RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 ZNF22P17026 224 aaPredicted RBP11.93□□□□□ -0.5
DDX41-201ENST00000330503 TMEM223A0PJW6 202 aa11.92□□□□□ -0.5
DDX41-201ENST00000330503 ZNF25P17030 456 aaPredicted RBP11.92□□□□□ -0.5
DDX41-201ENST00000330503 HERVK_113P61574 105 aa11.92□□□□□ -0.5
DDX41-201ENST00000330503 Q6ZVH6 145 aa11.92□□□□□ -0.5
DDX41-201ENST00000330503 MIFP14174 115 aa11.91□□□□□ -0.5
DDX41-201ENST00000330503 TSPEAR-AS2P59090 65 aa11.9□□□□□ -0.5
DDX41-201ENST00000330503 ORAOV1Q8WV07 137 aa11.9□□□□□ -0.5
DDX41-201ENST00000330503 PKD1L1Q8TDX9 2849 aa11.9□□□□□ -0.5
DDX41-201ENST00000330503 DGAT2L7PQ6IED9 249 aa11.9□□□□□ -0.5
DDX41-201ENST00000330503 CELA1Q9UNI1 258 aa11.89□□□□□ -0.51
DDX41-201ENST00000330503 CSDC2Q9Y534 153 aaKnown RBP11.89□□□□□ -0.51
DDX41-201ENST00000330503 TINCRA0A1B0GVN0 87 aa11.89□□□□□ -0.51
DDX41-201ENST00000330503 TAX1BP3O14907 124 aa11.89□□□□□ -0.51
DDX41-201ENST00000330503 UBE2D1P51668 147 aa11.89□□□□□ -0.51
DDX41-201ENST00000330503 TMEM243Q9BU79 118 aa11.89□□□□□ -0.51
DDX41-201ENST00000330503 DNAH3Q8TD57 4116 aa11.88□□□□□ -0.51
DDX41-201ENST00000330503 ZNF815PA8K554 130 aa11.88□□□□□ -0.51
DDX41-201ENST00000330503 SEC11AP67812 179 aa11.88□□□□□ -0.51
DDX41-201ENST00000330503 A8MZ25 164 aa11.87□□□□□ -0.51
DDX41-201ENST00000330503 GYPEP15421 78 aa11.87□□□□□ -0.51
DDX41-201ENST00000330503 PLEKHB2Q96CS7 222 aa11.87□□□□□ -0.51
DDX41-201ENST00000330503 PRO0255Q9UI72 69 aa11.87□□□□□ -0.51
DDX41-201ENST00000330503 MAST4O15021 2626 aa11.87□□□□□ -0.51
DDX41-201ENST00000330503 LEPROTO15243 131 aa11.87□□□□□ -0.51
DDX41-201ENST00000330503 CDC42SE2Q9NRR3 84 aa11.87□□□□□ -0.51
DDX41-201ENST00000330503 J3QQQ9 107 aa11.86□□□□□ -0.51
DDX41-201ENST00000330503 TRBV6-8A0A0A6YYG3 113 aa11.86□□□□□ -0.51
DDX41-201ENST00000330503 G3V4G9 280 aa11.86□□□□□ -0.51
DDX41-201ENST00000330503 DAD1P61803 113 aa11.86□□□□□ -0.51
DDX41-201ENST00000330503 COX11Q9Y6N1 276 aa11.86□□□□□ -0.51
DDX41-201ENST00000330503 H7C423 109 aa11.85□□□□□ -0.51
DDX41-201ENST00000330503 K7EP13 123 aa11.85□□□□□ -0.51
DDX41-201ENST00000330503 FXYD2P54710 66 aa11.85□□□□□ -0.51
DDX41-201ENST00000330503 COL6A5A8TX70 2615 aa11.85□□□□□ -0.51
DDX41-201ENST00000330503 IGHV3-64A0A075B6Q5 118 aa11.84□□□□□ -0.51
DDX41-201ENST00000330503 GCSHP23434 173 aa11.84□□□□□ -0.51
DDX41-201ENST00000330503 TIRAPP58753 221 aa11.84□□□□□ -0.51
DDX41-201ENST00000330503 COX6A2Q02221 97 aa11.84□□□□□ -0.51
DDX41-201ENST00000330503 CEND1Q8N111 149 aa11.84□□□□□ -0.51
DDX41-201ENST00000330503 VSIG2Q96IQ7 327 aa11.84□□□□□ -0.51
DDX41-201ENST00000330503 TM2D2Q9BX73 214 aa11.84□□□□□ -0.51
DDX41-201ENST00000330503 UBE2L6O14933 153 aa11.84□□□□□ -0.51
DDX41-201ENST00000330503 PAX4O43316 350 aa11.84□□□□□ -0.51
DDX41-201ENST00000330503 GAGE6Q13070 117 aa11.84□□□□□ -0.51
DDX41-201ENST00000330503 TAL2Q16559 108 aa11.84□□□□□ -0.51
DDX41-201ENST00000330503 OR5A1Q8NGJ0 315 aa11.84□□□□□ -0.51
DDX41-201ENST00000330503 ATP6V0E2Q8NHE4 81 aa11.84□□□□□ -0.51
DDX41-201ENST00000330503 SPART-AS1P0CW21 52 aa11.83□□□□□ -0.52
DDX41-201ENST00000330503 AMMECR1LQ6DCA0 310 aa11.83□□□□□ -0.52
DDX41-201ENST00000330503 FAM19A3Q7Z5A8 133 aa11.83□□□□□ -0.52
DDX41-201ENST00000330503 SMAGPQ0VAQ4 97 aa11.83□□□□□ -0.52
DDX41-201ENST00000330503 IGLV5-45A0A087WSX0 123 aa11.82□□□□□ -0.52
DDX41-201ENST00000330503 TRAV8-3A0A0A6YYJ7 113 aa11.82□□□□□ -0.52
DDX41-201ENST00000330503 A6NDN8 102 aa11.82□□□□□ -0.52
DDX41-201ENST00000330503 LGALS3P17931 250 aaKnown RBP11.82□□□□□ -0.52
DDX41-201ENST00000330503 LINC00242Q5T6M2 205 aa11.82□□□□□ -0.52
DDX41-201ENST00000330503 HIST1H4GQ99525 98 aa11.82□□□□□ -0.52
DDX41-201ENST00000330503 GEMIN7Q9H840 131 aaKnown RBP11.82□□□□□ -0.52
DDX41-201ENST00000330503 RETNQ9HD89 108 aa11.82□□□□□ -0.52
DDX41-201ENST00000330503 A0A0J9YY99 117 aa11.81□□□□□ -0.52
DDX41-201ENST00000330503 IGHV3-30-3P0DP02 117 aa11.81□□□□□ -0.52
DDX41-201ENST00000330503 LINC00469Q8N7U9 141 aa11.81□□□□□ -0.52
DDX41-201ENST00000330503 TMEM101Q96IK0 257 aa11.81□□□□□ -0.52
DDX41-201ENST00000330503 CDKN2A-AS1Q9UH64 79 aa11.81□□□□□ -0.52
DDX41-201ENST00000330503 ANK2Q01484 3957 aa11.81□□□□□ -0.52
DDX41-201ENST00000330503 ATP5G1P05496 136 aa11.81□□□□□ -0.52
DDX41-201ENST00000330503 SCGB1D4Q6XE38 83 aa11.81□□□□□ -0.52
DDX41-201ENST00000330503 IGHV1-58A0A0C4DH39 117 aa11.8□□□□□ -0.52
DDX41-201ENST00000330503 SPINK8P0C7L1 97 aa11.8□□□□□ -0.52
DDX41-201ENST00000330503 CHCHD5Q9BSY4 110 aa11.8□□□□□ -0.52
DDX41-201ENST00000330503 IGLV4-60A0A075B6I1 120 aa11.8□□□□□ -0.52
DDX41-201ENST00000330503 TRAV13-1A0A0B4J241 112 aa11.8□□□□□ -0.52
DDX41-201ENST00000330503 H3BRM9 83 aa11.8□□□□□ -0.52
DDX41-201ENST00000330503 SAMD5Q5TGI4 173 aa11.8□□□□□ -0.52
DDX41-201ENST00000330503 A0A096LPF7 62 aa11.79□□□□□ -0.52
DDX41-201ENST00000330503 F5H768 121 aa11.78□□□□□ -0.52
DDX41-201ENST00000330503 HERVK_113P63121 156 aa11.78□□□□□ -0.52
DDX41-201ENST00000330503 TRAV26-1A0A087WT03 109 aa11.77□□□□□ -0.52
DDX41-201ENST00000330503 PTTG1IPP53801 180 aa11.77□□□□□ -0.52
DDX41-201ENST00000330503 SMIM13P0DJ93 91 aa11.77□□□□□ -0.53
DDX41-201ENST00000330503 C12orf74Q32Q52 190 aa11.77□□□□□ -0.53
DDX41-201ENST00000330503 C10orf126Q8N4M7 172 aa11.77□□□□□ -0.53
DDX41-201ENST00000330503 HTN3P15516 51 aa11.75□□□□□ -0.53
DDX41-201ENST00000330503 K7ERJ3 54 aa11.75□□□□□ -0.53
DDX41-201ENST00000330503 SRSF9Q13242 221 aaKnown RBP eCLIP11.75□□□□□ -0.53
DDX41-201ENST00000330503 RAB37Q96AX2 223 aa11.75□□□□□ -0.53
DDX41-201ENST00000330503 SPANXB1Q9NS25 103 aaPredicted RBP11.75□□□□□ -0.53
DDX41-201ENST00000330503 NHP2Q9NX24 153 aaKnown RBP11.75□□□□□ -0.53
DDX41-201ENST00000330503 C9orf118A6NHY6 69 aa11.74□□□□□ -0.53
DDX41-201ENST00000330503 IGLV5-39A0A0G2JS06 123 aa11.74□□□□□ -0.53
DDX41-201ENST00000330503 A0A0J9YXY3 114 aa11.74□□□□□ -0.53
DDX41-201ENST00000330503 TEX48A0A1B0GUV7 120 aa11.73□□□□□ -0.53
DDX41-201ENST00000330503 IGHV3-30P01768 117 aa11.72□□□□□ -0.53
DDX41-201ENST00000330503 IGHV3-30-5P0DP03 117 aa11.72□□□□□ -0.53
DDX41-201ENST00000330503 NDUFA12Q9UI09 145 aa11.72□□□□□ -0.53
DDX41-201ENST00000330503 A0A1B0GUV1 79 aa11.72□□□□□ -0.53
DDX41-201ENST00000330503 TMEM262E9PQX1 116 aa11.72□□□□□ -0.53
DDX41-201ENST00000330503 PRB2P02812 416 aaPredicted RBP11.72□□□□□ -0.53
DDX41-201ENST00000330503 RBX1P62877 108 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms