RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 BTF3P20290 206 aaKnown RBP8.51□□□□□ -1.05
CHMP2A-201ENST00000312547 G0S2P27469 103 aa8.51□□□□□ -1.05
CHMP2A-201ENST00000312547 SMAGPQ0VAQ4 97 aa8.51□□□□□ -1.05
CHMP2A-201ENST00000312547 RNASEKQ6P5S7 137 aaKnown RBP8.51□□□□□ -1.05
CHMP2A-201ENST00000312547 BAGE3Q86Y29 109 aa8.51□□□□□ -1.05
CHMP2A-201ENST00000312547 OR5A1Q8NGJ0 315 aa8.51□□□□□ -1.05
CHMP2A-201ENST00000312547 TOMM6Q96B49 74 aa8.51□□□□□ -1.05
CHMP2A-201ENST00000312547 SPANXA1Q9NS26 97 aa8.51□□□□□ -1.05
CHMP2A-201ENST00000312547 PYGO1Q9Y3Y4 419 aa8.51□□□□□ -1.05
CHMP2A-201ENST00000312547 IGIPA6NJ69 53 aa8.5□□□□□ -1.05
CHMP2A-201ENST00000312547 SERF1AO75920 110 aa8.5□□□□□ -1.05
CHMP2A-201ENST00000312547 ANGP03950 147 aaKnown RBP8.5□□□□□ -1.05
CHMP2A-201ENST00000312547 MRPS36P82909 103 aaKnown RBP8.5□□□□□ -1.05
CHMP2A-201ENST00000312547 ENHOQ6UWT2 76 aa8.5□□□□□ -1.05
CHMP2A-201ENST00000312547 LINC00269Q8N2A0 174 aa8.5□□□□□ -1.05
CHMP2A-201ENST00000312547 TMEM101Q96IK0 257 aa8.5□□□□□ -1.05
CHMP2A-201ENST00000312547 CDC42SE2Q9NRR3 84 aa8.5□□□□□ -1.05
CHMP2A-201ENST00000312547 DNAH2Q9P225 4427 aa8.49□□□□□ -1.05
CHMP2A-201ENST00000312547 LINC01549A6NIU2 74 aa8.49□□□□□ -1.05
CHMP2A-201ENST00000312547 COA6Q5JTJ3 125 aaKnown RBP8.49□□□□□ -1.05
CHMP2A-201ENST00000312547 ZNF664Q8N3J9 261 aa8.49□□□□□ -1.05
CHMP2A-201ENST00000312547 IGLV4-3A0A075B6K6 122 aa8.48□□□□□ -1.05
CHMP2A-201ENST00000312547 NUPR1O60356 82 aa8.48□□□□□ -1.05
CHMP2A-201ENST00000312547 HBDP02042 147 aa8.48□□□□□ -1.05
CHMP2A-201ENST00000312547 NPSP0C0P6 89 aa8.48□□□□□ -1.05
CHMP2A-201ENST00000312547 PMCHL1Q16048 86 aa8.48□□□□□ -1.05
CHMP2A-201ENST00000312547 PDZD11Q5EBL8 140 aa8.48□□□□□ -1.05
CHMP2A-201ENST00000312547 DGAT2L7PQ6IED9 249 aa8.48□□□□□ -1.05
CHMP2A-201ENST00000312547 Q6ZUT4 128 aa8.48□□□□□ -1.05
CHMP2A-201ENST00000312547 UBE2WQ96B02 151 aa8.48□□□□□ -1.05
CHMP2A-201ENST00000312547 TIMM17AQ99595 171 aa8.48□□□□□ -1.05
CHMP2A-201ENST00000312547 OPRPNQ99935 248 aaPredicted RBP8.48□□□□□ -1.05
CHMP2A-201ENST00000312547 TRAV8-3A0A0A6YYJ7 113 aa8.47□□□□□ -1.05
CHMP2A-201ENST00000312547 HSBP1O75506 76 aa8.47□□□□□ -1.05
CHMP2A-201ENST00000312547 REG3AQ06141 175 aa8.47□□□□□ -1.05
CHMP2A-201ENST00000312547 ERASQ7Z444 233 aa8.47□□□□□ -1.05
CHMP2A-201ENST00000312547 C6orf223Q8N319 242 aa8.47□□□□□ -1.05
CHMP2A-201ENST00000312547 CRPP02741 224 aa8.46□□□□□ -1.06
CHMP2A-201ENST00000312547 MIAQ16674 131 aa8.46□□□□□ -1.06
CHMP2A-201ENST00000312547 C1orf134Q5TEV5 83 aa8.46□□□□□ -1.06
CHMP2A-201ENST00000312547 CLPSL2Q6UWE3 100 aa8.46□□□□□ -1.06
CHMP2A-201ENST00000312547 Q6ZRN7 208 aaPredicted RBP8.46□□□□□ -1.06
CHMP2A-201ENST00000312547 TMEM141Q96I45 108 aa8.46□□□□□ -1.06
CHMP2A-201ENST00000312547 SCGB3A1Q96QR1 104 aa8.46□□□□□ -1.06
CHMP2A-201ENST00000312547 RNASE13Q5GAN3 156 aaKnown RBP8.45□□□□□ -1.06
CHMP2A-201ENST00000312547 LINC00173Q6ZV60 143 aa8.45□□□□□ -1.06
CHMP2A-201ENST00000312547 NFE4Q86UQ8 179 aa8.45□□□□□ -1.06
CHMP2A-201ENST00000312547 FAM19A2Q8N3H0 131 aa8.45□□□□□ -1.06
CHMP2A-201ENST00000312547 AMELXQ99217 191 aa8.45□□□□□ -1.06
CHMP2A-201ENST00000312547 Q9HAA7 133 aa8.45□□□□□ -1.06
CHMP2A-201ENST00000312547 TRAV8-4A0A0B4J246 113 aa8.44□□□□□ -1.06
CHMP2A-201ENST00000312547 NDUFA6P56556 154 aa8.44□□□□□ -1.06
CHMP2A-201ENST00000312547 KRTAP26-1Q6PEX3 210 aa8.44□□□□□ -1.06
CHMP2A-201ENST00000312547 DNAH17Q9UFH2 4485 aa8.44□□□□□ -1.06
CHMP2A-201ENST00000312547 HECTD4Q9Y4D8 3996 aa8.43□□□□□ -1.06
CHMP2A-201ENST00000312547 LINC00959A0A1B0GUT2 108 aa8.43□□□□□ -1.06
CHMP2A-201ENST00000312547 RTL8CO15255 209 aa8.43□□□□□ -1.06
CHMP2A-201ENST00000312547 RMI2Q96E14 147 aa8.43□□□□□ -1.06
CHMP2A-201ENST00000312547 IGKV3OR2-268A0A0C4DH90 116 aa8.42□□□□□ -1.06
CHMP2A-201ENST00000312547 ATP5LO75964 103 aa8.42□□□□□ -1.06
CHMP2A-201ENST00000312547 PAPPA-AS1Q5QFB9 102 aa8.42□□□□□ -1.06
CHMP2A-201ENST00000312547 ZC2HC1BQ5TFG8 222 aa8.42□□□□□ -1.06
CHMP2A-201ENST00000312547 Q6ZN92 141 aa8.42□□□□□ -1.06
CHMP2A-201ENST00000312547 TEX43Q6ZNM6 134 aa8.42□□□□□ -1.06
CHMP2A-201ENST00000312547 BAALCQ8WXS3 180 aa8.42□□□□□ -1.06
CHMP2A-201ENST00000312547 C1orf43Q9BWL3 253 aa8.42□□□□□ -1.06
CHMP2A-201ENST00000312547 TM2D2Q9BX73 214 aa8.42□□□□□ -1.06
CHMP2A-201ENST00000312547 VCX2Q9H322 139 aa8.42□□□□□ -1.06
CHMP2A-201ENST00000312547 COX11Q9Y6N1 276 aa8.42□□□□□ -1.06
CHMP2A-201ENST00000312547 IGLV10-54A0A075B6I4 117 aa8.41□□□□□ -1.06
CHMP2A-201ENST00000312547 IGKV2D-24A0A075B6R9 120 aa8.41□□□□□ -1.06
CHMP2A-201ENST00000312547 IFITM10A6NMD0 228 aa8.41□□□□□ -1.06
CHMP2A-201ENST00000312547 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.41□□□□□ -1.06
CHMP2A-201ENST00000312547 CCL25O15444 150 aa8.41□□□□□ -1.06
CHMP2A-201ENST00000312547 MAPKAPK5-AS1Q8N8E1 139 aa8.41□□□□□ -1.06
CHMP2A-201ENST00000312547 CHCHD10Q8WYQ3 142 aaPredicted RBP8.41□□□□□ -1.06
CHMP2A-201ENST00000312547 TRAV13-1A0A0B4J241 112 aa8.4□□□□□ -1.06
CHMP2A-201ENST00000312547 UBE2D1P51668 147 aa8.4□□□□□ -1.06
CHMP2A-201ENST00000312547 SS18Q15532 418 aa8.4□□□□□ -1.06
CHMP2A-201ENST00000312547 FAM19A3Q7Z5A8 133 aa8.4□□□□□ -1.06
CHMP2A-201ENST00000312547 CST9LQ9H4G1 147 aa8.4□□□□□ -1.06
CHMP2A-201ENST00000312547 LEPROTL1O95214 131 aa8.39□□□□□ -1.07
CHMP2A-201ENST00000312547 PMVKQ15126 192 aa8.39□□□□□ -1.07
CHMP2A-201ENST00000312547 IFI27L1Q96BM0 104 aa8.39□□□□□ -1.07
CHMP2A-201ENST00000312547 PACRGQ96M98 296 aaPredicted RBP8.39□□□□□ -1.07
CHMP2A-201ENST00000312547 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
CHMP2A-201ENST00000312547 FAT2Q9NYQ8 4349 aa8.38□□□□□ -1.07
CHMP2A-201ENST00000312547 GAGE12HA6NDE8 117 aa8.38□□□□□ -1.07
CHMP2A-201ENST00000312547 XCL1P47992 114 aa8.38□□□□□ -1.07
CHMP2A-201ENST00000312547 FOXI1Q12951 378 aa8.38□□□□□ -1.07
CHMP2A-201ENST00000312547 LINC00242Q5T6M2 205 aa8.38□□□□□ -1.07
CHMP2A-201ENST00000312547 CD164L2Q6UWJ8 174 aa8.38□□□□□ -1.07
CHMP2A-201ENST00000312547 HSPB8Q9UJY1 196 aa8.38□□□□□ -1.07
CHMP2A-201ENST00000312547 PRSS29PA6NIE9 313 aa8.37□□□□□ -1.07
CHMP2A-201ENST00000312547 FABP4P15090 132 aa8.37□□□□□ -1.07
CHMP2A-201ENST00000312547 RYR1P21817 5038 aa8.36□□□□□ -1.07
CHMP2A-201ENST00000312547 KIAA1109Q2LD37 5005 aa8.36□□□□□ -1.07
CHMP2A-201ENST00000312547 TRAV12-1A0A0B4J245 112 aa8.36□□□□□ -1.07
CHMP2A-201ENST00000312547 IGHV3OR16-9A0A0B4J2B5 98 aa8.36□□□□□ -1.07
CHMP2A-201ENST00000312547 LRCOL1A6NCL2 159 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms