RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 LINC00269Q8N2A0 174 aa11.19□□□□□ -0.62
CLDN6-201ENST00000328796 PRELID3AQ96N28 172 aa11.19□□□□□ -0.62
CLDN6-201ENST00000328796 KRTAP10-2P60368 255 aa11.18□□□□□ -0.62
CLDN6-201ENST00000328796 COA6Q5JTJ3 125 aaKnown RBP11.18□□□□□ -0.62
CLDN6-201ENST00000328796 MAPKAPK5-AS1Q8N8E1 139 aa11.18□□□□□ -0.62
CLDN6-201ENST00000328796 KIR2DL4Q99706 377 aa11.18□□□□□ -0.62
CLDN6-201ENST00000328796 SMIM2Q9BVW6 85 aa11.18□□□□□ -0.62
CLDN6-201ENST00000328796 LAMTOR2Q9Y2Q5 125 aa11.18□□□□□ -0.62
CLDN6-201ENST00000328796 FGF6P10767 208 aa11.17□□□□□ -0.62
CLDN6-201ENST00000328796 REG3AQ06141 175 aa11.17□□□□□ -0.62
CLDN6-201ENST00000328796 AMMECR1LQ6DCA0 310 aa11.17□□□□□ -0.62
CLDN6-201ENST00000328796 C1orf43Q9BWL3 253 aa11.17□□□□□ -0.62
CLDN6-201ENST00000328796 FCER1GP30273 86 aa11.16□□□□□ -0.62
CLDN6-201ENST00000328796 CLPSL2Q6UWE3 100 aa11.16□□□□□ -0.62
CLDN6-201ENST00000328796 PRSS47A8MTI9 375 aa11.16□□□□□ -0.62
CLDN6-201ENST00000328796 TCAPO15273 167 aa11.16□□□□□ -0.62
CLDN6-201ENST00000328796 ZNF25P17030 456 aaPredicted RBP11.16□□□□□ -0.62
CLDN6-201ENST00000328796 MRPL52Q86TS9 123 aaKnown RBP11.16□□□□□ -0.62
CLDN6-201ENST00000328796 DNAH5Q8TE73 4624 aa11.15□□□□□ -0.62
CLDN6-201ENST00000328796 WFDC2Q14508 124 aa11.15□□□□□ -0.63
CLDN6-201ENST00000328796 RNASEKQ6P5S7 137 aaKnown RBP11.15□□□□□ -0.63
CLDN6-201ENST00000328796 KRTAP26-1Q6PEX3 210 aa11.15□□□□□ -0.63
CLDN6-201ENST00000328796 KRTAP17-1Q9BYP8 105 aa11.15□□□□□ -0.63
CLDN6-201ENST00000328796 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
CLDN6-201ENST00000328796 TRAV8-4A0A0B4J246 113 aa11.13□□□□□ -0.63
CLDN6-201ENST00000328796 C16orf90A8MZG2 172 aa11.13□□□□□ -0.63
CLDN6-201ENST00000328796 CDPF1Q6NVV7 123 aa11.13□□□□□ -0.63
CLDN6-201ENST00000328796 BAALCQ8WXS3 180 aa11.13□□□□□ -0.63
CLDN6-201ENST00000328796 LRP1BQ9NZR2 4599 aa11.13□□□□□ -0.63
CLDN6-201ENST00000328796 S100A2P29034 98 aa11.12□□□□□ -0.63
CLDN6-201ENST00000328796 AKR1D1P51857 326 aa11.12□□□□□ -0.63
CLDN6-201ENST00000328796 HIST3H2BBQ8N257 126 aa11.12□□□□□ -0.63
CLDN6-201ENST00000328796 Q8N814 137 aa11.12□□□□□ -0.63
CLDN6-201ENST00000328796 OR5A1Q8NGJ0 315 aa11.12□□□□□ -0.63
CLDN6-201ENST00000328796 TMEM101Q96IK0 257 aa11.12□□□□□ -0.63
CLDN6-201ENST00000328796 MAP1LC3AQ9H492 121 aa11.12□□□□□ -0.63
CLDN6-201ENST00000328796 CSDC2Q9Y534 153 aaKnown RBP11.11□□□□□ -0.63
CLDN6-201ENST00000328796 IGLV10-54A0A075B6I4 117 aa11.1□□□□□ -0.63
CLDN6-201ENST00000328796 LECT2O14960 151 aa11.1□□□□□ -0.63
CLDN6-201ENST00000328796 SMAGPQ0VAQ4 97 aa11.1□□□□□ -0.63
CLDN6-201ENST00000328796 KIAA1644Q3SXP7 199 aa11.1□□□□□ -0.63
CLDN6-201ENST00000328796 NTN5Q8WTR8 489 aaPredicted RBP11.1□□□□□ -0.63
CLDN6-201ENST00000328796 TMEM18Q96B42 140 aa11.1□□□□□ -0.63
CLDN6-201ENST00000328796 TIMM21Q9BVV7 248 aa11.1□□□□□ -0.63
CLDN6-201ENST00000328796 CDC42SE2Q9NRR3 84 aa11.1□□□□□ -0.63
CLDN6-201ENST00000328796 UBE2D4Q9Y2X8 147 aa11.1□□□□□ -0.63
CLDN6-201ENST00000328796 LOC389332A0A1B0GUA5 103 aa11.09□□□□□ -0.63
CLDN6-201ENST00000328796 FUSP35637 526 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLDN6-201ENST00000328796 Q8N8P6 123 aa11.09□□□□□ -0.63
CLDN6-201ENST00000328796 KIAA1109Q2LD37 5005 aa11.09□□□□□ -0.63
CLDN6-201ENST00000328796 ZNF664Q8N3J9 261 aa11.08□□□□□ -0.64
CLDN6-201ENST00000328796 IGKV3OR2-268A0A0C4DH90 116 aa11.07□□□□□ -0.64
CLDN6-201ENST00000328796 RPL39P62891 51 aaKnown RBP11.07□□□□□ -0.64
CLDN6-201ENST00000328796 DGAT2L7PQ6IED9 249 aa11.07□□□□□ -0.64
CLDN6-201ENST00000328796 BAGE3Q86Y29 109 aa11.07□□□□□ -0.64
CLDN6-201ENST00000328796 IFITM10A6NMD0 228 aa11.06□□□□□ -0.64
CLDN6-201ENST00000328796 ALKBH7Q9BT30 221 aaPredicted RBP11.06□□□□□ -0.64
CLDN6-201ENST00000328796 NXT2Q9NPJ8 142 aaKnown RBP11.06□□□□□ -0.64
CLDN6-201ENST00000328796 USP17L23D6RBM5 183 aa11.05□□□□□ -0.64
CLDN6-201ENST00000328796 K7EMI3 77 aa11.05□□□□□ -0.64
CLDN6-201ENST00000328796 C14orf177Q52M58 125 aa11.05□□□□□ -0.64
CLDN6-201ENST00000328796 SPANXA1Q9NS26 97 aa11.05□□□□□ -0.64
CLDN6-201ENST00000328796 IGLV5-52A0A0A0MRZ9 124 aa11.04□□□□□ -0.64
CLDN6-201ENST00000328796 LINC00959A0A1B0GUT2 108 aa11.04□□□□□ -0.64
CLDN6-201ENST00000328796 SMIM6P0DI80 62 aa11.04□□□□□ -0.64
CLDN6-201ENST00000328796 IFI27P40305 119 aaPredicted RBP11.04□□□□□ -0.64
CLDN6-201ENST00000328796 LINC00518Q8N0U6 118 aa11.04□□□□□ -0.64
CLDN6-201ENST00000328796 CHCHD10Q8WYQ3 142 aaPredicted RBP11.04□□□□□ -0.64
CLDN6-201ENST00000328796 FAM104AQ969W3 186 aa11.04□□□□□ -0.64
CLDN6-201ENST00000328796 PACRGQ96M98 296 aaPredicted RBP11.04□□□□□ -0.64
CLDN6-201ENST00000328796 HIST1H2BLQ99880 126 aa11.04□□□□□ -0.64
CLDN6-201ENST00000328796 HERC2O95714 4834 aa11.04□□□□□ -0.64
CLDN6-201ENST00000328796 PDZD11Q5EBL8 140 aa11.03□□□□□ -0.64
CLDN6-201ENST00000328796 Q6ZUT4 128 aa11.03□□□□□ -0.64
CLDN6-201ENST00000328796 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.03□□□□□ -0.64
CLDN6-201ENST00000328796 GAGE12HA6NDE8 117 aa11.03□□□□□ -0.64
CLDN6-201ENST00000328796 FABP4P15090 132 aa11.03□□□□□ -0.64
CLDN6-201ENST00000328796 MRPS36P82909 103 aaKnown RBP11.03□□□□□ -0.64
CLDN6-201ENST00000328796 ORMDL2Q53FV1 153 aa11.03□□□□□ -0.64
CLDN6-201ENST00000328796 C18orf32Q8TCD1 76 aa11.03□□□□□ -0.64
CLDN6-201ENST00000328796 GCSHP23434 173 aa11.02□□□□□ -0.65
CLDN6-201ENST00000328796 KRTAP10-1P60331 282 aa11.02□□□□□ -0.65
CLDN6-201ENST00000328796 RNASE13Q5GAN3 156 aaKnown RBP11.02□□□□□ -0.65
CLDN6-201ENST00000328796 OR10D4PQ8NGN7 298 aa11.02□□□□□ -0.65
CLDN6-201ENST00000328796 PYGO1Q9Y3Y4 419 aa11.02□□□□□ -0.65
CLDN6-201ENST00000328796 APOBP04114 4563 aaKnown RBP11.01□□□□□ -0.65
CLDN6-201ENST00000328796 RYR1P21817 5038 aa11.01□□□□□ -0.65
CLDN6-201ENST00000328796 CCL25O15444 150 aa11.01□□□□□ -0.65
CLDN6-201ENST00000328796 SERF1AO75920 110 aa11.01□□□□□ -0.65
CLDN6-201ENST00000328796 PRSS1P07477 247 aa11.01□□□□□ -0.65
CLDN6-201ENST00000328796 SS18Q15532 418 aa11.01□□□□□ -0.65
CLDN6-201ENST00000328796 CYSLTR1Q9Y271 337 aa11.01□□□□□ -0.65
CLDN6-201ENST00000328796 LINC01546A6NGU7 62 aa11□□□□□ -0.65
CLDN6-201ENST00000328796 CDK2AP2O75956 126 aa11□□□□□ -0.65
CLDN6-201ENST00000328796 FOXI1Q12951 378 aa11□□□□□ -0.65
CLDN6-201ENST00000328796 C2orf66Q6UXQ4 117 aa11□□□□□ -0.65
CLDN6-201ENST00000328796 PRSS3P2Q8NHM4 247 aa11□□□□□ -0.65
CLDN6-201ENST00000328796 OPRPNQ99935 248 aaPredicted RBP11□□□□□ -0.65
CLDN6-201ENST00000328796 XCL1P47992 114 aa10.99□□□□□ -0.65
CLDN6-201ENST00000328796 LINC00310P59036 64 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms