RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 IGLV1-51P01701 117 aa11.28□□□□□ -0.6
TSC22D3-201ENST00000315660 FAM104AQ969W3 186 aa11.28□□□□□ -0.6
TSC22D3-201ENST00000315660 MRPS36P82909 103 aaKnown RBP11.27□□□□□ -0.61
TSC22D3-201ENST00000315660 CEMP1Q6PRD7 247 aaPredicted RBP11.27□□□□□ -0.61
TSC22D3-201ENST00000315660 Q6ZUT4 128 aa11.27□□□□□ -0.61
TSC22D3-201ENST00000315660 UBE2D4Q9Y2X8 147 aa11.27□□□□□ -0.61
TSC22D3-201ENST00000315660 IGHV3-38A0A0C4DH36 116 aa11.27□□□□□ -0.61
TSC22D3-201ENST00000315660 ADARB2-AS1A8MUL3 147 aa11.27□□□□□ -0.61
TSC22D3-201ENST00000315660 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.26□□□□□ -0.61
TSC22D3-201ENST00000315660 IGKV2-29A2NJV5 120 aaPredicted RBP11.26□□□□□ -0.61
TSC22D3-201ENST00000315660 A4D1N5 150 aa11.26□□□□□ -0.61
TSC22D3-201ENST00000315660 MT-ATP8P03928 68 aa11.26□□□□□ -0.61
TSC22D3-201ENST00000315660 ANKRD29Q8N6D5 301 aa11.26□□□□□ -0.61
TSC22D3-201ENST00000315660 XGP55808 180 aa11.25□□□□□ -0.61
TSC22D3-201ENST00000315660 IGHV3-64A0A075B6Q5 118 aa11.25□□□□□ -0.61
TSC22D3-201ENST00000315660 SMR3AQ99954 134 aa11.25□□□□□ -0.61
TSC22D3-201ENST00000315660 A0A0B4J2C4 111 aa11.24□□□□□ -0.61
TSC22D3-201ENST00000315660 WFDC10AQ9H1F0 79 aa11.24□□□□□ -0.61
TSC22D3-201ENST00000315660 TRAV4A0A0B4J268 109 aa11.24□□□□□ -0.61
TSC22D3-201ENST00000315660 TRBV10-1A0A0K0K1A3 114 aa11.24□□□□□ -0.61
TSC22D3-201ENST00000315660 GIG44P09565 113 aaPredicted RBP11.24□□□□□ -0.61
TSC22D3-201ENST00000315660 RPL36AP83881 106 aaKnown RBP11.24□□□□□ -0.61
TSC22D3-201ENST00000315660 RNASE13Q5GAN3 156 aaKnown RBP11.24□□□□□ -0.61
TSC22D3-201ENST00000315660 Q6ZTI0 123 aa11.24□□□□□ -0.61
TSC22D3-201ENST00000315660 RPL36ALQ969Q0 106 aaKnown RBP11.24□□□□□ -0.61
TSC22D3-201ENST00000315660 TIMM21Q9BVV7 248 aa11.24□□□□□ -0.61
TSC22D3-201ENST00000315660 FASNP49327 2511 aaKnown RBP11.24□□□□□ -0.61
TSC22D3-201ENST00000315660 NIPBLQ6KC79 2804 aaeCLIP11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 TINCRA0A1B0GVN0 87 aa11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 IGHV3-33P01772 117 aa11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 C16orf74Q96GX8 76 aa11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 SETXQ7Z333 2677 aaKnown RBP11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 K7EQD1 137 aa11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 M0QXV9 152 aa11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 SLC25A20O43772 301 aa11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 RPL35AP18077 110 aaKnown RBP11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 DAZ2Q13117 558 aaKnown RBP11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 DGAT2L7PQ6IED9 249 aa11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 GEMIN7Q9H840 131 aaKnown RBP11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 NOP10Q9NPE3 64 aaKnown RBP11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 C19orf73Q9NVV2 129 aa11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 ERG28Q9UKR5 140 aa11.23□□□□□ -0.61
TSC22D3-201ENST00000315660 EIF4EBP3O60516 100 aaPredicted RBP11.22□□□□□ -0.61
TSC22D3-201ENST00000315660 JMJD1CQ15652 2540 aa11.22□□□□□ -0.61
TSC22D3-201ENST00000315660 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.21□□□□□ -0.61
TSC22D3-201ENST00000315660 C9JAW5 83 aa11.21□□□□□ -0.61
TSC22D3-201ENST00000315660 IGHV3-30-3P0DP02 117 aa11.21□□□□□ -0.61
TSC22D3-201ENST00000315660 MUSTN1Q8IVN3 82 aa11.21□□□□□ -0.61
TSC22D3-201ENST00000315660 TMEM262E9PQX1 116 aa11.21□□□□□ -0.62
TSC22D3-201ENST00000315660 DAZ4Q86SG3 579 aaKnown RBP11.21□□□□□ -0.62
TSC22D3-201ENST00000315660 DAZ3Q9NR90 486 aaKnown RBP11.21□□□□□ -0.62
TSC22D3-201ENST00000315660 HIVEP2P31629 2446 aa11.21□□□□□ -0.62
TSC22D3-201ENST00000315660 IGHV1-58A0A0C4DH39 117 aa11.2□□□□□ -0.62
TSC22D3-201ENST00000315660 H7C2G1 150 aa11.2□□□□□ -0.62
TSC22D3-201ENST00000315660 Q1RN00 199 aa11.2□□□□□ -0.62
TSC22D3-201ENST00000315660 TRGV2A0A075B6R0 118 aa11.19□□□□□ -0.62
TSC22D3-201ENST00000315660 PF4P02776 101 aa11.19□□□□□ -0.62
TSC22D3-201ENST00000315660 A0A0J9YXY3 114 aa11.19□□□□□ -0.62
TSC22D3-201ENST00000315660 KRTAP10-3P60369 221 aa11.19□□□□□ -0.62
TSC22D3-201ENST00000315660 ATXN8Q156A1 80 aa11.18□□□□□ -0.62
TSC22D3-201ENST00000315660 PLAC8L1A1L4L8 177 aa11.17□□□□□ -0.62
TSC22D3-201ENST00000315660 LY6G6DO95868 133 aa11.17□□□□□ -0.62
TSC22D3-201ENST00000315660 VSIG2Q96IQ7 327 aa11.17□□□□□ -0.62
TSC22D3-201ENST00000315660 TRAV26-1A0A087WT03 109 aa11.17□□□□□ -0.62
TSC22D3-201ENST00000315660 TRAV8-3A0A0A6YYJ7 113 aa11.17□□□□□ -0.62
TSC22D3-201ENST00000315660 CSNK1G2-AS1Q8NCQ2 148 aa11.17□□□□□ -0.62
TSC22D3-201ENST00000315660 NOTCH3Q9UM47 2321 aa11.17□□□□□ -0.62
TSC22D3-201ENST00000315660 GAGE7O76087 117 aa11.16□□□□□ -0.62
TSC22D3-201ENST00000315660 GAGE12FP0CL80 117 aa11.16□□□□□ -0.62
TSC22D3-201ENST00000315660 GAGE12GP0CL81 117 aa11.16□□□□□ -0.62
TSC22D3-201ENST00000315660 GAGE12IP0CL82 117 aa11.16□□□□□ -0.62
TSC22D3-201ENST00000315660 NDUFA12Q9UI09 145 aa11.16□□□□□ -0.62
TSC22D3-201ENST00000315660 GCN1Q92616 2671 aaKnown RBP11.16□□□□□ -0.62
TSC22D3-201ENST00000315660 GAGE12JA6NER3 117 aa11.16□□□□□ -0.62
TSC22D3-201ENST00000315660 TIRAPP58753 221 aa11.16□□□□□ -0.62
TSC22D3-201ENST00000315660 GAGE4Q13068 117 aa11.16□□□□□ -0.62
TSC22D3-201ENST00000315660 GAGE5Q13069 117 aa11.16□□□□□ -0.62
TSC22D3-201ENST00000315660 LINC01620Q4KN68 170 aa11.15□□□□□ -0.62
TSC22D3-201ENST00000315660 OVOL2Q9BRP0 275 aa11.15□□□□□ -0.62
TSC22D3-201ENST00000315660 CSDC2Q9Y534 153 aaKnown RBP11.15□□□□□ -0.62
TSC22D3-201ENST00000315660 HECTD1Q9ULT8 2610 aa11.15□□□□□ -0.62
TSC22D3-201ENST00000315660 TRBV30A0A0K0K1B3 111 aa11.14□□□□□ -0.63
TSC22D3-201ENST00000315660 HERVK_113P63121 156 aa11.14□□□□□ -0.63
TSC22D3-201ENST00000315660 LITAFQ99732 161 aa11.14□□□□□ -0.63
TSC22D3-201ENST00000315660 IGLV5-45A0A087WSX0 123 aa11.13□□□□□ -0.63
TSC22D3-201ENST00000315660 TRBV6-4A0A1B0GX49 114 aa11.13□□□□□ -0.63
TSC22D3-201ENST00000315660 LINC00482Q8N8I6 264 aa11.13□□□□□ -0.63
TSC22D3-201ENST00000315660 CDKN2A-AS1Q9UH64 79 aa11.13□□□□□ -0.63
TSC22D3-201ENST00000315660 TRIAP1O43715 76 aa11.13□□□□□ -0.63
TSC22D3-201ENST00000315660 LINC00694P0DN24 101 aa11.13□□□□□ -0.63
TSC22D3-201ENST00000315660 ZFAND6Q6FIF0 208 aa11.13□□□□□ -0.63
TSC22D3-201ENST00000315660 NTM-AS1Q6ZSK4 140 aa11.13□□□□□ -0.63
TSC22D3-201ENST00000315660 NTN5Q8WTR8 489 aaPredicted RBP11.13□□□□□ -0.63
TSC22D3-201ENST00000315660 TRGV4A0A0C4DH28 118 aa11.12□□□□□ -0.63
TSC22D3-201ENST00000315660 UBE2L6O14933 153 aa11.12□□□□□ -0.63
TSC22D3-201ENST00000315660 LINC01600Q96MT4 127 aa11.12□□□□□ -0.63
TSC22D3-201ENST00000315660 CITED1Q99966 193 aa11.12□□□□□ -0.63
TSC22D3-201ENST00000315660 SPANXDQ9BXN6 97 aa11.12□□□□□ -0.63
TSC22D3-201ENST00000315660 SPANXCQ9NY87 97 aa11.12□□□□□ -0.63
TSC22D3-201ENST00000315660 TRBV10-2A0A0K0K1G8 114 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms