RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 C20orf203Q8NBC4 194 aa5.23□□□□□ -1.57
TPM3-203ENST00000312970 DPH3Q96FX2 82 aa5.23□□□□□ -1.57
TPM3-203ENST00000312970 PGLYRP4Q96LB8 373 aa5.23□□□□□ -1.57
TPM3-203ENST00000312970 IGLV4-60A0A075B6I1 120 aa5.22□□□□□ -1.57
TPM3-203ENST00000312970 UBE2L6O14933 153 aa5.22□□□□□ -1.57
TPM3-203ENST00000312970 CNBPP62633 177 aaKnown RBP5.22□□□□□ -1.57
TPM3-203ENST00000312970 TWIST1Q15672 202 aa5.22□□□□□ -1.57
TPM3-203ENST00000312970 UQCC3Q6UW78 93 aa5.22□□□□□ -1.57
TPM3-203ENST00000312970 CSDC2Q9Y534 153 aaKnown RBP5.22□□□□□ -1.57
TPM3-203ENST00000312970 TRBV20OR9-2A0A075B6H5 130 aa5.21□□□□□ -1.58
TPM3-203ENST00000312970 IGHV3-64A0A075B6Q5 118 aa5.21□□□□□ -1.58
TPM3-203ENST00000312970 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.21□□□□□ -1.58
TPM3-203ENST00000312970 PANO1I0J062 215 aa5.21□□□□□ -1.58
TPM3-203ENST00000312970 BCL2P10415 239 aa5.21□□□□□ -1.58
TPM3-203ENST00000312970 AMTP48728 403 aa5.21□□□□□ -1.58
TPM3-203ENST00000312970 GFRA4Q9GZZ7 299 aa5.21□□□□□ -1.58
TPM3-203ENST00000312970 SLPIP03973 132 aa5.2□□□□□ -1.58
TPM3-203ENST00000312970 CTRLP40313 264 aa5.2□□□□□ -1.58
TPM3-203ENST00000312970 CIRBPQ14011 172 aaKnown RBP5.2□□□□□ -1.58
TPM3-203ENST00000312970 FAM74A3Q4VXF1 159 aa5.2□□□□□ -1.58
TPM3-203ENST00000312970 GATD1Q8NB37 220 aa5.2□□□□□ -1.58
TPM3-203ENST00000312970 RNF185Q96GF1 192 aa5.2□□□□□ -1.58
TPM3-203ENST00000312970 CNFNQ9BYD5 112 aa5.2□□□□□ -1.58
TPM3-203ENST00000312970 TNXBP22105 4242 aa5.2□□□□□ -1.58
TPM3-203ENST00000312970 HNRNPA3P51991 378 aaKnown RBP5.19□□□□□ -1.58
TPM3-203ENST00000312970 TEX261Q6UWH6 196 aa5.19□□□□□ -1.58
TPM3-203ENST00000312970 SMIM15Q7Z3B0 74 aa5.19□□□□□ -1.58
TPM3-203ENST00000312970 SLC51BQ86UW2 128 aa5.19□□□□□ -1.58
TPM3-203ENST00000312970 RNASE7Q9H1E1 156 aaKnown RBP5.19□□□□□ -1.58
TPM3-203ENST00000312970 RPP21Q9H633 154 aaKnown RBP5.19□□□□□ -1.58
TPM3-203ENST00000312970 A0A087WYN8 130 aa5.18□□□□□ -1.58
TPM3-203ENST00000312970 TRAV26-2A0A0B4J265 109 aa5.18□□□□□ -1.58
TPM3-203ENST00000312970 H7C423 109 aa5.18□□□□□ -1.58
TPM3-203ENST00000312970 K7EN84 100 aa5.18□□□□□ -1.58
TPM3-203ENST00000312970 NCR2O95944 276 aa5.18□□□□□ -1.58
TPM3-203ENST00000312970 RPL13AP40429 203 aaKnown RBP5.18□□□□□ -1.58
TPM3-203ENST00000312970 AMMECR1LQ6DCA0 310 aa5.18□□□□□ -1.58
TPM3-203ENST00000312970 Q6ZRU5 148 aa5.18□□□□□ -1.58
TPM3-203ENST00000312970 TCTE3Q8IZS6 198 aa5.18□□□□□ -1.58
TPM3-203ENST00000312970 IGKV3OR2-268A0A0C4DH90 116 aa5.17□□□□□ -1.58
TPM3-203ENST00000312970 A8MWL6 223 aa5.17□□□□□ -1.58
TPM3-203ENST00000312970 RPS10P46783 165 aaKnown RBP5.17□□□□□ -1.58
TPM3-203ENST00000312970 FOXA3P55318 350 aaPredicted RBP5.17□□□□□ -1.58
TPM3-203ENST00000312970 GTSF1Q8WW33 167 aa5.17□□□□□ -1.58
TPM3-203ENST00000312970 RPL39LQ96EH5 51 aaKnown RBP5.17□□□□□ -1.58
TPM3-203ENST00000312970 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.16□□□□□ -1.58
TPM3-203ENST00000312970 IGKV2-29A2NJV5 120 aaPredicted RBP5.16□□□□□ -1.58
TPM3-203ENST00000312970 SDHAF1A6NFY7 115 aa5.16□□□□□ -1.58
TPM3-203ENST00000312970 TMEM250H0YL14 139 aa5.16□□□□□ -1.58
TPM3-203ENST00000312970 GATCO43716 136 aaKnown RBP5.16□□□□□ -1.58
TPM3-203ENST00000312970 APCSP02743 223 aa5.16□□□□□ -1.58
TPM3-203ENST00000312970 CHTF8P0CG12 524 aa5.16□□□□□ -1.58
TPM3-203ENST00000312970 PMCHP20382 165 aa5.16□□□□□ -1.58
TPM3-203ENST00000312970 COX6A2Q02221 97 aa5.16□□□□□ -1.58
TPM3-203ENST00000312970 C15orf56Q8N910 161 aa5.16□□□□□ -1.58
TPM3-203ENST00000312970 SPACA4Q8TDM5 124 aa5.16□□□□□ -1.58
TPM3-203ENST00000312970 CHCHD10Q8WYQ3 142 aaPredicted RBP5.16□□□□□ -1.58
TPM3-203ENST00000312970 PLAC8Q9NZF1 115 aa5.16□□□□□ -1.58
TPM3-203ENST00000312970 I3L3M4 83 aa5.15□□□□□ -1.59
TPM3-203ENST00000312970 NDUFS6O75380 124 aaKnown RBP5.15□□□□□ -1.59
TPM3-203ENST00000312970 FGF6P10767 208 aa5.15□□□□□ -1.59
TPM3-203ENST00000312970 ZNF25P17030 456 aaPredicted RBP5.15□□□□□ -1.59
TPM3-203ENST00000312970 HIGD2BQ4VC39 106 aa5.15□□□□□ -1.59
TPM3-203ENST00000312970 FAM231DQ6ZW35 169 aa5.15□□□□□ -1.59
TPM3-203ENST00000312970 C7orf33Q8WU49 177 aa5.15□□□□□ -1.59
TPM3-203ENST00000312970 TMEM101Q96IK0 257 aa5.15□□□□□ -1.59
TPM3-203ENST00000312970 BTF3L4Q96K17 158 aa5.15□□□□□ -1.59
TPM3-203ENST00000312970 A0A087WZ39 114 aa5.14□□□□□ -1.59
TPM3-203ENST00000312970 GVQW2A0A096LPI5 108 aaPredicted RBP5.14□□□□□ -1.59
TPM3-203ENST00000312970 TRBV6-5A0A0K0K1A5 114 aa5.14□□□□□ -1.59
TPM3-203ENST00000312970 FAM231BA6NCW3 169 aa5.14□□□□□ -1.59
TPM3-203ENST00000312970 MT1HL1P0DM35 61 aa5.14□□□□□ -1.59
TPM3-203ENST00000312970 CTAG1AP78358 180 aa5.14□□□□□ -1.59
TPM3-203ENST00000312970 OR5A1Q8NGJ0 315 aa5.14□□□□□ -1.59
TPM3-203ENST00000312970 PRSS3P2Q8NHM4 247 aa5.14□□□□□ -1.59
TPM3-203ENST00000312970 BORCS7Q96B45 105 aa5.14□□□□□ -1.59
TPM3-203ENST00000312970 KRTAP9-2Q9BYQ4 174 aa5.14□□□□□ -1.59
TPM3-203ENST00000312970 ST20Q9HBF5 79 aa5.14□□□□□ -1.59
TPM3-203ENST00000312970 IGKV2-24A0A0C4DH68 120 aa5.13□□□□□ -1.59
TPM3-203ENST00000312970 LINC00959A0A1B0GUT2 108 aa5.13□□□□□ -1.59
TPM3-203ENST00000312970 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.13□□□□□ -1.59
TPM3-203ENST00000312970 PHOX2AO14813 284 aa5.13□□□□□ -1.59
TPM3-203ENST00000312970 ESDP10768 282 aa5.13□□□□□ -1.59
TPM3-203ENST00000312970 CEBPGP53567 150 aa5.13□□□□□ -1.59
TPM3-203ENST00000312970 ALKAL2Q6UX46 152 aa5.13□□□□□ -1.59
TPM3-203ENST00000312970 STPG4Q8N801 248 aa5.13□□□□□ -1.59
TPM3-203ENST00000312970 LYPD6BQ8NI32 183 aa5.13□□□□□ -1.59
TPM3-203ENST00000312970 URB1-AS1Q96HZ7 61 aa5.13□□□□□ -1.59
TPM3-203ENST00000312970 IGHV1-58A0A0C4DH39 117 aa5.12□□□□□ -1.59
TPM3-203ENST00000312970 A0A1B0GUT8 65 aa5.12□□□□□ -1.59
TPM3-203ENST00000312970 CCL25O15444 150 aa5.12□□□□□ -1.59
TPM3-203ENST00000312970 TSHBP01222 138 aa5.12□□□□□ -1.59
TPM3-203ENST00000312970 RAB4AP20338 218 aa5.12□□□□□ -1.59
TPM3-203ENST00000312970 XCL1P47992 114 aa5.12□□□□□ -1.59
TPM3-203ENST00000312970 POLR2KP53803 58 aaKnown RBP5.12□□□□□ -1.59
TPM3-203ENST00000312970 SS18Q15532 418 aa5.12□□□□□ -1.59
TPM3-203ENST00000312970 TSKUQ8WUA8 353 aa5.12□□□□□ -1.59
TPM3-203ENST00000312970 EIF5A2Q9GZV4 153 aaKnown RBP5.12□□□□□ -1.59
TPM3-203ENST00000312970 TMEM191AQ9H0A3 160 aa5.12□□□□□ -1.59
TPM3-203ENST00000312970 LINC00474Q9P2X8 69 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms