RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 C5orf52A6NGY3 159 aa10.48□□□□□ -0.73
PDLIM5-202ENST00000318007 SIVA1O15304 175 aa10.48□□□□□ -0.73
PDLIM5-202ENST00000318007 KLK12Q9UKR0 248 aa10.48□□□□□ -0.73
PDLIM5-202ENST00000318007 TCTAP57738 103 aa10.48□□□□□ -0.73
PDLIM5-202ENST00000318007 OR5A1Q8NGJ0 315 aa10.48□□□□□ -0.73
PDLIM5-202ENST00000318007 IFITM10A6NMD0 228 aa10.47□□□□□ -0.73
PDLIM5-202ENST00000318007 TIRAPP58753 221 aa10.47□□□□□ -0.73
PDLIM5-202ENST00000318007 TMEM101Q96IK0 257 aa10.47□□□□□ -0.73
PDLIM5-202ENST00000318007 M0R2N4 97 aa10.46□□□□□ -0.73
PDLIM5-202ENST00000318007 SMIM6P0DI80 62 aa10.46□□□□□ -0.73
PDLIM5-202ENST00000318007 LINC00269Q8N2A0 174 aa10.46□□□□□ -0.73
PDLIM5-202ENST00000318007 VPS13DQ5THJ4 4388 aa10.46□□□□□ -0.73
PDLIM5-202ENST00000318007 IGLV4-3A0A075B6K6 122 aa10.46□□□□□ -0.74
PDLIM5-202ENST00000318007 IGIPA6NJ69 53 aa10.46□□□□□ -0.74
PDLIM5-202ENST00000318007 LINC00587B1AMM8 73 aa10.46□□□□□ -0.74
PDLIM5-202ENST00000318007 HIST1H2BLQ99880 126 aa10.46□□□□□ -0.74
PDLIM5-202ENST00000318007 HYDINQ4G0P3 5121 aa10.46□□□□□ -0.74
PDLIM5-202ENST00000318007 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-202ENST00000318007 ERASQ7Z444 233 aa10.45□□□□□ -0.74
PDLIM5-202ENST00000318007 FAM104AQ969W3 186 aa10.45□□□□□ -0.74
PDLIM5-202ENST00000318007 DNAH10Q8IVF4 4471 aa10.45□□□□□ -0.74
PDLIM5-202ENST00000318007 IGLV10-54A0A075B6I4 117 aa10.45□□□□□ -0.74
PDLIM5-202ENST00000318007 Q9HAA7 133 aa10.45□□□□□ -0.74
PDLIM5-202ENST00000318007 TRAV13-1A0A0B4J241 112 aa10.44□□□□□ -0.74
PDLIM5-202ENST00000318007 PRSS1P07477 247 aa10.44□□□□□ -0.74
PDLIM5-202ENST00000318007 G0S2P27469 103 aa10.44□□□□□ -0.74
PDLIM5-202ENST00000318007 KRTDAPP60985 99 aa10.44□□□□□ -0.74
PDLIM5-202ENST00000318007 Q6ZN92 141 aa10.44□□□□□ -0.74
PDLIM5-202ENST00000318007 ZNF664Q8N3J9 261 aa10.44□□□□□ -0.74
PDLIM5-202ENST00000318007 BAALCQ8WXS3 180 aa10.44□□□□□ -0.74
PDLIM5-202ENST00000318007 UBE2WQ96B02 151 aa10.44□□□□□ -0.74
PDLIM5-202ENST00000318007 IFI27L1Q96BM0 104 aa10.44□□□□□ -0.74
PDLIM5-202ENST00000318007 UPK3BQ9BT76 320 aa10.44□□□□□ -0.74
PDLIM5-202ENST00000318007 CDC42SE2Q9NRR3 84 aa10.44□□□□□ -0.74
PDLIM5-202ENST00000318007 SPANXA1Q9NS26 97 aa10.44□□□□□ -0.74
PDLIM5-202ENST00000318007 PRSS29PA6NIE9 313 aa10.43□□□□□ -0.74
PDLIM5-202ENST00000318007 MRPL52Q86TS9 123 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-202ENST00000318007 LINC00476Q8WZB0 136 aa10.43□□□□□ -0.74
PDLIM5-202ENST00000318007 TMEM141Q96I45 108 aa10.43□□□□□ -0.74
PDLIM5-202ENST00000318007 PMCHL2Q9BQD1 86 aa10.43□□□□□ -0.74
PDLIM5-202ENST00000318007 KRTAP1-5Q9BYS1 174 aa10.43□□□□□ -0.74
PDLIM5-202ENST00000318007 H7C423 109 aa10.43□□□□□ -0.74
PDLIM5-202ENST00000318007 DNAH10OSP0CZ25 163 aa10.42□□□□□ -0.74
PDLIM5-202ENST00000318007 ZNF25P17030 456 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-202ENST00000318007 LINC01556Q5JQF7 62 aa10.42□□□□□ -0.74
PDLIM5-202ENST00000318007 PACRGQ96M98 296 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-202ENST00000318007 TIMM17AQ99595 171 aa10.42□□□□□ -0.74
PDLIM5-202ENST00000318007 VCX2Q9H322 139 aa10.42□□□□□ -0.74
PDLIM5-202ENST00000318007 HSPB8Q9UJY1 196 aa10.42□□□□□ -0.74
PDLIM5-202ENST00000318007 KMT2CQ8NEZ4 4911 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-202ENST00000318007 REG3AQ06141 175 aa10.41□□□□□ -0.74
PDLIM5-202ENST00000318007 TEX43Q6ZNM6 134 aa10.41□□□□□ -0.74
PDLIM5-202ENST00000318007 A0A1B0GUV1 79 aa10.41□□□□□ -0.74
PDLIM5-202ENST00000318007 ATP5LO75964 103 aa10.41□□□□□ -0.74
PDLIM5-202ENST00000318007 CRPP02741 224 aa10.41□□□□□ -0.74
PDLIM5-202ENST00000318007 LGALS9CQ6DKI2 356 aa10.41□□□□□ -0.74
PDLIM5-202ENST00000318007 PYGO1Q9Y3Y4 419 aa10.41□□□□□ -0.74
PDLIM5-202ENST00000318007 SPATA12Q7Z6I5 190 aa10.4□□□□□ -0.74
PDLIM5-202ENST00000318007 OR10D4PQ8NGN7 298 aa10.4□□□□□ -0.74
PDLIM5-202ENST00000318007 C3orf79P0CE67 100 aa10.39□□□□□ -0.75
PDLIM5-202ENST00000318007 ENHOQ6UWT2 76 aa10.39□□□□□ -0.75
PDLIM5-202ENST00000318007 TIMM21Q9BVV7 248 aa10.39□□□□□ -0.75
PDLIM5-202ENST00000318007 MAP1LC3CQ9BXW4 147 aa10.39□□□□□ -0.75
PDLIM5-202ENST00000318007 CSDC2Q9Y534 153 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-202ENST00000318007 SMAGPQ0VAQ4 97 aa10.39□□□□□ -0.75
PDLIM5-202ENST00000318007 XCL1P47992 114 aa10.38□□□□□ -0.75
PDLIM5-202ENST00000318007 PKIAP61925 76 aa10.37□□□□□ -0.75
PDLIM5-202ENST00000318007 PMVKQ15126 192 aa10.37□□□□□ -0.75
PDLIM5-202ENST00000318007 C2orf88Q9BSF0 95 aa10.37□□□□□ -0.75
PDLIM5-202ENST00000318007 CST9LQ9H4G1 147 aa10.37□□□□□ -0.75
PDLIM5-202ENST00000318007 ALMS1Q8TCU4 4167 aa10.37□□□□□ -0.75
PDLIM5-202ENST00000318007 SACSQ9NZJ4 4579 aa10.37□□□□□ -0.75
PDLIM5-202ENST00000318007 MRPS36P82909 103 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-202ENST00000318007 DNAH2Q9P225 4427 aa10.36□□□□□ -0.75
PDLIM5-202ENST00000318007 A0A0J9YXV3 536 aa10.36□□□□□ -0.75
PDLIM5-202ENST00000318007 NBDYA0A0U1RRE5 68 aa10.36□□□□□ -0.75
PDLIM5-202ENST00000318007 SYS1-DBNDD2H3BUS1 97 aa10.36□□□□□ -0.75
PDLIM5-202ENST00000318007 AMELXQ99217 191 aa10.36□□□□□ -0.75
PDLIM5-202ENST00000318007 IGKV2D-24A0A075B6R9 120 aa10.35□□□□□ -0.75
PDLIM5-202ENST00000318007 LINC00959A0A1B0GUT2 108 aa10.35□□□□□ -0.75
PDLIM5-202ENST00000318007 LINC01549A6NIU2 74 aa10.35□□□□□ -0.75
PDLIM5-202ENST00000318007 MRPL35Q9NZE8 188 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-202ENST00000318007 TRAV9-2A0A087WT02 112 aa10.35□□□□□ -0.75
PDLIM5-202ENST00000318007 CCL25O15444 150 aa10.35□□□□□ -0.75
PDLIM5-202ENST00000318007 PAPPA-AS1Q5QFB9 102 aa10.35□□□□□ -0.75
PDLIM5-202ENST00000318007 ATOH7Q8N100 152 aa10.35□□□□□ -0.75
PDLIM5-202ENST00000318007 CHTOPQ9Y3Y2 248 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-202ENST00000318007 UBE2D1P51668 147 aa10.34□□□□□ -0.75
PDLIM5-202ENST00000318007 COX6A2Q02221 97 aa10.34□□□□□ -0.75
PDLIM5-202ENST00000318007 ODF1Q14990 250 aa10.34□□□□□ -0.75
PDLIM5-202ENST00000318007 PRR34Q9NV39 138 aa10.34□□□□□ -0.75
PDLIM5-202ENST00000318007 IBA57-AS1B1ANH7 110 aa10.33□□□□□ -0.76
PDLIM5-202ENST00000318007 C10orf126Q8N4M7 172 aa10.33□□□□□ -0.76
PDLIM5-202ENST00000318007 CHCHD10Q8WYQ3 142 aaPredicted RBP10.33□□□□□ -0.76
PDLIM5-202ENST00000318007 SS18Q15532 418 aa10.32□□□□□ -0.76
PDLIM5-202ENST00000318007 LINC00242Q5T6M2 205 aa10.32□□□□□ -0.76
PDLIM5-202ENST00000318007 CHAC1Q9BUX1 264 aa10.32□□□□□ -0.76
PDLIM5-202ENST00000318007 IGLV4-69A0A075B6H9 119 aa10.32□□□□□ -0.76
PDLIM5-202ENST00000318007 SCGB1D1O95968 90 aa10.32□□□□□ -0.76
PDLIM5-202ENST00000318007 C1orf43Q9BWL3 253 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 1871.1 ms