RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 DAZ2Q13117 558 aaKnown RBP12.96□□□□□ -0.33
PRKCB-202ENST00000321728 DAZ4Q86SG3 579 aaKnown RBP12.96□□□□□ -0.33
PRKCB-202ENST00000321728 PIMREGQ9BSJ6 248 aa12.96□□□□□ -0.33
PRKCB-202ENST00000321728 DAZ3Q9NR90 486 aaKnown RBP12.96□□□□□ -0.33
PRKCB-202ENST00000321728 HIST2H2BDQ6DRA6 164 aa12.96□□□□□ -0.34
PRKCB-202ENST00000321728 MXRA5Q9NR99 2828 aa12.95□□□□□ -0.34
PRKCB-202ENST00000321728 MYO9AB2RTY4 2548 aa12.95□□□□□ -0.34
PRKCB-202ENST00000321728 CACNA1AO00555 2505 aa12.95□□□□□ -0.34
PRKCB-202ENST00000321728 TIRAPP58753 221 aa12.95□□□□□ -0.34
PRKCB-202ENST00000321728 LINC00643Q86TS7 51 aa12.95□□□□□ -0.34
PRKCB-202ENST00000321728 MAPK1IP1LQ8NDC0 245 aa12.95□□□□□ -0.34
PRKCB-202ENST00000321728 FAM208BQ5VWN6 2430 aa12.95□□□□□ -0.34
PRKCB-202ENST00000321728 BAALC-AS2P0C853 105 aa12.94□□□□□ -0.34
PRKCB-202ENST00000321728 C9orf153Q5TBE3 101 aa12.94□□□□□ -0.34
PRKCB-202ENST00000321728 TLN2Q9Y4G6 2542 aa12.94□□□□□ -0.34
PRKCB-202ENST00000321728 IGLV5-45A0A087WSX0 123 aa12.93□□□□□ -0.34
PRKCB-202ENST00000321728 UCNP55089 124 aa12.93□□□□□ -0.34
PRKCB-202ENST00000321728 DEFB131AP59861 70 aa12.93□□□□□ -0.34
PRKCB-202ENST00000321728 ZNF415Q09FC8 603 aa12.93□□□□□ -0.34
PRKCB-202ENST00000321728 SOSTDC1Q6X4U4 206 aa12.93□□□□□ -0.34
PRKCB-202ENST00000321728 ZFYVE26Q68DK2 2539 aa12.92□□□□□ -0.34
PRKCB-202ENST00000321728 IGHV3OR16-12A0A075B7B8 117 aa12.92□□□□□ -0.34
PRKCB-202ENST00000321728 ATP5J2P56134 94 aa12.92□□□□□ -0.34
PRKCB-202ENST00000321728 PRIMA1Q86XR5 153 aa12.92□□□□□ -0.34
PRKCB-202ENST00000321728 RNF152Q8N8N0 203 aa12.92□□□□□ -0.34
PRKCB-202ENST00000321728 CCL19Q99731 98 aa12.92□□□□□ -0.34
PRKCB-202ENST00000321728 HERVK_113P63121 156 aa12.91□□□□□ -0.34
PRKCB-202ENST00000321728 COPS9Q8WXC6 57 aa12.91□□□□□ -0.34
PRKCB-202ENST00000321728 ACACBO00763 2458 aa12.91□□□□□ -0.34
PRKCB-202ENST00000321728 C3orf22Q8N5N4 141 aa12.91□□□□□ -0.34
PRKCB-202ENST00000321728 ANKRD17O75179 2603 aaKnown RBP12.9□□□□□ -0.34
PRKCB-202ENST00000321728 IGHV4-59P01825 116 aa12.9□□□□□ -0.34
PRKCB-202ENST00000321728 LINC00242Q5T6M2 205 aa12.9□□□□□ -0.34
PRKCB-202ENST00000321728 IGLV5-39A0A0G2JS06 123 aa12.9□□□□□ -0.34
PRKCB-202ENST00000321728 IGHV3-53P01767 116 aa12.9□□□□□ -0.34
PRKCB-202ENST00000321728 TRACP01848 142 aa12.9□□□□□ -0.34
PRKCB-202ENST00000321728 HOXD3P31249 432 aaPredicted RBP12.9□□□□□ -0.34
PRKCB-202ENST00000321728 SETD2Q9BYW2 2564 aaPredicted RBP12.9□□□□□ -0.35
PRKCB-202ENST00000321728 TRAV13-1A0A0B4J241 112 aa12.89□□□□□ -0.35
PRKCB-202ENST00000321728 NDUFA7O95182 113 aa12.89□□□□□ -0.35
PRKCB-202ENST00000321728 DNAJC30Q96LL9 226 aa12.89□□□□□ -0.35
PRKCB-202ENST00000321728 VPREB3Q9UKI3 123 aa12.89□□□□□ -0.35
PRKCB-202ENST00000321728 GAGE2AQ6NT46 116 aa12.89□□□□□ -0.35
PRKCB-202ENST00000321728 PPDPFQ9H3Y8 114 aa12.89□□□□□ -0.35
PRKCB-202ENST00000321728 RBMY1BA6NDE4 496 aaKnown RBP12.88□□□□□ -0.35
PRKCB-202ENST00000321728 RBMY1EA6NEQ0 496 aaKnown RBP12.88□□□□□ -0.35
PRKCB-202ENST00000321728 MSMBP08118 114 aa12.88□□□□□ -0.35
PRKCB-202ENST00000321728 RBMY1DP0C7P1 496 aaKnown RBP12.88□□□□□ -0.35
PRKCB-202ENST00000321728 ABCA12Q86UK0 2595 aa12.88□□□□□ -0.35
PRKCB-202ENST00000321728 WNK1Q9H4A3 2382 aa12.88□□□□□ -0.35
PRKCB-202ENST00000321728 BEAN1Q3B7T3 259 aa12.88□□□□□ -0.35
PRKCB-202ENST00000321728 C10orf105Q8TEF2 133 aa12.88□□□□□ -0.35
PRKCB-202ENST00000321728 FAM218AQ96MZ4 157 aa12.88□□□□□ -0.35
PRKCB-202ENST00000321728 SMIM1B2RUZ4 78 aa12.87□□□□□ -0.35
PRKCB-202ENST00000321728 UQCRQO14949 82 aa12.87□□□□□ -0.35
PRKCB-202ENST00000321728 LINC00694P0DN24 101 aa12.87□□□□□ -0.35
PRKCB-202ENST00000321728 C2CD3Q4AC94 2353 aa12.87□□□□□ -0.35
PRKCB-202ENST00000321728 Q9HAA7 133 aa12.87□□□□□ -0.35
PRKCB-202ENST00000321728 PEMTQ9UBM1 199 aa12.87□□□□□ -0.35
PRKCB-202ENST00000321728 FBN2P35556 2912 aa12.87□□□□□ -0.35
PRKCB-202ENST00000321728 IGSF10Q6WRI0 2623 aa12.86□□□□□ -0.35
PRKCB-202ENST00000321728 PIK3CD-AS1Q5SR53 167 aa12.86□□□□□ -0.35
PRKCB-202ENST00000321728 INAFM2P0DMQ5 153 aa12.85□□□□□ -0.35
PRKCB-202ENST00000321728 PRORYQ9H606 182 aa12.85□□□□□ -0.35
PRKCB-202ENST00000321728 C22orf24Q9Y442 160 aa12.85□□□□□ -0.35
PRKCB-202ENST00000321728 DEFB136Q30KP8 78 aa12.85□□□□□ -0.35
PRKCB-202ENST00000321728 DOPEY1Q5JWR5 2465 aa12.84□□□□□ -0.35
PRKCB-202ENST00000321728 LRRK2Q5S007 2527 aa12.84□□□□□ -0.35
PRKCB-202ENST00000321728 DEFB112Q30KQ8 113 aa12.84□□□□□ -0.35
PRKCB-202ENST00000321728 SONP18583 2426 aaKnown RBP12.84□□□□□ -0.35
PRKCB-202ENST00000321728 LINC00526Q96FQ7 95 aa12.84□□□□□ -0.35
PRKCB-202ENST00000321728 TMEM89A2RUT3 159 aa12.83□□□□□ -0.36
PRKCB-202ENST00000321728 SDIM1Q6ZPB5 146 aa12.83□□□□□ -0.36
PRKCB-202ENST00000321728 C11orf72Q8NBR9 251 aa12.83□□□□□ -0.36
PRKCB-202ENST00000321728 PIEZO1Q92508 2521 aa12.83□□□□□ -0.36
PRKCB-202ENST00000321728 ATP5G1P05496 136 aa12.83□□□□□ -0.36
PRKCB-202ENST00000321728 CXCL5P42830 114 aa12.83□□□□□ -0.36
PRKCB-202ENST00000321728 KLK5Q9Y337 293 aaPredicted RBP12.83□□□□□ -0.36
PRKCB-202ENST00000321728 TEX15Q9BXT5 2789 aa12.82□□□□□ -0.36
PRKCB-202ENST00000321728 PTPN13Q12923 2485 aa12.82□□□□□ -0.36
PRKCB-202ENST00000321728 EPG5Q9HCE0 2579 aa12.82□□□□□ -0.36
PRKCB-202ENST00000321728 MALP21145 153 aa12.82□□□□□ -0.36
PRKCB-202ENST00000321728 FAM222AQ5U5X8 452 aa12.82□□□□□ -0.36
PRKCB-202ENST00000321728 HIST2H2BCQ6DN03 193 aa12.82□□□□□ -0.36
PRKCB-202ENST00000321728 C18orf65Q6ZTR6 163 aa12.82□□□□□ -0.36
PRKCB-202ENST00000321728 C5orf38Q86SI9 138 aa12.82□□□□□ -0.36
PRKCB-202ENST00000321728 RS1O15537 224 aa12.81□□□□□ -0.36
PRKCB-202ENST00000321728 SLURP1P55000 103 aa12.81□□□□□ -0.36
PRKCB-202ENST00000321728 CHD6Q8TD26 2715 aa12.81□□□□□ -0.36
PRKCB-202ENST00000321728 NIPBLQ6KC79 2804 aaeCLIP12.81□□□□□ -0.364e-6■■■□□ 14.9
PRKCB-202ENST00000321728 CRPP02741 224 aa12.8□□□□□ -0.36
PRKCB-202ENST00000321728 COX7CP15954 63 aa12.79□□□□□ -0.36
PRKCB-202ENST00000321728 LOC107984640A0A0U1RRK4 108 aa12.79□□□□□ -0.36
PRKCB-202ENST00000321728 TRAV13-2A0A0B4J235 113 aa12.78□□□□□ -0.36
PRKCB-202ENST00000321728 A8MTW9 85 aa12.78□□□□□ -0.36
PRKCB-202ENST00000321728 B4DSR2 109 aa12.78□□□□□ -0.36
PRKCB-202ENST00000321728 AKAP9Q99996 3911 aa12.78□□□□□ -0.36
PRKCB-202ENST00000321728 NF1P21359 2839 aa12.78□□□□□ -0.36
PRKCB-202ENST00000321728 JMJD1CQ15652 2540 aa12.78□□□□□ -0.36
PRKCB-202ENST00000321728 F5H768 121 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms