RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 CAMK2N2Q96S95 79 aa14.08□□□□□ -0.16
NPLOC4-201ENST00000331134 MUC4Q99102 2169 aa14.07□□□□□ -0.16
NPLOC4-201ENST00000331134 RNF152Q8N8N0 203 aa14.07□□□□□ -0.16
NPLOC4-201ENST00000331134 CEP192Q8TEP8 1941 aa14.07□□□□□ -0.16
NPLOC4-201ENST00000331134 TRBV30A0A0K0K1B3 111 aa14.07□□□□□ -0.16
NPLOC4-201ENST00000331134 C16orf74Q96GX8 76 aa14.06□□□□□ -0.16
NPLOC4-201ENST00000331134 POLR2KP53803 58 aaKnown RBP14.06□□□□□ -0.16
NPLOC4-201ENST00000331134 IGF2-ASQ6U949 168 aa14.06□□□□□ -0.16
NPLOC4-201ENST00000331134 MAP6D1Q9H9H5 199 aa14.06□□□□□ -0.16
NPLOC4-201ENST00000331134 Q6ZSV7 163 aa14.06□□□□□ -0.16
NPLOC4-201ENST00000331134 SPANXCQ9NY87 97 aa14.06□□□□□ -0.16
NPLOC4-201ENST00000331134 JMJD7-PLA2G4BH0Y9G9 81 aa14.06□□□□□ -0.16
NPLOC4-201ENST00000331134 KLK12Q9UKR0 248 aa14.06□□□□□ -0.16
NPLOC4-201ENST00000331134 FBXL19-AS1Q494R0 122 aa14.05□□□□□ -0.16
NPLOC4-201ENST00000331134 TMEM258P61165 79 aa14.05□□□□□ -0.16
NPLOC4-201ENST00000331134 EBI3Q14213 229 aa14.05□□□□□ -0.16
NPLOC4-201ENST00000331134 UQCRQO14949 82 aa14.04□□□□□ -0.16
NPLOC4-201ENST00000331134 CDK2AP2O75956 126 aa14.04□□□□□ -0.16
NPLOC4-201ENST00000331134 RPL18AQ02543 176 aaKnown RBP14.04□□□□□ -0.16
NPLOC4-201ENST00000331134 SPAG11BQ08648 103 aa14.04□□□□□ -0.16
NPLOC4-201ENST00000331134 NREPQ16612 68 aa14.04□□□□□ -0.16
NPLOC4-201ENST00000331134 SCXQ7RTU7 201 aa14.04□□□□□ -0.16
NPLOC4-201ENST00000331134 F8P00451 2351 aa14.03□□□□□ -0.16
NPLOC4-201ENST00000331134 TSHBP01222 138 aa14.03□□□□□ -0.16
NPLOC4-201ENST00000331134 CNFNQ9BYD5 112 aa14.03□□□□□ -0.16
NPLOC4-201ENST00000331134 CHD9Q3L8U1 2897 aa14.03□□□□□ -0.16
NPLOC4-201ENST00000331134 C19orf84I3L1E1 186 aa14.03□□□□□ -0.16
NPLOC4-201ENST00000331134 DEFB135Q30KP9 77 aa14.02□□□□□ -0.16
NPLOC4-201ENST00000331134 APOC4P55056 127 aa14.02□□□□□ -0.16
NPLOC4-201ENST00000331134 ZMAT4Q9H898 229 aa14.02□□□□□ -0.17
NPLOC4-201ENST00000331134 CLPSL1A2RUU4 121 aa14.01□□□□□ -0.17
NPLOC4-201ENST00000331134 POM121L12Q8N7R1 296 aa14.01□□□□□ -0.17
NPLOC4-201ENST00000331134 ZNF580Q9UK33 172 aa14.01□□□□□ -0.17
NPLOC4-201ENST00000331134 CRYGDP07320 174 aa14.01□□□□□ -0.17
NPLOC4-201ENST00000331134 UBE2BP63146 152 aa14.01□□□□□ -0.17
NPLOC4-201ENST00000331134 C5orf47Q569G3 176 aa14.01□□□□□ -0.17
NPLOC4-201ENST00000331134 TRBV10-1A0A0K0K1A3 114 aa14□□□□□ -0.17
NPLOC4-201ENST00000331134 TSPEAR-AS2P59090 65 aa14□□□□□ -0.17
NPLOC4-201ENST00000331134 CPAMD8Q8IZJ3 1885 aa14□□□□□ -0.17
NPLOC4-201ENST00000331134 LRP4O75096 1905 aa14□□□□□ -0.17
NPLOC4-201ENST00000331134 FSTL3O95633 263 aa13.99□□□□□ -0.17
NPLOC4-201ENST00000331134 EDN2P20800 178 aa13.99□□□□□ -0.17
NPLOC4-201ENST00000331134 TMEM263Q8WUH6 116 aaKnown RBP13.99□□□□□ -0.17
NPLOC4-201ENST00000331134 H7C423 109 aa13.99□□□□□ -0.17
NPLOC4-201ENST00000331134 TMEM256-PLSCR3K7ERE1 68 aa13.99□□□□□ -0.17
NPLOC4-201ENST00000331134 ENHOQ6UWT2 76 aa13.99□□□□□ -0.17
NPLOC4-201ENST00000331134 FUSP35637 526 aaKnown RBP eCLIP13.98□□□□□ -0.177e-7■■□□□ 11.7
NPLOC4-201ENST00000331134 IGIPA6NJ69 53 aa13.98□□□□□ -0.17
NPLOC4-201ENST00000331134 LST1O00453 97 aa13.98□□□□□ -0.17
NPLOC4-201ENST00000331134 UBE2D1P51668 147 aa13.98□□□□□ -0.17
NPLOC4-201ENST00000331134 UPK3BQ9BT76 320 aa13.98□□□□□ -0.17
NPLOC4-201ENST00000331134 Q8N6K4 173 aa13.97□□□□□ -0.17
NPLOC4-201ENST00000331134 TRBV6-5A0A0K0K1A5 114 aa13.97□□□□□ -0.17
NPLOC4-201ENST00000331134 C3orf22Q8N5N4 141 aa13.97□□□□□ -0.17
NPLOC4-201ENST00000331134 ETDCA0A1B0GVM5 59 aa13.97□□□□□ -0.17
NPLOC4-201ENST00000331134 LINC00269Q8N2A0 174 aa13.96□□□□□ -0.17
NPLOC4-201ENST00000331134 NDUFA7O95182 113 aa13.96□□□□□ -0.18
NPLOC4-201ENST00000331134 PTPRBP23467 1997 aa13.95□□□□□ -0.18
NPLOC4-201ENST00000331134 NDUFA1O15239 70 aa13.95□□□□□ -0.18
NPLOC4-201ENST00000331134 CDSNQ15517 529 aa13.95□□□□□ -0.18
NPLOC4-201ENST00000331134 BRK1Q8WUW1 75 aa13.94□□□□□ -0.18
NPLOC4-201ENST00000331134 KLLNB2CW77 178 aa13.94□□□□□ -0.18
NPLOC4-201ENST00000331134 F8W735 103 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-201ENST00000331134 TNFRSF13BO14836 293 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-201ENST00000331134 LINC00526Q96FQ7 95 aa13.94□□□□□ -0.18
NPLOC4-201ENST00000331134 XAGE1AQ9HD64 81 aa13.94□□□□□ -0.18
NPLOC4-201ENST00000331134 USP24Q9UPU5 2620 aa13.94□□□□□ -0.18
NPLOC4-201ENST00000331134 TIRAPP58753 221 aa13.93□□□□□ -0.18
NPLOC4-201ENST00000331134 DIRC1Q969H9 104 aa13.93□□□□□ -0.18
NPLOC4-201ENST00000331134 PRUNE2Q8WUY3 3088 aa13.93□□□□□ -0.18
NPLOC4-201ENST00000331134 HIGD2BQ4VC39 106 aa13.93□□□□□ -0.18
NPLOC4-201ENST00000331134 DEFB113Q30KQ7 82 aa13.92□□□□□ -0.18
NPLOC4-201ENST00000331134 C6orf99Q4VX62 202 aa13.92□□□□□ -0.18
NPLOC4-201ENST00000331134 EXPH5Q8NEV8 1989 aa13.92□□□□□ -0.18
NPLOC4-201ENST00000331134 PRO0255Q9UI72 69 aa13.92□□□□□ -0.18
NPLOC4-201ENST00000331134 ODF3Q96PU9 254 aa13.91□□□□□ -0.18
NPLOC4-201ENST00000331134 IGLV4-69A0A075B6H9 119 aa13.91□□□□□ -0.18
NPLOC4-201ENST00000331134 SPART-AS1P0CW21 52 aa13.91□□□□□ -0.18
NPLOC4-201ENST00000331134 DEFB114Q30KQ6 69 aa13.91□□□□□ -0.18
NPLOC4-201ENST00000331134 WFDC9Q8NEX5 89 aa13.91□□□□□ -0.18
NPLOC4-201ENST00000331134 USP17L23D6RBM5 183 aa13.9□□□□□ -0.18
NPLOC4-201ENST00000331134 MPLKIPQ8TAP9 179 aa13.9□□□□□ -0.18
NPLOC4-201ENST00000331134 PYGO1Q9Y3Y4 419 aa13.9□□□□□ -0.18
NPLOC4-201ENST00000331134 LOC100131303A0A0U1RQF7 123 aa13.9□□□□□ -0.18
NPLOC4-201ENST00000331134 DCANP1Q8TF63 244 aa13.89□□□□□ -0.19
NPLOC4-201ENST00000331134 FAM110AQ9BQ89 295 aa13.89□□□□□ -0.19
NPLOC4-201ENST00000331134 UBE2D3P61077 147 aa13.89□□□□□ -0.19
NPLOC4-201ENST00000331134 UBE2D2P62837 147 aa13.89□□□□□ -0.19
NPLOC4-201ENST00000331134 C18orf65Q6ZTR6 163 aa13.89□□□□□ -0.19
NPLOC4-201ENST00000331134 NDUFS5O43920 106 aa13.88□□□□□ -0.19
NPLOC4-201ENST00000331134 UBE2D4Q9Y2X8 147 aa13.88□□□□□ -0.19
NPLOC4-201ENST00000331134 SZT2Q5T011 3432 aa13.88□□□□□ -0.19
NPLOC4-201ENST00000331134 VCANP13611 3396 aa13.88□□□□□ -0.19
NPLOC4-201ENST00000331134 TMEM89A2RUT3 159 aa13.88□□□□□ -0.19
NPLOC4-201ENST00000331134 TRIOO75962 3097 aa13.87□□□□□ -0.19
NPLOC4-201ENST00000331134 IGLV2-18A0A075B6J9 118 aa13.87□□□□□ -0.19
NPLOC4-201ENST00000331134 ADAMTSL4-AS1Q5T5F5 129 aa13.87□□□□□ -0.19
NPLOC4-201ENST00000331134 C11orf71Q6IPW1 123 aa13.87□□□□□ -0.19
NPLOC4-201ENST00000331134 C4orf3Q8WVX3 66 aa13.87□□□□□ -0.19
NPLOC4-201ENST00000331134 WFDC10AQ9H1F0 79 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms