RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 EIF4EBP3O60516 100 aaPredicted RBP10.4□□□□□ -0.74
TPM3-206ENST00000330188 C16orf74Q96GX8 76 aa10.4□□□□□ -0.74
TPM3-206ENST00000330188 LITAFQ99732 161 aa10.4□□□□□ -0.74
TPM3-206ENST00000330188 PRO1854Q9UHT4 67 aa10.4□□□□□ -0.74
TPM3-206ENST00000330188 NDUFA12Q9UI09 145 aa10.4□□□□□ -0.74
TPM3-206ENST00000330188 A8MZ25 164 aa10.39□□□□□ -0.75
TPM3-206ENST00000330188 TIRAPP58753 221 aa10.39□□□□□ -0.75
TPM3-206ENST00000330188 NTM-AS1Q6ZSK4 140 aa10.39□□□□□ -0.75
TPM3-206ENST00000330188 CSNK1G2-AS1Q8NCQ2 148 aa10.39□□□□□ -0.75
TPM3-206ENST00000330188 SMR3AQ99954 134 aa10.39□□□□□ -0.75
TPM3-206ENST00000330188 GEMIN7Q9H840 131 aaKnown RBP10.39□□□□□ -0.75
TPM3-206ENST00000330188 IGLV5-45A0A087WSX0 123 aa10.39□□□□□ -0.75
TPM3-206ENST00000330188 LINC00694P0DN24 101 aa10.39□□□□□ -0.75
TPM3-206ENST00000330188 C21orf62-AS1Q17RA5 79 aa10.39□□□□□ -0.75
TPM3-206ENST00000330188 DGAT2L7PQ6IED9 249 aa10.39□□□□□ -0.75
TPM3-206ENST00000330188 SH2D6Q7Z4S9 175 aa10.39□□□□□ -0.75
TPM3-206ENST00000330188 DAZ4Q86SG3 579 aaKnown RBP10.39□□□□□ -0.75
TPM3-206ENST00000330188 DAZ3Q9NR90 486 aaKnown RBP10.39□□□□□ -0.75
TPM3-206ENST00000330188 CDKN2A-AS1Q9UH64 79 aa10.39□□□□□ -0.75
TPM3-206ENST00000330188 PSMB2P49721 201 aa10.38□□□□□ -0.75
TPM3-206ENST00000330188 LYRM7Q5U5X0 104 aa10.38□□□□□ -0.75
TPM3-206ENST00000330188 ITPR2Q14571 2701 aa10.38□□□□□ -0.75
TPM3-206ENST00000330188 A0A0B4J2C4 111 aa10.37□□□□□ -0.75
TPM3-206ENST00000330188 GAGE12JA6NER3 117 aa10.37□□□□□ -0.75
TPM3-206ENST00000330188 GAGE4Q13068 117 aa10.37□□□□□ -0.75
TPM3-206ENST00000330188 GAGE5Q13069 117 aa10.37□□□□□ -0.75
TPM3-206ENST00000330188 ETDBQ3ZM63 59 aa10.37□□□□□ -0.75
TPM3-206ENST00000330188 SBSPONQ8IVN8 264 aa10.37□□□□□ -0.75
TPM3-206ENST00000330188 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.37□□□□□ -0.75
TPM3-206ENST00000330188 C1QTNF4Q9BXJ3 329 aa10.37□□□□□ -0.75
TPM3-206ENST00000330188 KRTAP10-3P60369 221 aa10.37□□□□□ -0.75
TPM3-206ENST00000330188 ZFAND6Q6FIF0 208 aa10.37□□□□□ -0.75
TPM3-206ENST00000330188 SETXQ7Z333 2677 aaKnown RBP10.37□□□□□ -0.75
TPM3-206ENST00000330188 GAGE7O76087 117 aa10.36□□□□□ -0.75
TPM3-206ENST00000330188 IGHV3-33P01772 117 aa10.36□□□□□ -0.75
TPM3-206ENST00000330188 GAGE12FP0CL80 117 aa10.36□□□□□ -0.75
TPM3-206ENST00000330188 GAGE12GP0CL81 117 aa10.36□□□□□ -0.75
TPM3-206ENST00000330188 GAGE12IP0CL82 117 aa10.36□□□□□ -0.75
TPM3-206ENST00000330188 COX6A2Q02221 97 aa10.36□□□□□ -0.75
TPM3-206ENST00000330188 OVOL2Q9BRP0 275 aa10.36□□□□□ -0.75
TPM3-206ENST00000330188 SPANXDQ9BXN6 97 aa10.36□□□□□ -0.75
TPM3-206ENST00000330188 SPANXCQ9NY87 97 aa10.36□□□□□ -0.75
TPM3-206ENST00000330188 CSDC2Q9Y534 153 aaKnown RBP10.36□□□□□ -0.75
TPM3-206ENST00000330188 TCL1BO95988 128 aa10.36□□□□□ -0.75
TPM3-206ENST00000330188 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
TPM3-206ENST00000330188 ADAMTSL4-AS1Q5T5F5 129 aa10.36□□□□□ -0.75
TPM3-206ENST00000330188 MTORP42345 2549 aa10.35□□□□□ -0.75
TPM3-206ENST00000330188 TRGV2A0A075B6R0 118 aa10.35□□□□□ -0.75
TPM3-206ENST00000330188 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.35□□□□□ -0.75
TPM3-206ENST00000330188 LINC00242Q5T6M2 205 aa10.35□□□□□ -0.75
TPM3-206ENST00000330188 FAM19A3Q7Z5A8 133 aa10.35□□□□□ -0.75
TPM3-206ENST00000330188 TMEM101Q96IK0 257 aa10.34□□□□□ -0.75
TPM3-206ENST00000330188 SETD2Q9BYW2 2564 aaPredicted RBP10.34□□□□□ -0.75
TPM3-206ENST00000330188 TRBV20-1A0A075B6N2 111 aa10.34□□□□□ -0.75
TPM3-206ENST00000330188 HERVK_113P63121 156 aa10.34□□□□□ -0.75
TPM3-206ENST00000330188 MIAQ16674 131 aa10.33□□□□□ -0.76
TPM3-206ENST00000330188 GTSF1LQ9H1H1 148 aa10.33□□□□□ -0.76
TPM3-206ENST00000330188 ERG28Q9UKR5 140 aa10.33□□□□□ -0.76
TPM3-206ENST00000330188 NIPBLQ6KC79 2804 aaeCLIP10.33□□□□□ -0.766e-7■■■□□ 15
TPM3-206ENST00000330188 LOC100131303A0A0U1RQF7 123 aa10.33□□□□□ -0.76
TPM3-206ENST00000330188 TRBV6-4A0A1B0GX49 114 aa10.33□□□□□ -0.76
TPM3-206ENST00000330188 CIDEAO60543 219 aa10.33□□□□□ -0.76
TPM3-206ENST00000330188 CDC42SE2Q9NRR3 84 aa10.33□□□□□ -0.76
TPM3-206ENST00000330188 UNC79Q9P2D8 2635 aa10.32□□□□□ -0.76
TPM3-206ENST00000330188 IGLV5-39A0A0G2JS06 123 aa10.32□□□□□ -0.76
TPM3-206ENST00000330188 NDUFA1O15239 70 aa10.32□□□□□ -0.76
TPM3-206ENST00000330188 PRSS2P07478 247 aa10.32□□□□□ -0.76
TPM3-206ENST00000330188 SCGB1C2P0DMR2 95 aa10.32□□□□□ -0.76
TPM3-206ENST00000330188 JMJD1CQ15652 2540 aa10.32□□□□□ -0.76
TPM3-206ENST00000330188 TIMM17BO60830 172 aa10.31□□□□□ -0.76
TPM3-206ENST00000330188 LY6G6DO95868 133 aa10.31□□□□□ -0.76
TPM3-206ENST00000330188 PF4P02776 101 aa10.31□□□□□ -0.76
TPM3-206ENST00000330188 LINC00482Q8N8I6 264 aa10.31□□□□□ -0.76
TPM3-206ENST00000330188 HELZ2Q9BYK8 2649 aaKnown RBP10.31□□□□□ -0.76
TPM3-206ENST00000330188 TRAV13-1A0A0B4J241 112 aa10.31□□□□□ -0.76
TPM3-206ENST00000330188 H7C2G1 150 aa10.31□□□□□ -0.76
TPM3-206ENST00000330188 SMAGPQ0VAQ4 97 aa10.31□□□□□ -0.76
TPM3-206ENST00000330188 TMEM243Q9BU79 118 aa10.31□□□□□ -0.76
TPM3-206ENST00000330188 NOTCH3Q9UM47 2321 aa10.31□□□□□ -0.76
TPM3-206ENST00000330188 TRGV4A0A0C4DH28 118 aa10.3□□□□□ -0.76
TPM3-206ENST00000330188 J3QR89 54 aa10.3□□□□□ -0.76
TPM3-206ENST00000330188 SMIM1B2RUZ4 78 aa10.3□□□□□ -0.76
TPM3-206ENST00000330188 INSL3P51460 131 aa10.3□□□□□ -0.76
TPM3-206ENST00000330188 ATP6V0E2Q8NHE4 81 aa10.3□□□□□ -0.76
TPM3-206ENST00000330188 UBE2L6O14933 153 aa10.29□□□□□ -0.76
TPM3-206ENST00000330188 NPC2P61916 151 aa10.29□□□□□ -0.76
TPM3-206ENST00000330188 FHL2Q14192 279 aa10.29□□□□□ -0.76
TPM3-206ENST00000330188 Q1RN00 199 aa10.28□□□□□ -0.76
TPM3-206ENST00000330188 HIVEP2P31629 2446 aa10.27□□□□□ -0.76
TPM3-206ENST00000330188 F5H768 121 aa10.27□□□□□ -0.77
TPM3-206ENST00000330188 H7C423 109 aa10.27□□□□□ -0.77
TPM3-206ENST00000330188 IFITM1P13164 125 aa10.27□□□□□ -0.77
TPM3-206ENST00000330188 RNF183Q96D59 192 aa10.27□□□□□ -0.77
TPM3-206ENST00000330188 Q9H8V8 135 aa10.27□□□□□ -0.77
TPM3-206ENST00000330188 FASNP49327 2511 aaKnown RBP10.27□□□□□ -0.77
TPM3-206ENST00000330188 FOXI1Q12951 378 aa10.27□□□□□ -0.77
TPM3-206ENST00000330188 DAND5Q8N907 189 aa10.27□□□□□ -0.77
TPM3-206ENST00000330188 TRBV30A0A0K0K1B3 111 aa10.26□□□□□ -0.77
TPM3-206ENST00000330188 CRLF1O75462 422 aa10.25□□□□□ -0.77
TPM3-206ENST00000330188 TRIAP1O43715 76 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms