RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 FRMPD3Q5JV73 1810 aa10.19□□□□□ -0.78
CLCN6-201ENST00000312413 NOTCH2Q04721 2471 aa10.18□□□□□ -0.78
CLCN6-201ENST00000312413 TRBV6-4A0A1B0GX49 114 aa10.18□□□□□ -0.78
CLCN6-201ENST00000312413 DEFB114Q30KQ6 69 aa10.18□□□□□ -0.78
CLCN6-201ENST00000312413 CSPG4Q6UVK1 2322 aa10.18□□□□□ -0.78
CLCN6-201ENST00000312413 WISP2O76076 250 aa10.18□□□□□ -0.78
CLCN6-201ENST00000312413 KIR2DL5BQ8NHK3 375 aa10.18□□□□□ -0.78
CLCN6-201ENST00000312413 C11orf45Q8TAV5 145 aa10.18□□□□□ -0.78
CLCN6-201ENST00000312413 COL4A3Q01955 1670 aa10.17□□□□□ -0.78
CLCN6-201ENST00000312413 Q8N976 141 aa10.17□□□□□ -0.78
CLCN6-201ENST00000312413 DCANP1Q8TF63 244 aa10.17□□□□□ -0.78
CLCN6-201ENST00000312413 TSHBP01222 138 aa10.17□□□□□ -0.78
CLCN6-201ENST00000312413 PROK1P58294 105 aa10.17□□□□□ -0.78
CLCN6-201ENST00000312413 PLXNB3Q9ULL4 1909 aa10.17□□□□□ -0.78
CLCN6-201ENST00000312413 Q6Q795 121 aa10.16□□□□□ -0.78
CLCN6-201ENST00000312413 SONP18583 2426 aaKnown RBP10.16□□□□□ -0.78
CLCN6-201ENST00000312413 DNAJC9-AS1A6NH13 148 aa10.16□□□□□ -0.78
CLCN6-201ENST00000312413 Q6ZS46 218 aa10.16□□□□□ -0.78
CLCN6-201ENST00000312413 BDP1A6H8Y1 2624 aa10.16□□□□□ -0.78
CLCN6-201ENST00000312413 C2CD3Q4AC94 2353 aa10.16□□□□□ -0.78
CLCN6-201ENST00000312413 PRR4Q16378 134 aa10.16□□□□□ -0.78
CLCN6-201ENST00000312413 A0A087WZ39 114 aa10.15□□□□□ -0.78
CLCN6-201ENST00000312413 A0A1W2PNU3 283 aaPredicted RBP10.15□□□□□ -0.78
CLCN6-201ENST00000312413 CRYGDP07320 174 aa10.15□□□□□ -0.78
CLCN6-201ENST00000312413 EBI3Q14213 229 aa10.15□□□□□ -0.78
CLCN6-201ENST00000312413 HIVEP2P31629 2446 aa10.15□□□□□ -0.78
CLCN6-201ENST00000312413 ZFHX2Q9C0A1 2572 aaPredicted RBP10.15□□□□□ -0.78
CLCN6-201ENST00000312413 CACNA1AO00555 2505 aa10.15□□□□□ -0.78
CLCN6-201ENST00000312413 Q6JHZ5 121 aa10.15□□□□□ -0.78
CLCN6-201ENST00000312413 SMIM26A0A096LP01 95 aa10.15□□□□□ -0.79
CLCN6-201ENST00000312413 SMIM11BQ8TCY0 68 aa10.15□□□□□ -0.79
CLCN6-201ENST00000312413 SYCNQ0VAF6 134 aa10.14□□□□□ -0.79
CLCN6-201ENST00000312413 RNASE3P12724 160 aaKnown RBP10.14□□□□□ -0.79
CLCN6-201ENST00000312413 WFDC13Q8IUB5 93 aa10.14□□□□□ -0.79
CLCN6-201ENST00000312413 POLR2KP53803 58 aaKnown RBP10.14□□□□□ -0.79
CLCN6-201ENST00000312413 LINC00694P0DN24 101 aa10.13□□□□□ -0.79
CLCN6-201ENST00000312413 FAM19A5Q7Z5A7 132 aaPredicted RBP10.13□□□□□ -0.79
CLCN6-201ENST00000312413 FSTL3O95633 263 aa10.13□□□□□ -0.79
CLCN6-201ENST00000312413 LY6LH3BQJ8 138 aa10.13□□□□□ -0.79
CLCN6-201ENST00000312413 Q8N9L7 120 aa10.13□□□□□ -0.79
CLCN6-201ENST00000312413 NUP210Q8TEM1 1887 aaPredicted RBP10.13□□□□□ -0.79
CLCN6-201ENST00000312413 MRPS36P82909 103 aaKnown RBP10.12□□□□□ -0.79
CLCN6-201ENST00000312413 CLUHP3Q96NS8 147 aa10.12□□□□□ -0.79
CLCN6-201ENST00000312413 SERP1Q9Y6X1 66 aa10.12□□□□□ -0.79
CLCN6-201ENST00000312413 CD164L2Q6UWJ8 174 aa10.12□□□□□ -0.79
CLCN6-201ENST00000312413 UBE2D4Q9Y2X8 147 aa10.12□□□□□ -0.79
CLCN6-201ENST00000312413 LRCOL1A6NCL2 159 aa10.12□□□□□ -0.79
CLCN6-201ENST00000312413 DHRS4-AS1Q9P1J3 65 aa10.11□□□□□ -0.79
CLCN6-201ENST00000312413 C11orf21Q9P2W6 132 aa10.11□□□□□ -0.79
CLCN6-201ENST00000312413 M0R378 163 aa10.11□□□□□ -0.79
CLCN6-201ENST00000312413 Q6YL49 198 aa10.1□□□□□ -0.79
CLCN6-201ENST00000312413 C9orf85Q96MD7 179 aa10.1□□□□□ -0.79
CLCN6-201ENST00000312413 Q8NA96 180 aa10.1□□□□□ -0.79
CLCN6-201ENST00000312413 IGKV2-28A0A075B6P5 120 aa10.1□□□□□ -0.79
CLCN6-201ENST00000312413 DEFB131BA0A096LNP1 70 aa10.1□□□□□ -0.79
CLCN6-201ENST00000312413 IGKV2D-28P01615 120 aa10.1□□□□□ -0.79
CLCN6-201ENST00000312413 MIFP14174 115 aa10.1□□□□□ -0.79
CLCN6-201ENST00000312413 M0QXV9 152 aa10.1□□□□□ -0.79
CLCN6-201ENST00000312413 MED12LQ86YW9 2145 aa10.1□□□□□ -0.79
CLCN6-201ENST00000312413 GAS8-AS1O95177 125 aa10.09□□□□□ -0.79
CLCN6-201ENST00000312413 UBE2D1P51668 147 aa10.09□□□□□ -0.79
CLCN6-201ENST00000312413 HRCT1Q6UXD1 115 aa10.09□□□□□ -0.79
CLCN6-201ENST00000312413 POM121L12Q8N7R1 296 aa10.09□□□□□ -0.79
CLCN6-201ENST00000312413 LINC00310P59036 64 aa10.09□□□□□ -0.79
CLCN6-201ENST00000312413 PRR9Q5T870 116 aa10.09□□□□□ -0.79
CLCN6-201ENST00000312413 PTPN13Q12923 2485 aa10.09□□□□□ -0.79
CLCN6-201ENST00000312413 KLLNB2CW77 178 aa10.08□□□□□ -0.8
CLCN6-201ENST00000312413 MYO18BQ8IUG5 2567 aa10.08□□□□□ -0.8
CLCN6-201ENST00000312413 LINC00959A0A1B0GUT2 108 aa10.08□□□□□ -0.8
CLCN6-201ENST00000312413 CNFNQ9BYD5 112 aa10.08□□□□□ -0.8
CLCN6-201ENST00000312413 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.08□□□□□ -0.8
CLCN6-201ENST00000312413 TRAV7A0A075B6U4 112 aa10.07□□□□□ -0.8
CLCN6-201ENST00000312413 BBC3Q96PG8 261 aaPredicted RBP10.07□□□□□ -0.8
CLCN6-201ENST00000312413 ZNF73O43830 326 aaPredicted RBP10.06□□□□□ -0.8
CLCN6-201ENST00000312413 COX17Q14061 63 aa10.06□□□□□ -0.8
CLCN6-201ENST00000312413 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
CLCN6-201ENST00000312413 NTM-AS1Q6ZSK4 140 aa10.06□□□□□ -0.8
CLCN6-201ENST00000312413 LINC00526Q96FQ7 95 aa10.06□□□□□ -0.8
CLCN6-201ENST00000312413 C22orf34Q6ZV56 151 aa10.06□□□□□ -0.8
CLCN6-201ENST00000312413 IGIPA6NJ69 53 aa10.05□□□□□ -0.8
CLCN6-201ENST00000312413 FAM30AQ9NZY2 134 aa10.05□□□□□ -0.8
CLCN6-201ENST00000312413 IGHV4-30-4P0DP06 118 aa10.05□□□□□ -0.8
CLCN6-201ENST00000312413 IGHV4-31P0DP07 118 aa10.05□□□□□ -0.8
CLCN6-201ENST00000312413 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.05□□□□□ -0.8
CLCN6-201ENST00000312413 SPINK6Q6UWN8 80 aa10.05□□□□□ -0.8
CLCN6-201ENST00000312413 MUC7Q8TAX7 377 aa10.04□□□□□ -0.8
CLCN6-201ENST00000312413 PPDPFQ9H3Y8 114 aa10.04□□□□□ -0.8
CLCN6-201ENST00000312413 URB1-AS1Q96HZ7 61 aa10.04□□□□□ -0.8
CLCN6-201ENST00000312413 HILS1P60008 231 aa10.04□□□□□ -0.8
CLCN6-201ENST00000312413 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
CLCN6-201ENST00000312413 PMAIP1Q13794 54 aa10.03□□□□□ -0.8
CLCN6-201ENST00000312413 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.03□□□□□ -0.8
CLCN6-201ENST00000312413 TTC28Q96AY4 2481 aa10.03□□□□□ -0.8
CLCN6-201ENST00000312413 Q8IZM0 81 aa10.03□□□□□ -0.8
CLCN6-201ENST00000312413 MUC6Q6W4X9 2439 aa10.03□□□□□ -0.8
CLCN6-201ENST00000312413 C10orf99Q6UWK7 81 aa10.03□□□□□ -0.8
CLCN6-201ENST00000312413 LINC00482Q8N8I6 264 aa10.03□□□□□ -0.8
CLCN6-201ENST00000312413 CELA1Q9UNI1 258 aa10.02□□□□□ -0.81
CLCN6-201ENST00000312413 LOC100131303A0A0U1RQF7 123 aa10.02□□□□□ -0.81
CLCN6-201ENST00000312413 Q8N6K4 173 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms