RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 TMEM243Q9BU79 118 aa9.95□□□□□ -0.82
SRRM1-201ENST00000323848 NBPF19A0A087WUL8 3843 aa9.95□□□□□ -0.82
SRRM1-201ENST00000323848 C6orf226Q5I0X4 101 aa9.94□□□□□ -0.82
SRRM1-201ENST00000323848 VPS13CQ709C8 3753 aa9.94□□□□□ -0.82
SRRM1-201ENST00000323848 MALP21145 153 aa9.94□□□□□ -0.82
SRRM1-201ENST00000323848 TRBV7-3A0A075B6L6 115 aa9.94□□□□□ -0.82
SRRM1-201ENST00000323848 INSL3P51460 131 aa9.94□□□□□ -0.82
SRRM1-201ENST00000323848 ERG28Q9UKR5 140 aa9.94□□□□□ -0.82
SRRM1-201ENST00000323848 OXLD1Q5BKU9 147 aa9.93□□□□□ -0.82
SRRM1-201ENST00000323848 SLC25A29Q8N8R3 303 aa9.93□□□□□ -0.82
SRRM1-201ENST00000323848 NEXN-AS1Q8NBZ9 246 aa9.93□□□□□ -0.82
SRRM1-201ENST00000323848 PAX4O43316 350 aa9.93□□□□□ -0.82
SRRM1-201ENST00000323848 SNCGO76070 127 aa9.93□□□□□ -0.82
SRRM1-201ENST00000323848 COX6CP09669 75 aa9.93□□□□□ -0.82
SRRM1-201ENST00000323848 SMIM20Q8N5G0 67 aa9.93□□□□□ -0.82
SRRM1-201ENST00000323848 A0A096LNT2 108 aa9.92□□□□□ -0.82
SRRM1-201ENST00000323848 ANGP03950 147 aaKnown RBP9.92□□□□□ -0.82
SRRM1-201ENST00000323848 Q9H8V8 135 aa9.92□□□□□ -0.82
SRRM1-201ENST00000323848 HILS1P60008 231 aa9.92□□□□□ -0.82
SRRM1-201ENST00000323848 HHLA3Q9XRX5 114 aa9.92□□□□□ -0.82
SRRM1-201ENST00000323848 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.92□□□□□ -0.82
SRRM1-201ENST00000323848 TENM4Q6N022 2769 aa9.92□□□□□ -0.82
SRRM1-201ENST00000323848 K7EQD1 137 aa9.91□□□□□ -0.82
SRRM1-201ENST00000323848 LYRM7Q5U5X0 104 aa9.91□□□□□ -0.82
SRRM1-201ENST00000323848 POLR2KP53803 58 aaKnown RBP9.91□□□□□ -0.82
SRRM1-201ENST00000323848 TRBV7-9A0A0J9YWB2 115 aa9.91□□□□□ -0.82
SRRM1-201ENST00000323848 TMEM86BQ8N661 226 aa9.91□□□□□ -0.82
SRRM1-201ENST00000323848 SVIPQ8NHG7 77 aa9.91□□□□□ -0.82
SRRM1-201ENST00000323848 CDKN2A-AS1Q9UH64 79 aa9.91□□□□□ -0.82
SRRM1-201ENST00000323848 A4D1N5 150 aa9.91□□□□□ -0.82
SRRM1-201ENST00000323848 C9orf85Q96MD7 179 aa9.91□□□□□ -0.82
SRRM1-201ENST00000323848 MED14OSP0DP75 135 aa9.9□□□□□ -0.82
SRRM1-201ENST00000323848 CMC4P56277 68 aaPredicted RBP9.9□□□□□ -0.82
SRRM1-201ENST00000323848 RHOHQ15669 191 aa9.9□□□□□ -0.82
SRRM1-201ENST00000323848 C1orf158Q8N1D5 194 aa9.9□□□□□ -0.82
SRRM1-201ENST00000323848 IGLV4-3A0A075B6K6 122 aa9.9□□□□□ -0.83
SRRM1-201ENST00000323848 TSHBP01222 138 aa9.9□□□□□ -0.83
SRRM1-201ENST00000323848 FAM222AQ5U5X8 452 aa9.9□□□□□ -0.83
SRRM1-201ENST00000323848 MUSTN1Q8IVN3 82 aa9.9□□□□□ -0.83
SRRM1-201ENST00000323848 TMEM263Q8WUH6 116 aaKnown RBP9.9□□□□□ -0.83
SRRM1-201ENST00000323848 COX8CQ7Z4L0 72 aa9.89□□□□□ -0.83
SRRM1-201ENST00000323848 IGLV2-18A0A075B6J9 118 aa9.89□□□□□ -0.83
SRRM1-201ENST00000323848 C9JAW5 83 aa9.89□□□□□ -0.83
SRRM1-201ENST00000323848 IGHV3-30-3P0DP02 117 aa9.88□□□□□ -0.83
SRRM1-201ENST00000323848 ZFHX3Q15911 3703 aa9.88□□□□□ -0.83
SRRM1-201ENST00000323848 IGHV4-4A0A075B6R2 117 aa9.88□□□□□ -0.83
SRRM1-201ENST00000323848 E9PLD3 99 aa9.88□□□□□ -0.83
SRRM1-201ENST00000323848 GAGE2BQ13066 116 aa9.87□□□□□ -0.83
SRRM1-201ENST00000323848 GAGE2EQ4V326 116 aa9.87□□□□□ -0.83
SRRM1-201ENST00000323848 ZFAND6Q6FIF0 208 aa9.87□□□□□ -0.83
SRRM1-201ENST00000323848 GAGE2DQ9UEU5 116 aa9.87□□□□□ -0.83
SRRM1-201ENST00000323848 TRBV27A0A0K0K1C4 114 aa9.87□□□□□ -0.83
SRRM1-201ENST00000323848 HERV-K104P63124 156 aa9.87□□□□□ -0.83
SRRM1-201ENST00000323848 RNF183Q96D59 192 aa9.87□□□□□ -0.83
SRRM1-201ENST00000323848 C16orf74Q96GX8 76 aa9.87□□□□□ -0.83
SRRM1-201ENST00000323848 TIMM17AQ99595 171 aa9.87□□□□□ -0.83
SRRM1-201ENST00000323848 CR1P17927 2039 aa9.87□□□□□ -0.83
SRRM1-201ENST00000323848 IGLL5B9A064 214 aa9.86□□□□□ -0.83
SRRM1-201ENST00000323848 RPL13AP40429 203 aaKnown RBP9.86□□□□□ -0.83
SRRM1-201ENST00000323848 VSIG2Q96IQ7 327 aa9.86□□□□□ -0.83
SRRM1-201ENST00000323848 TRAV12-1A0A0B4J245 112 aa9.86□□□□□ -0.83
SRRM1-201ENST00000323848 IGHV3-30P01768 117 aa9.86□□□□□ -0.83
SRRM1-201ENST00000323848 IGHV3-33P01772 117 aa9.86□□□□□ -0.83
SRRM1-201ENST00000323848 MT-ATP8P03928 68 aa9.86□□□□□ -0.83
SRRM1-201ENST00000323848 IGHV3-30-5P0DP03 117 aa9.86□□□□□ -0.83
SRRM1-201ENST00000323848 ATP6V0E2Q8NHE4 81 aa9.86□□□□□ -0.83
SRRM1-201ENST00000323848 TRAV25A0A0B4J276 109 aa9.85□□□□□ -0.83
SRRM1-201ENST00000323848 C9orf66Q5T8R8 295 aa9.85□□□□□ -0.83
SRRM1-201ENST00000323848 LINC00526Q96FQ7 95 aa9.85□□□□□ -0.83
SRRM1-201ENST00000323848 LINC00694P0DN24 101 aa9.85□□□□□ -0.83
SRRM1-201ENST00000323848 ZNF22P17026 224 aaPredicted RBP9.85□□□□□ -0.83
SRRM1-201ENST00000323848 RS1O15537 224 aa9.85□□□□□ -0.83
SRRM1-201ENST00000323848 ODF3Q96PU9 254 aa9.85□□□□□ -0.83
SRRM1-201ENST00000323848 LINC00315P59091 139 aa9.84□□□□□ -0.83
SRRM1-201ENST00000323848 Q9HAA7 133 aa9.84□□□□□ -0.83
SRRM1-201ENST00000323848 PRO1854Q9UHT4 67 aa9.84□□□□□ -0.83
SRRM1-201ENST00000323848 KIF25-AS1Q9Y6Z4 181 aa9.84□□□□□ -0.83
SRRM1-201ENST00000323848 SIVA1O15304 175 aa9.84□□□□□ -0.83
SRRM1-201ENST00000323848 ZNF575Q86XF7 245 aa9.84□□□□□ -0.83
SRRM1-201ENST00000323848 CRPP02741 224 aa9.83□□□□□ -0.84
SRRM1-201ENST00000323848 MORN3Q6PF18 240 aaPredicted RBP9.83□□□□□ -0.84
SRRM1-201ENST00000323848 IGIPA6NJ69 53 aa9.83□□□□□ -0.84
SRRM1-201ENST00000323848 TSPAN13O95857 204 aa9.83□□□□□ -0.84
SRRM1-201ENST00000323848 TSPEAR-AS2P59090 65 aa9.83□□□□□ -0.84
SRRM1-201ENST00000323848 KRTAP1-3Q8IUG1 177 aa9.83□□□□□ -0.84
SRRM1-201ENST00000323848 UBE2WQ96B02 151 aa9.83□□□□□ -0.84
SRRM1-201ENST00000323848 APOC4P55056 127 aa9.82□□□□□ -0.84
SRRM1-201ENST00000323848 RETNQ9HD89 108 aa9.82□□□□□ -0.84
SRRM1-201ENST00000323848 FSHBP01225 129 aa9.81□□□□□ -0.84
SRRM1-201ENST00000323848 SS18Q15532 418 aa9.81□□□□□ -0.84
SRRM1-201ENST00000323848 SPANXA1Q9NS26 97 aa9.81□□□□□ -0.84
SRRM1-201ENST00000323848 LEPROTO15243 131 aa9.81□□□□□ -0.84
SRRM1-201ENST00000323848 DNAL4O96015 105 aa9.81□□□□□ -0.84
SRRM1-201ENST00000323848 NDUFA11Q86Y39 141 aa9.81□□□□□ -0.84
SRRM1-201ENST00000323848 KLK12Q9UKR0 248 aa9.8□□□□□ -0.84
SRRM1-201ENST00000323848 F8W1H4 67 aa9.8□□□□□ -0.84
SRRM1-201ENST00000323848 IGLV1-51P01701 117 aa9.8□□□□□ -0.84
SRRM1-201ENST00000323848 HERVK_113P63121 156 aa9.8□□□□□ -0.84
SRRM1-201ENST00000323848 NFE4Q86UQ8 179 aa9.8□□□□□ -0.84
SRRM1-201ENST00000323848 POM121L12Q8N7R1 296 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms