RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 A0A0J9YXY3 114 aa11.34□□□□□ -0.59
SMARCD2-202ENST00000323347 TIRAPP58753 221 aa11.34□□□□□ -0.59
SMARCD2-202ENST00000323347 WFDC2Q14508 124 aa11.34□□□□□ -0.59
SMARCD2-202ENST00000323347 C19orf73Q9NVV2 129 aa11.34□□□□□ -0.59
SMARCD2-202ENST00000323347 DNHD1Q96M86 4753 aa11.33□□□□□ -0.6
SMARCD2-202ENST00000323347 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.33□□□□□ -0.6
SMARCD2-202ENST00000323347 IGKV2-29A2NJV5 120 aaPredicted RBP11.33□□□□□ -0.6
SMARCD2-202ENST00000323347 ADARB2-AS1A8MUL3 147 aa11.33□□□□□ -0.6
SMARCD2-202ENST00000323347 APOMO95445 188 aa11.33□□□□□ -0.6
SMARCD2-202ENST00000323347 LYRM7Q5U5X0 104 aa11.33□□□□□ -0.6
SMARCD2-202ENST00000323347 FAM19A3Q7Z5A8 133 aa11.33□□□□□ -0.6
SMARCD2-202ENST00000323347 HILS1P60008 231 aa11.33□□□□□ -0.6
SMARCD2-202ENST00000323347 Q6ZUT4 128 aa11.33□□□□□ -0.6
SMARCD2-202ENST00000323347 VSIG2Q96IQ7 327 aa11.33□□□□□ -0.6
SMARCD2-202ENST00000323347 LITAFQ99732 161 aa11.33□□□□□ -0.6
SMARCD2-202ENST00000323347 PRO1854Q9UHT4 67 aa11.33□□□□□ -0.6
SMARCD2-202ENST00000323347 CSDC2Q9Y534 153 aaKnown RBP11.33□□□□□ -0.6
SMARCD2-202ENST00000323347 TRGV1A0A0A0MS02 117 aa11.32□□□□□ -0.6
SMARCD2-202ENST00000323347 A0A0B4J2C4 111 aa11.32□□□□□ -0.6
SMARCD2-202ENST00000323347 IGHV3-38A0A0C4DH36 116 aa11.31□□□□□ -0.6
SMARCD2-202ENST00000323347 ATP6V0E2Q8NHE4 81 aa11.31□□□□□ -0.6
SMARCD2-202ENST00000323347 IGHV3-64A0A075B6Q5 118 aa11.31□□□□□ -0.6
SMARCD2-202ENST00000323347 A4D1N5 150 aa11.31□□□□□ -0.6
SMARCD2-202ENST00000323347 K7EQD1 137 aa11.31□□□□□ -0.6
SMARCD2-202ENST00000323347 DAZ4Q86SG3 579 aaKnown RBP11.31□□□□□ -0.6
SMARCD2-202ENST00000323347 DAZ3Q9NR90 486 aaKnown RBP11.31□□□□□ -0.6
SMARCD2-202ENST00000323347 ERG28Q9UKR5 140 aa11.31□□□□□ -0.6
SMARCD2-202ENST00000323347 TRBV20-1A0A075B6N2 111 aa11.3□□□□□ -0.6
SMARCD2-202ENST00000323347 IGHV3OR16-12A0A075B7B8 117 aa11.3□□□□□ -0.6
SMARCD2-202ENST00000323347 PLAC8L1A1L4L8 177 aa11.3□□□□□ -0.6
SMARCD2-202ENST00000323347 RPL36AP83881 106 aaKnown RBP11.3□□□□□ -0.6
SMARCD2-202ENST00000323347 ETDBQ3ZM63 59 aa11.3□□□□□ -0.6
SMARCD2-202ENST00000323347 Q6ZTI0 123 aa11.3□□□□□ -0.6
SMARCD2-202ENST00000323347 MUSTN1Q8IVN3 82 aa11.3□□□□□ -0.6
SMARCD2-202ENST00000323347 SBSPONQ8IVN8 264 aa11.3□□□□□ -0.6
SMARCD2-202ENST00000323347 RPL36ALQ969Q0 106 aaKnown RBP11.3□□□□□ -0.6
SMARCD2-202ENST00000323347 SPANXDQ9BXN6 97 aa11.3□□□□□ -0.6
SMARCD2-202ENST00000323347 SPANXCQ9NY87 97 aa11.3□□□□□ -0.6
SMARCD2-202ENST00000323347 ANK3Q12955 4377 aaKnown RBP11.3□□□□□ -0.6
SMARCD2-202ENST00000323347 TRAV8-3A0A0A6YYJ7 113 aa11.29□□□□□ -0.6
SMARCD2-202ENST00000323347 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
SMARCD2-202ENST00000323347 EIF4EBP3O60516 100 aaPredicted RBP11.29□□□□□ -0.6
SMARCD2-202ENST00000323347 RNASE13Q5GAN3 156 aaKnown RBP11.29□□□□□ -0.6
SMARCD2-202ENST00000323347 CSNK1G2-AS1Q8NCQ2 148 aa11.29□□□□□ -0.6
SMARCD2-202ENST00000323347 C16orf74Q96GX8 76 aa11.29□□□□□ -0.6
SMARCD2-202ENST00000323347 OVOL2Q9BRP0 275 aa11.29□□□□□ -0.6
SMARCD2-202ENST00000323347 IGHV3-33P01772 117 aa11.29□□□□□ -0.6
SMARCD2-202ENST00000323347 ZFAND6Q6FIF0 208 aa11.29□□□□□ -0.6
SMARCD2-202ENST00000323347 RNF183Q96D59 192 aa11.29□□□□□ -0.6
SMARCD2-202ENST00000323347 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
SMARCD2-202ENST00000323347 TIMM17BO60830 172 aa11.28□□□□□ -0.6
SMARCD2-202ENST00000323347 SPINK8P0C7L1 97 aa11.28□□□□□ -0.6
SMARCD2-202ENST00000323347 SH2D6Q7Z4S9 175 aa11.28□□□□□ -0.6
SMARCD2-202ENST00000323347 NDUFA12Q9UI09 145 aa11.28□□□□□ -0.6
SMARCD2-202ENST00000323347 NTM-AS1Q6ZSK4 140 aa11.27□□□□□ -0.6
SMARCD2-202ENST00000323347 LOC107984156A0A0G2JMH3 177 aa11.27□□□□□ -0.61
SMARCD2-202ENST00000323347 SMCPP49901 116 aaPredicted RBP11.27□□□□□ -0.61
SMARCD2-202ENST00000323347 ARL17AQ8IVW1 177 aa11.27□□□□□ -0.61
SMARCD2-202ENST00000323347 TLN2Q9Y4G6 2542 aa11.26□□□□□ -0.61
SMARCD2-202ENST00000323347 GAGE5Q13069 117 aa11.26□□□□□ -0.61
SMARCD2-202ENST00000323347 GAGE6Q13070 117 aa11.26□□□□□ -0.61
SMARCD2-202ENST00000323347 DGAT2L7PQ6IED9 249 aa11.26□□□□□ -0.61
SMARCD2-202ENST00000323347 IGLV5-39A0A0G2JS06 123 aa11.25□□□□□ -0.61
SMARCD2-202ENST00000323347 PSMB2P49721 201 aa11.25□□□□□ -0.61
SMARCD2-202ENST00000323347 HERVK_113P63121 156 aa11.25□□□□□ -0.61
SMARCD2-202ENST00000323347 NOP10Q9NPE3 64 aaKnown RBP11.25□□□□□ -0.61
SMARCD2-202ENST00000323347 CDKN2A-AS1Q9UH64 79 aa11.25□□□□□ -0.61
SMARCD2-202ENST00000323347 TCL1BO95988 128 aa11.25□□□□□ -0.61
SMARCD2-202ENST00000323347 FOXI1Q12951 378 aa11.25□□□□□ -0.61
SMARCD2-202ENST00000323347 TRBV6-4A0A1B0GX49 114 aa11.24□□□□□ -0.61
SMARCD2-202ENST00000323347 NDUFA1O15239 70 aa11.24□□□□□ -0.61
SMARCD2-202ENST00000323347 LINC00694P0DN24 101 aa11.24□□□□□ -0.61
SMARCD2-202ENST00000323347 MIAQ16674 131 aa11.24□□□□□ -0.61
SMARCD2-202ENST00000323347 ADAMTSL4-AS1Q5T5F5 129 aa11.24□□□□□ -0.61
SMARCD2-202ENST00000323347 LINC00242Q5T6M2 205 aa11.24□□□□□ -0.61
SMARCD2-202ENST00000323347 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.24□□□□□ -0.61
SMARCD2-202ENST00000323347 CDIP1Q9H305 208 aa11.24□□□□□ -0.61
SMARCD2-202ENST00000323347 H7C423 109 aa11.23□□□□□ -0.61
SMARCD2-202ENST00000323347 TMEM101Q96IK0 257 aa11.23□□□□□ -0.61
SMARCD2-202ENST00000323347 COX6A2Q02221 97 aa11.23□□□□□ -0.61
SMARCD2-202ENST00000323347 WFDC10AQ9H1F0 79 aa11.23□□□□□ -0.61
SMARCD2-202ENST00000323347 CDC42SE2Q9NRR3 84 aa11.23□□□□□ -0.61
SMARCD2-202ENST00000323347 SS18L2Q9UHA2 77 aa11.23□□□□□ -0.61
SMARCD2-202ENST00000323347 SONP18583 2426 aaKnown RBP11.22□□□□□ -0.61
SMARCD2-202ENST00000323347 M0QXV9 152 aa11.22□□□□□ -0.61
SMARCD2-202ENST00000323347 IFITM1P13164 125 aa11.22□□□□□ -0.61
SMARCD2-202ENST00000323347 FLNAP21333 2647 aaKnown RBP11.22□□□□□ -0.61
SMARCD2-202ENST00000323347 NIPBLQ6KC79 2804 aaeCLIP11.22□□□□□ -0.61
SMARCD2-202ENST00000323347 RPL35AP18077 110 aaKnown RBP11.21□□□□□ -0.61
SMARCD2-202ENST00000323347 ANAPC13Q9BS18 74 aa11.21□□□□□ -0.61
SMARCD2-202ENST00000323347 GAGE12JA6NER3 117 aa11.21□□□□□ -0.62
SMARCD2-202ENST00000323347 A8MZ25 164 aa11.21□□□□□ -0.62
SMARCD2-202ENST00000323347 GAGE4Q13068 117 aa11.21□□□□□ -0.62
SMARCD2-202ENST00000323347 LINC01600Q96MT4 127 aa11.21□□□□□ -0.62
SMARCD2-202ENST00000323347 ACANP16112 2415 aa11.21□□□□□ -0.62
SMARCD2-202ENST00000323347 TRBV30A0A0K0K1B3 111 aa11.2□□□□□ -0.62
SMARCD2-202ENST00000323347 INSL3P51460 131 aa11.2□□□□□ -0.62
SMARCD2-202ENST00000323347 SFTA2Q6UW10 78 aa11.2□□□□□ -0.62
SMARCD2-202ENST00000323347 GAGE7O76087 117 aa11.19□□□□□ -0.62
SMARCD2-202ENST00000323347 GAGE12FP0CL80 117 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms