RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 LINC00467Q9BRT7 94 aa11.13□□□□□ -0.63
BRCC3-201ENST00000330045 IGHV3-38A0A0C4DH36 116 aa11.13□□□□□ -0.63
BRCC3-201ENST00000330045 INSP01308 110 aa11.12□□□□□ -0.63
BRCC3-201ENST00000330045 SPINK8P0C7L1 97 aa11.12□□□□□ -0.63
BRCC3-201ENST00000330045 BEAN1Q3B7T3 259 aa11.12□□□□□ -0.63
BRCC3-201ENST00000330045 Q6ZUT4 128 aa11.12□□□□□ -0.63
BRCC3-201ENST00000330045 SPANXDQ9BXN6 97 aa11.12□□□□□ -0.63
BRCC3-201ENST00000330045 SPANXCQ9NY87 97 aa11.12□□□□□ -0.63
BRCC3-201ENST00000330045 DEFB114Q30KQ6 69 aa11.12□□□□□ -0.63
BRCC3-201ENST00000330045 ADAMTSL4-AS1Q5T5F5 129 aa11.12□□□□□ -0.63
BRCC3-201ENST00000330045 A8MZ25 164 aa11.11□□□□□ -0.63
BRCC3-201ENST00000330045 M0QXV9 152 aa11.11□□□□□ -0.63
BRCC3-201ENST00000330045 TRBV30A0A0K0K1B3 111 aa11.11□□□□□ -0.63
BRCC3-201ENST00000330045 RS1O15537 224 aa11.11□□□□□ -0.63
BRCC3-201ENST00000330045 ATXN8Q156A1 80 aa11.11□□□□□ -0.63
BRCC3-201ENST00000330045 SMR3AQ99954 134 aa11.11□□□□□ -0.63
BRCC3-201ENST00000330045 GEMIN7Q9H840 131 aaKnown RBP11.11□□□□□ -0.63
BRCC3-201ENST00000330045 A0A1B0GV72 72 aa11.1□□□□□ -0.63
BRCC3-201ENST00000330045 MIAQ16674 131 aa11.1□□□□□ -0.63
BRCC3-201ENST00000330045 MT-ATP8P03928 68 aa11.09□□□□□ -0.63
BRCC3-201ENST00000330045 TRIAP1O43715 76 aa11.09□□□□□ -0.63
BRCC3-201ENST00000330045 CIDEAO60543 219 aa11.09□□□□□ -0.63
BRCC3-201ENST00000330045 XGP55808 180 aa11.09□□□□□ -0.63
BRCC3-201ENST00000330045 ZFAND6Q6FIF0 208 aa11.09□□□□□ -0.63
BRCC3-201ENST00000330045 LINC01620Q4KN68 170 aa11.08□□□□□ -0.64
BRCC3-201ENST00000330045 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
BRCC3-201ENST00000330045 CDKN2A-AS1Q9UH64 79 aa11.08□□□□□ -0.64
BRCC3-201ENST00000330045 NIPBLQ6KC79 2804 aaeCLIP11.07□□□□□ -0.647e-6■□□□□ 10.5
BRCC3-201ENST00000330045 NPC2P61916 151 aa11.07□□□□□ -0.64
BRCC3-201ENST00000330045 DGAT2L7PQ6IED9 249 aa11.07□□□□□ -0.64
BRCC3-201ENST00000330045 ESM1Q9NQ30 184 aa11.07□□□□□ -0.64
BRCC3-201ENST00000330045 TMEM262E9PQX1 116 aa11.07□□□□□ -0.64
BRCC3-201ENST00000330045 TIRAPP58753 221 aa11.07□□□□□ -0.64
BRCC3-201ENST00000330045 CKS1BP61024 79 aa11.06□□□□□ -0.64
BRCC3-201ENST00000330045 CLUHP3Q96NS8 147 aa11.06□□□□□ -0.64
BRCC3-201ENST00000330045 YAE1D1Q9NRH1 226 aa11.06□□□□□ -0.64
BRCC3-201ENST00000330045 ICOSQ9Y6W8 199 aa11.06□□□□□ -0.64
BRCC3-201ENST00000330045 IGHV3OR16-12A0A075B7B8 117 aa11.05□□□□□ -0.64
BRCC3-201ENST00000330045 IGLV5-45A0A087WSX0 123 aa11.05□□□□□ -0.64
BRCC3-201ENST00000330045 TIMM17BO60830 172 aa11.05□□□□□ -0.64
BRCC3-201ENST00000330045 ODF3L2Q3SX64 289 aa11.05□□□□□ -0.64
BRCC3-201ENST00000330045 STHQ8IWL8 128 aa11.05□□□□□ -0.64
BRCC3-201ENST00000330045 TMEM101Q96IK0 257 aa11.05□□□□□ -0.64
BRCC3-201ENST00000330045 NTN5Q8WTR8 489 aaPredicted RBP11.04□□□□□ -0.64
BRCC3-201ENST00000330045 RNF183Q96D59 192 aa11.04□□□□□ -0.64
BRCC3-201ENST00000330045 TRBV10-2A0A0K0K1G8 114 aa11.04□□□□□ -0.64
BRCC3-201ENST00000330045 Q6ZSV7 163 aa11.04□□□□□ -0.64
BRCC3-201ENST00000330045 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.04□□□□□ -0.64
BRCC3-201ENST00000330045 LINC01600Q96MT4 127 aa11.04□□□□□ -0.64
BRCC3-201ENST00000330045 TRGV1A0A0A0MS02 117 aa11.03□□□□□ -0.64
BRCC3-201ENST00000330045 DNAJC9-AS1A6NH13 148 aa11.03□□□□□ -0.64
BRCC3-201ENST00000330045 NDUFA1O15239 70 aa11.03□□□□□ -0.64
BRCC3-201ENST00000330045 COX6CP09669 75 aa11.03□□□□□ -0.64
BRCC3-201ENST00000330045 IFITM1P13164 125 aa11.03□□□□□ -0.64
BRCC3-201ENST00000330045 C1orf158Q8N1D5 194 aa11.03□□□□□ -0.64
BRCC3-201ENST00000330045 COX6A2Q02221 97 aa11.03□□□□□ -0.64
BRCC3-201ENST00000330045 TRAV25A0A0B4J276 109 aa11.02□□□□□ -0.65
BRCC3-201ENST00000330045 DAND5Q8N907 189 aa11.02□□□□□ -0.65
BRCC3-201ENST00000330045 IL17DQ8TAD2 202 aa11.02□□□□□ -0.65
BRCC3-201ENST00000330045 HERVK_113P63121 156 aa11.01□□□□□ -0.65
BRCC3-201ENST00000330045 C11orf44Q8N8P7 122 aa11.01□□□□□ -0.65
BRCC3-201ENST00000330045 CIRBPQ14011 172 aaKnown RBP11.01□□□□□ -0.65
BRCC3-201ENST00000330045 LINC00242Q5T6M2 205 aa11.01□□□□□ -0.65
BRCC3-201ENST00000330045 SETXQ7Z333 2677 aaKnown RBP11.01□□□□□ -0.65
BRCC3-201ENST00000330045 HIVEP2P31629 2446 aa11□□□□□ -0.65
BRCC3-201ENST00000330045 LINC00694P0DN24 101 aa11□□□□□ -0.65
BRCC3-201ENST00000330045 RPL36AP83881 106 aaKnown RBP11□□□□□ -0.65
BRCC3-201ENST00000330045 RPL36ALQ969Q0 106 aaKnown RBP11□□□□□ -0.65
BRCC3-201ENST00000330045 RPL13AP40429 203 aaKnown RBP11□□□□□ -0.65
BRCC3-201ENST00000330045 TMEM86BQ8N661 226 aa11□□□□□ -0.65
BRCC3-201ENST00000330045 FLNBO75369 2602 aaKnown RBP11□□□□□ -0.65
BRCC3-201ENST00000330045 IGLV5-39A0A0G2JS06 123 aa10.99□□□□□ -0.65
BRCC3-201ENST00000330045 TEX49A0A1B0GTD5 131 aa10.99□□□□□ -0.65
BRCC3-201ENST00000330045 A0A1W2PRX2 142 aa10.99□□□□□ -0.65
BRCC3-201ENST00000330045 K7EQD1 137 aa10.99□□□□□ -0.65
BRCC3-201ENST00000330045 HIVEP1P15822 2718 aa10.99□□□□□ -0.65
BRCC3-201ENST00000330045 TRBV10-1A0A0K0K1A3 114 aa10.99□□□□□ -0.65
BRCC3-201ENST00000330045 H7C423 109 aa10.99□□□□□ -0.65
BRCC3-201ENST00000330045 C2orf82Q6UX34 121 aa10.99□□□□□ -0.65
BRCC3-201ENST00000330045 Q6ZTI0 123 aa10.99□□□□□ -0.65
BRCC3-201ENST00000330045 Q9H8V8 135 aa10.99□□□□□ -0.65
BRCC3-201ENST00000330045 WNK1Q9H4A3 2382 aa10.98□□□□□ -0.65
BRCC3-201ENST00000330045 NTM-AS1Q6ZSK4 140 aa10.98□□□□□ -0.65
BRCC3-201ENST00000330045 CLEC2BQ92478 149 aa10.98□□□□□ -0.65
BRCC3-201ENST00000330045 CSDC2Q9Y534 153 aaKnown RBP10.98□□□□□ -0.65
BRCC3-201ENST00000330045 NDUFA7O95182 113 aa10.98□□□□□ -0.65
BRCC3-201ENST00000330045 DAZ2Q13117 558 aaKnown RBP10.98□□□□□ -0.65
BRCC3-201ENST00000330045 FAM19A3Q7Z5A8 133 aa10.98□□□□□ -0.65
BRCC3-201ENST00000330045 DAZ4Q86SG3 579 aaKnown RBP10.98□□□□□ -0.65
BRCC3-201ENST00000330045 UBE2WQ96B02 151 aa10.98□□□□□ -0.65
BRCC3-201ENST00000330045 DAZ3Q9NR90 486 aaKnown RBP10.98□□□□□ -0.65
BRCC3-201ENST00000330045 CCL24O00175 119 aa10.97□□□□□ -0.65
BRCC3-201ENST00000330045 TRAV13-1A0A0B4J241 112 aa10.97□□□□□ -0.65
BRCC3-201ENST00000330045 H3BT86 120 aa10.97□□□□□ -0.65
BRCC3-201ENST00000330045 LST1O00453 97 aa10.97□□□□□ -0.65
BRCC3-201ENST00000330045 LINC00308Q8TCZ7 52 aa10.97□□□□□ -0.65
BRCC3-201ENST00000330045 ZNF625Q96I27 306 aaPredicted RBP10.97□□□□□ -0.65
BRCC3-201ENST00000330045 TRAV4A0A0B4J268 109 aa10.96□□□□□ -0.65
BRCC3-201ENST00000330045 SMIM1B2RUZ4 78 aa10.96□□□□□ -0.65
BRCC3-201ENST00000330045 CITED2Q99967 270 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms