RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 TINCRA0A1B0GVN0 87 aa13.3□□□□□ -0.28
TRAPPC12-201ENST00000324266 M0QY20 66 aa13.3□□□□□ -0.28
TRAPPC12-201ENST00000324266 CFHR3Q02985 330 aa13.3□□□□□ -0.28
TRAPPC12-201ENST00000324266 SPINK13Q1W4C9 94 aa13.3□□□□□ -0.28
TRAPPC12-201ENST00000324266 C9orf85Q96MD7 179 aa13.3□□□□□ -0.28
TRAPPC12-201ENST00000324266 C1orf43Q9BWL3 253 aa13.3□□□□□ -0.28
TRAPPC12-201ENST00000324266 CCL19Q99731 98 aa13.29□□□□□ -0.28
TRAPPC12-201ENST00000324266 FBN2P35556 2912 aa13.28□□□□□ -0.28
TRAPPC12-201ENST00000324266 TRBV6-5A0A0K0K1A5 114 aa13.28□□□□□ -0.28
TRAPPC12-201ENST00000324266 K7EMT4 169 aa13.28□□□□□ -0.28
TRAPPC12-201ENST00000324266 UPK3BQ9BT76 320 aa13.28□□□□□ -0.28
TRAPPC12-201ENST00000324266 A0A0J9YX75 114 aa13.27□□□□□ -0.29
TRAPPC12-201ENST00000324266 TRAV8-3A0A0A6YYJ7 113 aa13.27□□□□□ -0.29
TRAPPC12-201ENST00000324266 ZNF580Q9UK33 172 aa13.27□□□□□ -0.29
TRAPPC12-201ENST00000324266 MSMBP08118 114 aa13.26□□□□□ -0.29
TRAPPC12-201ENST00000324266 PLA2G2AP14555 144 aa13.26□□□□□ -0.29
TRAPPC12-201ENST00000324266 RHOHQ15669 191 aa13.26□□□□□ -0.29
TRAPPC12-201ENST00000324266 NSUN5P1Q3KNT7 163 aa13.26□□□□□ -0.29
TRAPPC12-201ENST00000324266 PSMB8P28062 276 aa13.25□□□□□ -0.29
TRAPPC12-201ENST00000324266 RPL18AQ02543 176 aaKnown RBP13.25□□□□□ -0.29
TRAPPC12-201ENST00000324266 PEMTQ9UBM1 199 aa13.25□□□□□ -0.29
TRAPPC12-201ENST00000324266 NBPF19A0A087WUL8 3843 aa13.25□□□□□ -0.29
TRAPPC12-201ENST00000324266 IGHV1OR15-1A0A075B7D0 117 aa13.24□□□□□ -0.29
TRAPPC12-201ENST00000324266 LEPROTO15243 131 aa13.24□□□□□ -0.29
TRAPPC12-201ENST00000324266 POLQO75417 2590 aa13.24□□□□□ -0.29
TRAPPC12-201ENST00000324266 A0A0J9YXV3 536 aa13.24□□□□□ -0.29
TRAPPC12-201ENST00000324266 IGHV4-59P01825 116 aa13.24□□□□□ -0.29
TRAPPC12-201ENST00000324266 RPL35AP18077 110 aaKnown RBP13.24□□□□□ -0.29
TRAPPC12-201ENST00000324266 PFN2P35080 140 aa13.24□□□□□ -0.29
TRAPPC12-201ENST00000324266 LINC00336Q6ZUF6 198 aa13.24□□□□□ -0.29
TRAPPC12-201ENST00000324266 SEC61GP60059 68 aa13.23□□□□□ -0.29
TRAPPC12-201ENST00000324266 SNRPD3P62318 126 aaKnown RBP13.23□□□□□ -0.29
TRAPPC12-201ENST00000324266 SERP2Q8N6R1 65 aa13.23□□□□□ -0.29
TRAPPC12-201ENST00000324266 PTPN13Q12923 2485 aa13.23□□□□□ -0.29
TRAPPC12-201ENST00000324266 IGHV3-73A0A0B4J1V6 119 aa13.23□□□□□ -0.29
TRAPPC12-201ENST00000324266 HTN1P15515 57 aa13.23□□□□□ -0.29
TRAPPC12-201ENST00000324266 C20orf203Q8NBC4 194 aa13.23□□□□□ -0.29
TRAPPC12-201ENST00000324266 SYNJ2BPP57105 145 aa13.22□□□□□ -0.29
TRAPPC12-201ENST00000324266 ABCA12Q86UK0 2595 aa13.22□□□□□ -0.29
TRAPPC12-201ENST00000324266 ZANQ9Y493 2812 aa13.22□□□□□ -0.29
TRAPPC12-201ENST00000324266 I3L3M4 83 aa13.22□□□□□ -0.29
TRAPPC12-201ENST00000324266 J3QKU1 62 aa13.22□□□□□ -0.29
TRAPPC12-201ENST00000324266 K7EQG2 157 aa13.22□□□□□ -0.29
TRAPPC12-201ENST00000324266 TIMM21Q9BVV7 248 aa13.22□□□□□ -0.29
TRAPPC12-201ENST00000324266 ADARB2-AS1A8MUL3 147 aa13.21□□□□□ -0.29
TRAPPC12-201ENST00000324266 PKIGQ9Y2B9 76 aa13.21□□□□□ -0.29
TRAPPC12-201ENST00000324266 GCN1Q92616 2671 aaKnown RBP13.21□□□□□ -0.3
TRAPPC12-201ENST00000324266 IGLV4-3A0A075B6K6 122 aa13.2□□□□□ -0.3
TRAPPC12-201ENST00000324266 PROK1P58294 105 aa13.2□□□□□ -0.3
TRAPPC12-201ENST00000324266 PRM2P04554 102 aa13.2□□□□□ -0.3
TRAPPC12-201ENST00000324266 DEFB112Q30KQ8 113 aa13.2□□□□□ -0.3
TRAPPC12-201ENST00000324266 A0A0J9YXY3 114 aa13.19□□□□□ -0.3
TRAPPC12-201ENST00000324266 RNASE13Q5GAN3 156 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-201ENST00000324266 Q6ZSV7 163 aa13.19□□□□□ -0.3
TRAPPC12-201ENST00000324266 RBMY1A1P0DJD3 496 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-201ENST00000324266 RBMY1CP0DJD4 496 aa13.18□□□□□ -0.3
TRAPPC12-201ENST00000324266 RBMY1FQ15415 496 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-201ENST00000324266 TMEM86BQ8N661 226 aa13.17□□□□□ -0.3
TRAPPC12-201ENST00000324266 PRRC2AP48634 2157 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-201ENST00000324266 RS1O15537 224 aa13.17□□□□□ -0.3
TRAPPC12-201ENST00000324266 Q9UF83 564 aa13.17□□□□□ -0.3
TRAPPC12-201ENST00000324266 KNCNA6PVL3 124 aa13.16□□□□□ -0.3
TRAPPC12-201ENST00000324266 B4DSR2 109 aa13.15□□□□□ -0.3
TRAPPC12-201ENST00000324266 PRSS2P07478 247 aa13.15□□□□□ -0.3
TRAPPC12-201ENST00000324266 FAM104AQ969W3 186 aa13.15□□□□□ -0.3
TRAPPC12-201ENST00000324266 LITAFQ99732 161 aa13.15□□□□□ -0.3
TRAPPC12-201ENST00000324266 CD28P10747 220 aa13.15□□□□□ -0.3
TRAPPC12-201ENST00000324266 ZNF415Q09FC8 603 aa13.15□□□□□ -0.3
TRAPPC12-201ENST00000324266 HIST2H2BCQ6DN03 193 aa13.15□□□□□ -0.3
TRAPPC12-201ENST00000324266 APCP25054 2843 aa13.15□□□□□ -0.31
TRAPPC12-201ENST00000324266 IGHV3-30-3P0DP02 117 aa13.14□□□□□ -0.31
TRAPPC12-201ENST00000324266 KRTAP10-9P60411 292 aa13.14□□□□□ -0.31
TRAPPC12-201ENST00000324266 DAND5Q8N907 189 aa13.14□□□□□ -0.31
TRAPPC12-201ENST00000324266 DAZ2Q13117 558 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-201ENST00000324266 DAZ4Q86SG3 579 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-201ENST00000324266 MAPK1IP1LQ8NDC0 245 aa13.14□□□□□ -0.31
TRAPPC12-201ENST00000324266 DAZ3Q9NR90 486 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-201ENST00000324266 ANKRD17O75179 2603 aaKnown RBP13.14□□□□□ -0.31
TRAPPC12-201ENST00000324266 HOXD3P31249 432 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC12-201ENST00000324266 FASNP49327 2511 aaKnown RBP13.13□□□□□ -0.31
TRAPPC12-201ENST00000324266 A8MZ25 164 aa13.12□□□□□ -0.31
TRAPPC12-201ENST00000324266 V9GYY9 64 aa13.12□□□□□ -0.31
TRAPPC12-201ENST00000324266 TIRAPP58753 221 aa13.12□□□□□ -0.31
TRAPPC12-201ENST00000324266 NACAE9PAV3 2078 aa13.12□□□□□ -0.31
TRAPPC12-201ENST00000324266 TMEM61Q8N0U2 210 aa13.11□□□□□ -0.31
TRAPPC12-201ENST00000324266 MXRA5Q9NR99 2828 aa13.11□□□□□ -0.31
TRAPPC12-201ENST00000324266 NAV2Q8IVL1 2488 aa13.11□□□□□ -0.31
TRAPPC12-201ENST00000324266 NPC2P61916 151 aa13.11□□□□□ -0.31
TRAPPC12-201ENST00000324266 NDUFC2-KCTD14E9PQ53 114 aa13.1□□□□□ -0.31
TRAPPC12-201ENST00000324266 FHL2Q14192 279 aa13.1□□□□□ -0.31
TRAPPC12-201ENST00000324266 Q6ZSN1 163 aa13.1□□□□□ -0.31
TRAPPC12-201ENST00000324266 CUBNO60494 3623 aa13.1□□□□□ -0.31
TRAPPC12-201ENST00000324266 DEFB131AP59861 70 aa13.1□□□□□ -0.31
TRAPPC12-201ENST00000324266 DEFB136Q30KP8 78 aa13.1□□□□□ -0.31
TRAPPC12-201ENST00000324266 ADAMTSL4-AS1Q5T5F5 129 aa13.1□□□□□ -0.31
TRAPPC12-201ENST00000324266 C18orf65Q6ZTR6 163 aa13.09□□□□□ -0.31
TRAPPC12-201ENST00000324266 MRPS36P82909 103 aaKnown RBP13.08□□□□□ -0.32
TRAPPC12-201ENST00000324266 MIAQ16674 131 aa13.08□□□□□ -0.32
TRAPPC12-201ENST00000324266 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-201ENST00000324266 FAM236DA0A1B0GTK5 79 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms