RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 TMEM263Q8WUH6 116 aaKnown RBP7.44□□□□□ -1.22
COL12A1-201ENST00000322507 K7EIM0 57 aa7.44□□□□□ -1.22
COL12A1-201ENST00000322507 FAM120AOSQ5T036 256 aa7.44□□□□□ -1.22
COL12A1-201ENST00000322507 C5orf24Q7Z6I8 188 aa7.44□□□□□ -1.22
COL12A1-201ENST00000322507 GYPEP15421 78 aa7.44□□□□□ -1.22
COL12A1-201ENST00000322507 RSPO1Q2MKA7 263 aaPredicted RBP7.43□□□□□ -1.22
COL12A1-201ENST00000322507 CRYGAP11844 174 aa7.43□□□□□ -1.22
COL12A1-201ENST00000322507 DEFB104AQ8WTQ1 72 aa7.43□□□□□ -1.22
COL12A1-201ENST00000322507 LY6HO94772 140 aa7.43□□□□□ -1.22
COL12A1-201ENST00000322507 IGHV7-81A0A0B4J1V7 117 aa7.43□□□□□ -1.22
COL12A1-201ENST00000322507 C1orf158Q8N1D5 194 aa7.43□□□□□ -1.22
COL12A1-201ENST00000322507 ZFAND3Q9H8U3 227 aa7.43□□□□□ -1.22
COL12A1-201ENST00000322507 FAM30AQ9NZY2 134 aa7.43□□□□□ -1.22
COL12A1-201ENST00000322507 KTN1-AS1Q86SY8 53 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 HHLA3Q9XRX5 114 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 EIF4EBP3O60516 100 aaPredicted RBP7.42□□□□□ -1.22
COL12A1-201ENST00000322507 CCKP06307 115 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 COX17Q14061 63 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 KLK5Q9Y337 293 aaPredicted RBP7.42□□□□□ -1.22
COL12A1-201ENST00000322507 C7orf65Q6ZTY9 151 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 BCE1O60756 84 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 TPSG1Q9NRR2 321 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 IGKV1-17P01599 117 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 PYGO1Q9Y3Y4 419 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 DAZAP2Q15038 168 aaPredicted RBP7.42□□□□□ -1.22
COL12A1-201ENST00000322507 LINC00208Q96KT6 92 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 C5orf56Q8N8D9 126 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 IGHV3-38A0A0C4DH36 116 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 CTSGP08311 255 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 JMJD1CQ15652 2540 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 HILS1P60008 231 aa7.42□□□□□ -1.22
COL12A1-201ENST00000322507 UFSP1Q6NVU6 142 aa7.41□□□□□ -1.22
COL12A1-201ENST00000322507 MUC7Q8TAX7 377 aa7.41□□□□□ -1.22
COL12A1-201ENST00000322507 IGHV4-30-2A0A087WSY4 118 aa7.41□□□□□ -1.22
COL12A1-201ENST00000322507 IGHV3-30-3P0DP02 117 aa7.41□□□□□ -1.22
COL12A1-201ENST00000322507 FBXL19-AS1Q494R0 122 aa7.41□□□□□ -1.22
COL12A1-201ENST00000322507 DHRS4-AS1Q9P1J3 65 aa7.41□□□□□ -1.22
COL12A1-201ENST00000322507 USP9YO00507 2555 aaPredicted RBP7.41□□□□□ -1.22
COL12A1-201ENST00000322507 IGHV4-38-2P0DP08 117 aa7.41□□□□□ -1.22
COL12A1-201ENST00000322507 DEFB113Q30KQ7 82 aa7.41□□□□□ -1.22
COL12A1-201ENST00000322507 C11orf53Q8IXP5 236 aa7.41□□□□□ -1.22
COL12A1-201ENST00000322507 C4orf26Q17RF5 130 aa7.41□□□□□ -1.22
COL12A1-201ENST00000322507 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.4□□□□□ -1.22
COL12A1-201ENST00000322507 IGKV2-29A2NJV5 120 aaPredicted RBP7.4□□□□□ -1.22
COL12A1-201ENST00000322507 MIR7-3HGQ8N6C7 128 aa7.4□□□□□ -1.22
COL12A1-201ENST00000322507 MYCNOSP40205 109 aa7.4□□□□□ -1.22
COL12A1-201ENST00000322507 PRSS33Q8NF86 280 aa7.4□□□□□ -1.22
COL12A1-201ENST00000322507 LINC00574Q9H8X3 128 aa7.4□□□□□ -1.22
COL12A1-201ENST00000322507 SPRY2O43597 315 aa7.4□□□□□ -1.22
COL12A1-201ENST00000322507 SPTBN4Q9H254 2564 aa7.4□□□□□ -1.22
COL12A1-201ENST00000322507 NFE4Q86UQ8 179 aa7.4□□□□□ -1.23
COL12A1-201ENST00000322507 ZNF462Q96JM2 2506 aa7.4□□□□□ -1.23
COL12A1-201ENST00000322507 IGHV3-33P01772 117 aa7.4□□□□□ -1.23
COL12A1-201ENST00000322507 ZNRD1Q9P1U0 126 aa7.4□□□□□ -1.23
COL12A1-201ENST00000322507 FAM167A-AS1Q96KT0 104 aa7.4□□□□□ -1.23
COL12A1-201ENST00000322507 C2orf70A6NJV1 201 aa7.39□□□□□ -1.23
COL12A1-201ENST00000322507 GNRH2O43555 120 aa7.39□□□□□ -1.23
COL12A1-201ENST00000322507 IGKV1OR2-108A0A075B7D4 117 aa7.39□□□□□ -1.23
COL12A1-201ENST00000322507 CYP4F30PQ9H0H9 118 aa7.39□□□□□ -1.23
COL12A1-201ENST00000322507 A0A1B0GXF2 115 aa7.38□□□□□ -1.23
COL12A1-201ENST00000322507 IBA57-AS1B1ANH7 110 aa7.38□□□□□ -1.23
COL12A1-201ENST00000322507 LINC00173Q6ZV60 143 aa7.38□□□□□ -1.23
COL12A1-201ENST00000322507 AJUBAQ96IF1 538 aa7.37□□□□□ -1.23
COL12A1-201ENST00000322507 COL4A4P53420 1690 aaPredicted RBP7.37□□□□□ -1.23
COL12A1-201ENST00000322507 Q6ZVQ6 151 aa7.37□□□□□ -1.23
COL12A1-201ENST00000322507 ZNF503-AS2A6NEH8 195 aa7.37□□□□□ -1.23
COL12A1-201ENST00000322507 RPL39LQ96EH5 51 aaKnown RBP7.37□□□□□ -1.23
COL12A1-201ENST00000322507 LCA10Q71F78 164 aa7.37□□□□□ -1.23
COL12A1-201ENST00000322507 LRCOL1A6NCL2 159 aa7.37□□□□□ -1.23
COL12A1-201ENST00000322507 ERC2-IT1O76042 136 aa7.37□□□□□ -1.23
COL12A1-201ENST00000322507 PRO0255Q9UI72 69 aa7.37□□□□□ -1.23
COL12A1-201ENST00000322507 A0A0J9YXV3 536 aa7.36□□□□□ -1.23
COL12A1-201ENST00000322507 NUPR1O60356 82 aa7.36□□□□□ -1.23
COL12A1-201ENST00000322507 IGHV4-61A0A0C4DH41 118 aa7.36□□□□□ -1.23
COL12A1-201ENST00000322507 CTSZQ9UBR2 303 aa7.36□□□□□ -1.23
COL12A1-201ENST00000322507 CLPSL2Q6UWE3 100 aa7.36□□□□□ -1.23
COL12A1-201ENST00000322507 IGLV1-47P01700 117 aa7.35□□□□□ -1.23
COL12A1-201ENST00000322507 IGHV3-30P01768 117 aa7.35□□□□□ -1.23
COL12A1-201ENST00000322507 IGHV3-30-5P0DP03 117 aa7.35□□□□□ -1.23
COL12A1-201ENST00000322507 C19orf71A6NCJ1 209 aa7.35□□□□□ -1.23
COL12A1-201ENST00000322507 TRBV6-5A0A0K0K1A5 114 aa7.35□□□□□ -1.23
COL12A1-201ENST00000322507 C20orf203Q8NBC4 194 aa7.35□□□□□ -1.23
COL12A1-201ENST00000322507 Q8N9W7 124 aa7.35□□□□□ -1.23
COL12A1-201ENST00000322507 WT1P19544 449 aaPredicted RBP7.34□□□□□ -1.23
COL12A1-201ENST00000322507 A0A1B0GU69 56 aa7.34□□□□□ -1.23
COL12A1-201ENST00000322507 A0A0J9YWU9 116 aa7.34□□□□□ -1.23
COL12A1-201ENST00000322507 ZNF73O43830 326 aaPredicted RBP7.34□□□□□ -1.23
COL12A1-201ENST00000322507 ARTNQ5T4W7 220 aa7.34□□□□□ -1.23
COL12A1-201ENST00000322507 A0A0J9YX75 114 aa7.34□□□□□ -1.24
COL12A1-201ENST00000322507 LINC00308Q8TCZ7 52 aa7.33□□□□□ -1.24
COL12A1-201ENST00000322507 Q6ZQT7 251 aa7.33□□□□□ -1.24
COL12A1-201ENST00000322507 SMAD5-AS1Q9Y6J3 95 aa7.33□□□□□ -1.24
COL12A1-201ENST00000322507 ACANP16112 2415 aa7.33□□□□□ -1.24
COL12A1-201ENST00000322507 C6orf99Q4VX62 202 aa7.33□□□□□ -1.24
COL12A1-201ENST00000322507 IGLV2-23P01705 113 aa7.33□□□□□ -1.24
COL12A1-201ENST00000322507 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.33□□□□□ -1.24
COL12A1-201ENST00000322507 ATP11AUNQ6ZP68 121 aa7.33□□□□□ -1.24
COL12A1-201ENST00000322507 C3orf84H3BNL1 204 aa7.33□□□□□ -1.24
COL12A1-201ENST00000322507 HCG22E2RYF7 251 aa7.32□□□□□ -1.24
COL12A1-201ENST00000322507 SLURP1P55000 103 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms