RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 WFDC9Q8NEX5 89 aa8.39□□□□□ -1.07
COL4A5-201ENST00000328300 NDUFB1O75438 58 aa8.39□□□□□ -1.07
COL4A5-201ENST00000328300 HIST2H2BDQ6DRA6 164 aa8.39□□□□□ -1.07
COL4A5-201ENST00000328300 CD164L2Q6UWJ8 174 aa8.39□□□□□ -1.07
COL4A5-201ENST00000328300 Q6ZS46 218 aa8.39□□□□□ -1.07
COL4A5-201ENST00000328300 BDP1A6H8Y1 2624 aa8.39□□□□□ -1.07
COL4A5-201ENST00000328300 TSHBP01222 138 aa8.38□□□□□ -1.07
COL4A5-201ENST00000328300 P0DMU3 169 aa8.38□□□□□ -1.07
COL4A5-201ENST00000328300 FAM231AP0DMU4 169 aa8.38□□□□□ -1.07
COL4A5-201ENST00000328300 FAM231CP0DMU5 169 aa8.38□□□□□ -1.07
COL4A5-201ENST00000328300 LINC00482Q8N8I6 264 aa8.38□□□□□ -1.07
COL4A5-201ENST00000328300 PIEZO1Q92508 2521 aa8.38□□□□□ -1.07
COL4A5-201ENST00000328300 LECT2O14960 151 aa8.38□□□□□ -1.07
COL4A5-201ENST00000328300 MP68P56378 58 aa8.38□□□□□ -1.07
COL4A5-201ENST00000328300 NREPQ16612 68 aa8.38□□□□□ -1.07
COL4A5-201ENST00000328300 NCR3O14931 201 aa8.38□□□□□ -1.07
COL4A5-201ENST00000328300 ODF3L2Q3SX64 289 aa8.37□□□□□ -1.07
COL4A5-201ENST00000328300 UBE2D3P61077 147 aa8.37□□□□□ -1.07
COL4A5-201ENST00000328300 UBE2D2P62837 147 aa8.37□□□□□ -1.07
COL4A5-201ENST00000328300 PRR9Q5T870 116 aa8.37□□□□□ -1.07
COL4A5-201ENST00000328300 LINC00643Q86TS7 51 aa8.37□□□□□ -1.07
COL4A5-201ENST00000328300 TCL1BO95988 128 aa8.37□□□□□ -1.07
COL4A5-201ENST00000328300 TNRC6BQ9UPQ9 1833 aaKnown RBP8.36□□□□□ -1.07
COL4A5-201ENST00000328300 C11orf21Q9P2W6 132 aa8.36□□□□□ -1.07
COL4A5-201ENST00000328300 TP73-AS1Q9UF72 201 aa8.36□□□□□ -1.07
COL4A5-201ENST00000328300 F8WDY8 70 aa8.36□□□□□ -1.07
COL4A5-201ENST00000328300 C18orf65Q6ZTR6 163 aa8.36□□□□□ -1.07
COL4A5-201ENST00000328300 CDKN2A-AS1Q9UH64 79 aa8.36□□□□□ -1.07
COL4A5-201ENST00000328300 CEMP1Q6PRD7 247 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-201ENST00000328300 PRB2P02812 416 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-201ENST00000328300 COX17Q14061 63 aa8.36□□□□□ -1.07
COL4A5-201ENST00000328300 NDUFV3P56181 108 aaKnown RBP8.35□□□□□ -1.07
COL4A5-201ENST00000328300 RBX1P62877 108 aa8.35□□□□□ -1.07
COL4A5-201ENST00000328300 BBC3Q96PG8 261 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-201ENST00000328300 MT-ATP8P03928 68 aa8.35□□□□□ -1.07
COL4A5-201ENST00000328300 UBE2D4Q9Y2X8 147 aa8.35□□□□□ -1.07
COL4A5-201ENST00000328300 SYCNQ0VAF6 134 aa8.35□□□□□ -1.07
COL4A5-201ENST00000328300 KPRPQ5T749 579 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-201ENST00000328300 NUPR2A6NF83 97 aa8.34□□□□□ -1.07
COL4A5-201ENST00000328300 IGHV4-30-4P0DP06 118 aa8.34□□□□□ -1.07
COL4A5-201ENST00000328300 NOTCH3Q9UM47 2321 aa8.34□□□□□ -1.07
COL4A5-201ENST00000328300 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
COL4A5-201ENST00000328300 MED13LQ71F56 2210 aa8.33□□□□□ -1.08
COL4A5-201ENST00000328300 EML5Q05BV3 1969 aa8.33□□□□□ -1.08
COL4A5-201ENST00000328300 CHKB-CPT1BH3BT56 60 aa8.33□□□□□ -1.08
COL4A5-201ENST00000328300 LINC00308Q8TCZ7 52 aa8.33□□□□□ -1.08
COL4A5-201ENST00000328300 BRK1Q8WUW1 75 aa8.32□□□□□ -1.08
COL4A5-201ENST00000328300 BEAN1Q3B7T3 259 aa8.32□□□□□ -1.08
COL4A5-201ENST00000328300 IGLV4-69A0A075B6H9 119 aa8.32□□□□□ -1.08
COL4A5-201ENST00000328300 C14orf132Q9NPU4 83 aa8.32□□□□□ -1.08
COL4A5-201ENST00000328300 LINC00474Q9P2X8 69 aa8.32□□□□□ -1.08
COL4A5-201ENST00000328300 UQCRQO14949 82 aa8.31□□□□□ -1.08
COL4A5-201ENST00000328300 HIGD2BQ4VC39 106 aa8.31□□□□□ -1.08
COL4A5-201ENST00000328300 Q8IZM0 81 aa8.31□□□□□ -1.08
COL4A5-201ENST00000328300 LINC00959A0A1B0GUT2 108 aa8.31□□□□□ -1.08
COL4A5-201ENST00000328300 CSDC2Q9Y534 153 aaKnown RBP8.31□□□□□ -1.08
COL4A5-201ENST00000328300 UBE2D1P51668 147 aa8.3□□□□□ -1.08
COL4A5-201ENST00000328300 TRBV30A0A0K0K1B3 111 aa8.3□□□□□ -1.08
COL4A5-201ENST00000328300 TEX49A0A1B0GTD5 131 aa8.29□□□□□ -1.08
COL4A5-201ENST00000328300 ZNF706Q9Y5V0 76 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-201ENST00000328300 LOC107984640A0A0U1RRK4 108 aa8.29□□□□□ -1.08
COL4A5-201ENST00000328300 PROK1P58294 105 aa8.29□□□□□ -1.08
COL4A5-201ENST00000328300 LINC01561Q8N1V8 128 aa8.29□□□□□ -1.08
COL4A5-201ENST00000328300 CACNA1AO00555 2505 aa8.29□□□□□ -1.08
COL4A5-201ENST00000328300 TRAV23DV6A0A075B6W5 121 aa8.29□□□□□ -1.08
COL4A5-201ENST00000328300 NAV2Q8IVL1 2488 aa8.29□□□□□ -1.08
COL4A5-201ENST00000328300 KLK9Q2XQG4 91 aa8.29□□□□□ -1.08
COL4A5-201ENST00000328300 Q8N976 141 aa8.29□□□□□ -1.08
COL4A5-201ENST00000328300 M0R378 163 aa8.28□□□□□ -1.08
COL4A5-201ENST00000328300 CDC42SE2Q9NRR3 84 aa8.28□□□□□ -1.08
COL4A5-201ENST00000328300 UPK3BQ9BT76 320 aa8.28□□□□□ -1.08
COL4A5-201ENST00000328300 ATP5EP2Q5VTU8 51 aa8.28□□□□□ -1.08
COL4A5-201ENST00000328300 DHRS4-AS1Q9P1J3 65 aa8.28□□□□□ -1.08
COL4A5-201ENST00000328300 KIAA1549Q9HCM3 1950 aa8.28□□□□□ -1.08
COL4A5-201ENST00000328300 C7orf33Q8WU49 177 aa8.28□□□□□ -1.08
COL4A5-201ENST00000328300 NAV3Q8IVL0 2385 aa8.27□□□□□ -1.09
COL4A5-201ENST00000328300 IGKV2D-26A0A0A0MRZ7 120 aa8.27□□□□□ -1.09
COL4A5-201ENST00000328300 NHLRC4P0CG21 123 aaPredicted RBP8.27□□□□□ -1.09
COL4A5-201ENST00000328300 WFDC10AQ9H1F0 79 aa8.27□□□□□ -1.09
COL4A5-201ENST00000328300 IGIPA6NJ69 53 aa8.27□□□□□ -1.09
COL4A5-201ENST00000328300 C3orf22Q8N5N4 141 aa8.27□□□□□ -1.09
COL4A5-201ENST00000328300 C1orf158Q8N1D5 194 aa8.26□□□□□ -1.09
COL4A5-201ENST00000328300 C20orf197Q8N268 126 aa8.26□□□□□ -1.09
COL4A5-201ENST00000328300 SVIPQ8NHG7 77 aa8.26□□□□□ -1.09
COL4A5-201ENST00000328300 SDIM1Q6ZPB5 146 aa8.26□□□□□ -1.09
COL4A5-201ENST00000328300 NCOR2Q9Y618 2525 aa8.25□□□□□ -1.09
COL4A5-201ENST00000328300 FAM236DA0A1B0GTK5 79 aa8.25□□□□□ -1.09
COL4A5-201ENST00000328300 FAM236CP0DP71 79 aa8.25□□□□□ -1.09
COL4A5-201ENST00000328300 SMR3AQ99954 134 aa8.25□□□□□ -1.09
COL4A5-201ENST00000328300 ATRXP46100 2492 aa8.25□□□□□ -1.09
COL4A5-201ENST00000328300 A0A0J9YWU9 116 aa8.25□□□□□ -1.09
COL4A5-201ENST00000328300 IGKV2-24A0A0C4DH68 120 aa8.24□□□□□ -1.09
COL4A5-201ENST00000328300 OXLD1Q5BKU9 147 aa8.24□□□□□ -1.09
COL4A5-201ENST00000328300 EGFEM1PQ0D2K5 195 aa8.24□□□□□ -1.09
COL4A5-201ENST00000328300 A0A1B0GUV1 79 aa8.23□□□□□ -1.09
COL4A5-201ENST00000328300 FAM19A1Q7Z5A9 133 aa8.23□□□□□ -1.09
COL4A5-201ENST00000328300 MAPKAPK5-AS1Q8N8E1 139 aa8.23□□□□□ -1.09
COL4A5-201ENST00000328300 SPG11Q96JI7 2443 aa8.23□□□□□ -1.09
COL4A5-201ENST00000328300 NACAE9PAV3 2078 aa8.23□□□□□ -1.09
COL4A5-201ENST00000328300 FHL2Q14192 279 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms