 ITPR2Q14571 2701 aa13.33□□□□□ -0.28
PKP3-201ENST00000331563 MYO9AB2RTY4 2548 aa13.33□□□□□ -0.28
PKP3-201ENST00000331563 TRAV12-2A0A075B6T6 113 aa13.32□□□□□ -0.28
PKP3-201ENST00000331563 KRTAP10-9P60411 292 aa13.32□□□□□ -0.28
PKP3-201ENST00000331563 NF1P21359 2839 aa13.32□□□□□ -0.28
PKP3-201ENST00000331563 A0A0U1RRA0 63 aa13.32□□□□□ -0.28
PKP3-201ENST00000331563 KLLNB2CW77 178 aa13.32□□□□□ -0.28
PKP3-201ENST00000331563 AVPP01185 164 aa13.32□□□□□ -0.28
PKP3-201ENST00000331563 RHPN1-AS1Q9BWJ2 59 aa13.32□□□□□ -0.28
PKP3-201ENST00000331563 PEMTQ9UBM1 199 aa13.31□□□□□ -0.28
PKP3-201ENST00000331563 NDUFA4O00483 81 aa13.31□□□□□ -0.28
PKP3-201ENST00000331563 VSIG2Q96IQ7 327 aa13.31□□□□□ -0.28
PKP3-201ENST00000331563 MRPS36P82909 103 aaKnown RBP13.31□□□□□ -0.28
PKP3-201ENST00000331563 SETD2Q9BYW2 2564 aaPredicted RBP13.3□□□□□ -0.28
PKP3-201ENST00000331563 IGHV3-73A0A0B4J1V6 119 aa13.3□□□□□ -0.28
PKP3-201ENST00000331563 FAM223BA6NKX1 122 aa13.3□□□□□ -0.28
PKP3-201ENST00000331563 DAZ2Q13117 558 aaKnown RBP13.3□□□□□ -0.28
PKP3-201ENST00000331563 KLK9Q2XQG4 91 aa13.3□□□□□ -0.28
PKP3-201ENST00000331563 DAZ4Q86SG3 579 aaKnown RBP13.3□□□□□ -0.28
PKP3-201ENST00000331563 FAM223AQ8IWN6 122 aa13.3□□□□□ -0.28
PKP3-201ENST00000331563 RNF152Q8N8N0 203 aa13.3□□□□□ -0.28
PKP3-201ENST00000331563 DAZ1Q9NQZ3 744 aaKnown RBP13.3□□□□□ -0.28
PKP3-201ENST00000331563 DAZ3Q9NR90 486 aaKnown RBP13.3□□□□□ -0.28
PKP3-201ENST00000331563 KLK9Q9UKQ9 250 aa13.3□□□□□ -0.28
PKP3-201ENST00000331563 PYGO1Q9Y3Y4 419 aa13.3□□□□□ -0.28
PKP3-201ENST00000331563 ACANP16112 2415 aa13.29□□□□□ -0.28
PKP3-201ENST00000331563 TRAV13-1A0A0B4J241 112 aa13.29□□□□□ -0.28
PKP3-201ENST00000331563 IGHV3-16A0A0C4DH30 117 aa13.29□□□□□ -0.28
PKP3-201ENST00000331563 F8WDY8 70 aa13.29□□□□□ -0.28
PKP3-201ENST00000331563 RPL18AQ02543 176 aaKnown RBP13.28□□□□□ -0.28
PKP3-201ENST00000331563 CIRBPQ14011 172 aaKnown RBP13.27□□□□□ -0.28
PKP3-201ENST00000331563 C5orf56Q8N8D9 126 aa13.27□□□□□ -0.28
PKP3-201ENST00000331563 ZNF625Q96I27 306 aaPredicted RBP13.27□□□□□ -0.28
PKP3-201ENST00000331563 UPK3BQ9BT76 320 aa13.27□□□□□ -0.29
PKP3-201ENST00000331563 BAALC-AS2P0C853 105 aa13.26□□□□□ -0.29
PKP3-201ENST00000331563 HTN1P15515 57 aa13.26□□□□□ -0.29
PKP3-201ENST00000331563 SERP2Q8N6R1 65 aa13.26□□□□□ -0.29
PKP3-201ENST00000331563 HIST2H2BCQ6DN03 193 aa13.26□□□□□ -0.29
PKP3-201ENST00000331563 C9orf85Q96MD7 179 aa13.26□□□□□ -0.29
PKP3-201ENST00000331563 ITPR3Q14573 2671 aa13.26□□□□□ -0.29
PKP3-201ENST00000331563 COX7A2LO14548 114 aa13.26□□□□□ -0.29
PKP3-201ENST00000331563 MSMBP08118 114 aa13.26□□□□□ -0.29
PKP3-201ENST00000331563 MALP21145 153 aa13.26□□□□□ -0.29
PKP3-201ENST00000331563 PRO0628Q9UI54 55 aa13.26□□□□□ -0.29
PKP3-201ENST00000331563 GCN1Q92616 2671 aaKnown RBP13.25□□□□□ -0.29
PKP3-201ENST00000331563 H3BUX3 64 aa13.25□□□□□ -0.29
PKP3-201ENST00000331563 RS1O15537 224 aa13.25□□□□□ -0.29
PKP3-201ENST00000331563 J3QLI3 93 aa13.24□□□□□ -0.29
PKP3-201ENST00000331563 FLNAP21333 2647 aaKnown RBP13.24□□□□□ -0.29
PKP3-201ENST00000331563 KMT2BQ9UMN6 2715 aaPredicted RBP13.24□□□□□ -0.29
PKP3-201ENST00000331563 BLCAPP62952 87 aa13.24□□□□□ -0.29
PKP3-201ENST00000331563 TINCRA0A1B0GVN0 87 aa13.23□□□□□ -0.29
PKP3-201ENST00000331563 NOTCH2Q04721 2471 aa13.23□□□□□ -0.29
PKP3-201ENST00000331563 NACAE9PAV3 2078 aa13.23□□□□□ -0.29
PKP3-201ENST00000331563 EDN2P20800 178 aa13.22□□□□□ -0.29
PKP3-201ENST00000331563 TIRAPP58753 221 aa13.22□□□□□ -0.29
PKP3-201ENST00000331563 SORL1Q92673 2214 aa13.22□□□□□ -0.29
PKP3-201ENST00000331563 HECTD1Q9ULT8 2610 aa13.22□□□□□ -0.29
PKP3-201ENST00000331563 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.22□□□□□ -0.29
PKP3-201ENST00000331563 IGKV2-29A2NJV5 120 aaPredicted RBP13.22□□□□□ -0.29
PKP3-201ENST00000331563 SPINK13Q1W4C9 94 aa13.22□□□□□ -0.29
PKP3-201ENST00000331563 IGHV1OR15-1A0A075B7D0 117 aa13.21□□□□□ -0.29
PKP3-201ENST00000331563 LINC00308Q8TCZ7 52 aa13.21□□□□□ -0.29
PKP3-201ENST00000331563 PROK1P58294 105 aa13.21□□□□□ -0.29
PKP3-201ENST00000331563 FAM104AQ969W3 186 aa13.21□□□□□ -0.29
PKP3-201ENST00000331563 CDKN2A-AS1Q9UH64 79 aa13.21□□□□□ -0.29
PKP3-201ENST00000331563 MTORP42345 2549 aa13.21□□□□□ -0.29
PKP3-201ENST00000331563 FASNP49327 2511 aaKnown RBP13.21□□□□□ -0.3
PKP3-201ENST00000331563 Q8N2B8 174 aa13.21□□□□□ -0.3
PKP3-201ENST00000331563 MOB4Q9Y3A3 225 aa13.21□□□□□ -0.3
PKP3-201ENST00000331563 TIMM17BO60830 172 aa13.2□□□□□ -0.3
PKP3-201ENST00000331563 Q9H8V8 135 aa13.2□□□□□ -0.3
PKP3-201ENST00000331563 C1orf43Q9BWL3 253 aa13.19□□□□□ -0.3
PKP3-201ENST00000331563 B4DSR2 109 aa13.19□□□□□ -0.3
PKP3-201ENST00000331563 KNCNA6PVL3 124 aa13.18□□□□□ -0.3
PKP3-201ENST00000331563 INAFM2P0DMQ5 153 aa13.18□□□□□ -0.3
PKP3-201ENST00000331563 PFN2P35080 140 aa13.18□□□□□ -0.3
PKP3-201ENST00000331563 Q9HAA7 133 aa13.18□□□□□ -0.3
PKP3-201ENST00000331563 NDUFA1O15239 70 aa13.17□□□□□ -0.3
PKP3-201ENST00000331563 LINC00336Q6ZUF6 198 aa13.17□□□□□ -0.3
PKP3-201ENST00000331563 SYNJ2BPP57105 145 aa13.17□□□□□ -0.3
PKP3-201ENST00000331563 DGAT2L7PQ6IED9 249 aa13.17□□□□□ -0.3
PKP3-201ENST00000331563 HOXD3P31249 432 aaPredicted RBP13.16□□□□□ -0.3
PKP3-201ENST00000331563 IGHV3-38A0A0C4DH36 116 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms