RNA–Protein interactions for RNA: ENST00000311659.4

UBQLN3-201, Transcript of ubiquilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN3, Length 2,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-201ENST00000311659 TRBV7-7A0A0K0K1E9 115 aa6.17□□□□□ -1.42
UBQLN3-201ENST00000311659 NPC2P61916 151 aa6.17□□□□□ -1.42
UBQLN3-201ENST00000311659 Q9UF83 564 aa6.17□□□□□ -1.42
UBQLN3-201ENST00000311659 MSMBP08118 114 aa6.17□□□□□ -1.42
UBQLN3-201ENST00000311659 IGLV5-45A0A087WSX0 123 aa6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 A0A096LNT2 108 aa6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 IGHV3-73A0A0B4J1V6 119 aa6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 B4DSR2 109 aa6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 WIPF1O43516 503 aa6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 MAPK1IP1LQ8NDC0 245 aa6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 DUX3Q96PT4 197 aa6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 CITED2Q99967 270 aaPredicted RBP6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 PPDPFQ9H3Y8 114 aa6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 NDUFA1O15239 70 aa6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 C10orf99Q6UWK7 81 aa6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 Q6ZSN1 163 aa6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 KRTAP1-3Q8IUG1 177 aa6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 Q96MF0 132 aa6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 CSDC2Q9Y534 153 aaKnown RBP6.16□□□□□ -1.42
UBQLN3-201ENST00000311659 CR1P17927 2039 aa6.15□□□□□ -1.42
UBQLN3-201ENST00000311659 TRAV25A0A0B4J276 109 aa6.15□□□□□ -1.42
UBQLN3-201ENST00000311659 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.15□□□□□ -1.42
UBQLN3-201ENST00000311659 CDKN2A-AS1Q9UH64 79 aa6.15□□□□□ -1.42
UBQLN3-201ENST00000311659 A8MTW9 85 aa6.15□□□□□ -1.43
UBQLN3-201ENST00000311659 PIK3CD-AS1Q5SR53 167 aa6.15□□□□□ -1.43
UBQLN3-201ENST00000311659 DAND5Q8N907 189 aa6.15□□□□□ -1.43
UBQLN3-201ENST00000311659 LINC00467Q9BRT7 94 aa6.15□□□□□ -1.43
UBQLN3-201ENST00000311659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.14□□□□□ -1.43
UBQLN3-201ENST00000311659 MAP1AP78559 2803 aaPredicted RBP6.14□□□□□ -1.43
UBQLN3-201ENST00000311659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.14□□□□□ -1.43
UBQLN3-201ENST00000311659 IGKV2-29A2NJV5 120 aaPredicted RBP6.14□□□□□ -1.43
UBQLN3-201ENST00000311659 TIRAPP58753 221 aa6.14□□□□□ -1.43
UBQLN3-201ENST00000311659 LINC01356Q8N9X3 169 aa6.14□□□□□ -1.43
UBQLN3-201ENST00000311659 SORL1Q92673 2214 aa6.14□□□□□ -1.43
UBQLN3-201ENST00000311659 TMEM89A2RUT3 159 aa6.14□□□□□ -1.43
UBQLN3-201ENST00000311659 KNCNA6PVL3 124 aa6.14□□□□□ -1.43
UBQLN3-201ENST00000311659 TMEM101Q96IK0 257 aa6.14□□□□□ -1.43
UBQLN3-201ENST00000311659 IGLV5-39A0A0G2JS06 123 aa6.13□□□□□ -1.43
UBQLN3-201ENST00000311659 AVPP01185 164 aa6.13□□□□□ -1.43
UBQLN3-201ENST00000311659 SYNJ2BPP57105 145 aa6.13□□□□□ -1.43
UBQLN3-201ENST00000311659 LINC00308Q8TCZ7 52 aa6.13□□□□□ -1.43
UBQLN3-201ENST00000311659 RBMY1BA6NDE4 496 aaKnown RBP6.13□□□□□ -1.43
UBQLN3-201ENST00000311659 RBMY1EA6NEQ0 496 aaKnown RBP6.13□□□□□ -1.43
UBQLN3-201ENST00000311659 COX7A2LO14548 114 aa6.13□□□□□ -1.43
UBQLN3-201ENST00000311659 PRM2P04554 102 aa6.13□□□□□ -1.43
UBQLN3-201ENST00000311659 RBMY1DP0C7P1 496 aaKnown RBP6.13□□□□□ -1.43
UBQLN3-201ENST00000311659 BEAN1Q3B7T3 259 aa6.13□□□□□ -1.43
UBQLN3-201ENST00000311659 SDIM1Q6ZPB5 146 aa6.13□□□□□ -1.43
UBQLN3-201ENST00000311659 WFDC11Q8NEX6 87 aa6.13□□□□□ -1.43
UBQLN3-201ENST00000311659 TMEM126AQ9H061 195 aa6.13□□□□□ -1.43
UBQLN3-201ENST00000311659 IGHV3-53P01767 116 aa6.12□□□□□ -1.43
UBQLN3-201ENST00000311659 ACYP1P07311 99 aa6.12□□□□□ -1.43
UBQLN3-201ENST00000311659 IGHV4-31P0DP07 118 aa6.12□□□□□ -1.43
UBQLN3-201ENST00000311659 COX6A2Q02221 97 aa6.12□□□□□ -1.43
UBQLN3-201ENST00000311659 MEIG1Q5JSS6 88 aa6.12□□□□□ -1.43
UBQLN3-201ENST00000311659 CHCHD5Q9BSY4 110 aa6.12□□□□□ -1.43
UBQLN3-201ENST00000311659 IMUPQ9GZP8 106 aa6.12□□□□□ -1.43
UBQLN3-201ENST00000311659 HTN1P15515 57 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 SOSTDC1Q6X4U4 206 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 C11orf72Q8NBR9 251 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 SMCR5Q8TEV8 140 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 DNAJC30Q96LL9 226 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 LINC01587Q99440 93 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 PDZD2O15018 2839 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 IGHV3OR16-12A0A075B7B8 117 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 IGHV3-38A0A0C4DH36 116 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 ZNF415Q09FC8 603 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 FAM19A3Q7Z5A8 133 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 Q8N2B8 174 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 DUX5Q96PT3 197 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 Q9H8V8 135 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 C22orf24Q9Y442 160 aa6.11□□□□□ -1.43
UBQLN3-201ENST00000311659 J3QLI3 93 aa6.1□□□□□ -1.43
UBQLN3-201ENST00000311659 IGHV4-59P01825 116 aa6.1□□□□□ -1.43
UBQLN3-201ENST00000311659 HOXD3P31249 432 aaPredicted RBP6.1□□□□□ -1.43
UBQLN3-201ENST00000311659 CIRBPQ14011 172 aaKnown RBP6.1□□□□□ -1.43
UBQLN3-201ENST00000311659 LINC00242Q5T6M2 205 aa6.1□□□□□ -1.43
UBQLN3-201ENST00000311659 ITPR2Q14571 2701 aa6.1□□□□□ -1.43
UBQLN3-201ENST00000311659 HECTD1Q9ULT8 2610 aa6.1□□□□□ -1.43
UBQLN3-201ENST00000311659 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.43
UBQLN3-201ENST00000311659 TRACP01848 142 aa6.09□□□□□ -1.43
UBQLN3-201ENST00000311659 DEFB131AP59861 70 aa6.09□□□□□ -1.43
UBQLN3-201ENST00000311659 HERVK_113P63121 156 aa6.09□□□□□ -1.43
UBQLN3-201ENST00000311659 KRTAP21-3Q3LHN1 58 aa6.09□□□□□ -1.43
UBQLN3-201ENST00000311659 ZNF625Q96I27 306 aaPredicted RBP6.09□□□□□ -1.43
UBQLN3-201ENST00000311659 CCDC168Q8NDH2 2452 aa6.09□□□□□ -1.43
UBQLN3-201ENST00000311659 CREBBPQ92793 2442 aa6.09□□□□□ -1.43
UBQLN3-201ENST00000311659 FAM236AA0A1B0GUQ0 79 aa6.09□□□□□ -1.43
UBQLN3-201ENST00000311659 FAM236BA0A1B0GV22 79 aa6.09□□□□□ -1.43
UBQLN3-201ENST00000311659 SMIM9A6NGZ8 99 aa6.09□□□□□ -1.43
UBQLN3-201ENST00000311659 RS1O15537 224 aa6.09□□□□□ -1.43
UBQLN3-201ENST00000311659 LINC00643Q86TS7 51 aa6.09□□□□□ -1.43
UBQLN3-201ENST00000311659 DAZ2Q13117 558 aaKnown RBP6.08□□□□□ -1.44
UBQLN3-201ENST00000311659 DEFB112Q30KQ8 113 aa6.08□□□□□ -1.44
UBQLN3-201ENST00000311659 DAZ4Q86SG3 579 aaKnown RBP6.08□□□□□ -1.44
UBQLN3-201ENST00000311659 DAZ3Q9NR90 486 aaKnown RBP6.08□□□□□ -1.44
UBQLN3-201ENST00000311659 ZNF469Q96JG9 3925 aaPredicted RBP6.08□□□□□ -1.44
UBQLN3-201ENST00000311659 CSPG4Q6UVK1 2322 aa6.08□□□□□ -1.44
UBQLN3-201ENST00000311659 ZANQ9Y493 2812 aa6.08□□□□□ -1.44
UBQLN3-201ENST00000311659 FAM222AQ5U5X8 452 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms