RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 K7EMI3 77 aa11.72□□□□□ -0.53
CCS-201ENST00000310190 SNAPINO95295 136 aa11.72□□□□□ -0.53
CCS-201ENST00000310190 HLA-DQA1P01909 254 aa11.72□□□□□ -0.53
CCS-201ENST00000310190 C14orf177Q52M58 125 aa11.72□□□□□ -0.53
CCS-201ENST00000310190 CDC42SE2Q9NRR3 84 aa11.72□□□□□ -0.53
CCS-201ENST00000310190 OR5A1Q8NGJ0 315 aa11.71□□□□□ -0.53
CCS-201ENST00000310190 BAALCQ8WXS3 180 aa11.71□□□□□ -0.53
CCS-201ENST00000310190 TMEM18Q96B42 140 aa11.71□□□□□ -0.53
CCS-201ENST00000310190 TMEM101Q96IK0 257 aa11.71□□□□□ -0.53
CCS-201ENST00000310190 RPS10P5Q9NQ39 176 aa11.71□□□□□ -0.53
CCS-201ENST00000310190 CCL25O15444 150 aa11.7□□□□□ -0.54
CCS-201ENST00000310190 APOC3P02656 99 aa11.7□□□□□ -0.54
CCS-201ENST00000310190 MT-ND6P03923 174 aa11.7□□□□□ -0.54
CCS-201ENST00000310190 UBE2D4Q9Y2X8 147 aa11.7□□□□□ -0.54
CCS-201ENST00000310190 RNASEKQ6P5S7 137 aaKnown RBP11.69□□□□□ -0.54
CCS-201ENST00000310190 ZNF664Q8N3J9 261 aa11.68□□□□□ -0.54
CCS-201ENST00000310190 Q8N8P6 123 aa11.68□□□□□ -0.54
CCS-201ENST00000310190 MAP1LC3AQ9H492 121 aa11.68□□□□□ -0.54
CCS-201ENST00000310190 GCSHP23434 173 aa11.67□□□□□ -0.54
CCS-201ENST00000310190 MRPS36P82909 103 aaKnown RBP11.67□□□□□ -0.54
CCS-201ENST00000310190 CLPSL2Q6UWE3 100 aa11.67□□□□□ -0.54
CCS-201ENST00000310190 SPANXA1Q9NS26 97 aa11.67□□□□□ -0.54
CCS-201ENST00000310190 PYGO1Q9Y3Y4 419 aa11.67□□□□□ -0.54
CCS-201ENST00000310190 IGLV5-52A0A0A0MRZ9 124 aa11.66□□□□□ -0.54
CCS-201ENST00000310190 NXT2Q9NPJ8 142 aaKnown RBP11.66□□□□□ -0.54
CCS-201ENST00000310190 LINC00959A0A1B0GUT2 108 aa11.65□□□□□ -0.54
CCS-201ENST00000310190 LINC01546A6NGU7 62 aa11.65□□□□□ -0.54
CCS-201ENST00000310190 USP17L23D6RBM5 183 aa11.65□□□□□ -0.54
CCS-201ENST00000310190 NPSP0C0P6 89 aa11.65□□□□□ -0.54
CCS-201ENST00000310190 RAB5AP20339 215 aa11.65□□□□□ -0.54
CCS-201ENST00000310190 DGAT2L7PQ6IED9 249 aa11.65□□□□□ -0.54
CCS-201ENST00000310190 FAM104AQ969W3 186 aa11.65□□□□□ -0.54
CCS-201ENST00000310190 KRTAP10-1P60331 282 aa11.64□□□□□ -0.55
CCS-201ENST00000310190 YPEL4Q96NS1 127 aa11.64□□□□□ -0.55
CCS-201ENST00000310190 IGLV10-54A0A075B6I4 117 aa11.63□□□□□ -0.55
CCS-201ENST00000310190 LECT2O14960 151 aa11.63□□□□□ -0.55
CCS-201ENST00000310190 ORMDL2Q53FV1 153 aa11.63□□□□□ -0.55
CCS-201ENST00000310190 CHCHD10Q8WYQ3 142 aaPredicted RBP11.63□□□□□ -0.55
CCS-201ENST00000310190 ALKBH7Q9BT30 221 aaPredicted RBP11.63□□□□□ -0.55
CCS-201ENST00000310190 PRSS1P07477 247 aa11.62□□□□□ -0.55
CCS-201ENST00000310190 C1orf196B1AJZ1 125 aa11.61□□□□□ -0.55
CCS-201ENST00000310190 G0S2P27469 103 aa11.61□□□□□ -0.55
CCS-201ENST00000310190 CNBPP62633 177 aaKnown RBP11.61□□□□□ -0.55
CCS-201ENST00000310190 RPL39P62891 51 aaKnown RBP11.61□□□□□ -0.55
CCS-201ENST00000310190 FOXI1Q12951 378 aa11.61□□□□□ -0.55
CCS-201ENST00000310190 CFAP161Q6P656 301 aa11.61□□□□□ -0.55
CCS-201ENST00000310190 Q6ZSA8 131 aa11.61□□□□□ -0.55
CCS-201ENST00000310190 GAGE12HA6NDE8 117 aa11.6□□□□□ -0.55
CCS-201ENST00000310190 SS18Q15532 418 aa11.6□□□□□ -0.55
CCS-201ENST00000310190 CD164L2Q6UWJ8 174 aa11.6□□□□□ -0.55
CCS-201ENST00000310190 MRPL18Q9H0U6 180 aaKnown RBP11.6□□□□□ -0.55
CCS-201ENST00000310190 LINC01549A6NIU2 74 aa11.59□□□□□ -0.55
CCS-201ENST00000310190 FUSP35637 526 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCS-201ENST00000310190 KIAA1644Q3SXP7 199 aa11.59□□□□□ -0.55
CCS-201ENST00000310190 Q6ZUT4 128 aa11.59□□□□□ -0.55
CCS-201ENST00000310190 TGIF2-C20orf24A0A0A6YYL0 155 aa11.58□□□□□ -0.56
CCS-201ENST00000310190 LOC389332A0A1B0GUA5 103 aa11.58□□□□□ -0.56
CCS-201ENST00000310190 IFI27P40305 119 aaPredicted RBP11.58□□□□□ -0.56
CCS-201ENST00000310190 XGP55808 180 aa11.58□□□□□ -0.56
CCS-201ENST00000310190 SLC7A5P1Q8MH63 180 aa11.58□□□□□ -0.56
CCS-201ENST00000310190 C15orf56Q8N910 161 aa11.58□□□□□ -0.56
CCS-201ENST00000310190 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.57□□□□□ -0.56
CCS-201ENST00000310190 GVQW2A0A096LPI5 108 aaPredicted RBP11.57□□□□□ -0.56
CCS-201ENST00000310190 C9orf163Q8N9P6 203 aa11.57□□□□□ -0.56
CCS-201ENST00000310190 CYSLTR1Q9Y271 337 aa11.57□□□□□ -0.56
CCS-201ENST00000310190 FABP9Q0Z7S8 132 aa11.56□□□□□ -0.56
CCS-201ENST00000310190 C2orf66Q6UXQ4 117 aa11.56□□□□□ -0.56
CCS-201ENST00000310190 IGLV4-3A0A075B6K6 122 aa11.55□□□□□ -0.56
CCS-201ENST00000310190 IGKV3OR2-268A0A0C4DH90 116 aa11.55□□□□□ -0.56
CCS-201ENST00000310190 IGIPA6NJ69 53 aa11.55□□□□□ -0.56
CCS-201ENST00000310190 SMCO4Q9NRQ5 59 aa11.55□□□□□ -0.56
CCS-201ENST00000310190 XCL1P47992 114 aa11.54□□□□□ -0.56
CCS-201ENST00000310190 TOMM6Q96B49 74 aa11.54□□□□□ -0.56
CCS-201ENST00000310190 AMELXQ99217 191 aa11.54□□□□□ -0.56
CCS-201ENST00000310190 TRAPPC1Q9Y5R8 145 aa11.54□□□□□ -0.56
CCS-201ENST00000310190 FAT1Q14517 4588 aa11.53□□□□□ -0.56
CCS-201ENST00000310190 IGHV1-58A0A0C4DH39 117 aa11.53□□□□□ -0.56
CCS-201ENST00000310190 FAM19A3Q7Z5A8 133 aa11.53□□□□□ -0.56
CCS-201ENST00000310190 PRSS3P2Q8NHM4 247 aa11.53□□□□□ -0.56
CCS-201ENST00000310190 TMEM141Q96I45 108 aa11.53□□□□□ -0.56
CCS-201ENST00000310190 TIMM17AQ99595 171 aa11.53□□□□□ -0.56
CCS-201ENST00000310190 IGHV3OR16-9A0A0B4J2B5 98 aa11.52□□□□□ -0.57
CCS-201ENST00000310190 hDV102S1A0JD36 115 aa11.52□□□□□ -0.57
CCS-201ENST00000310190 SLPIP03973 132 aa11.52□□□□□ -0.57
CCS-201ENST00000310190 OPRPNQ99935 248 aaPredicted RBP11.52□□□□□ -0.57
CCS-201ENST00000310190 VPS13BQ7Z7G8 4022 aa11.52□□□□□ -0.57
CCS-201ENST00000310190 RNASE13Q5GAN3 156 aaKnown RBP11.51□□□□□ -0.57
CCS-201ENST00000310190 PAPPA-AS1Q5QFB9 102 aa11.51□□□□□ -0.57
CCS-201ENST00000310190 Q8N1X5 172 aa11.51□□□□□ -0.57
CCS-201ENST00000310190 AP5S1Q9NUS5 200 aa11.51□□□□□ -0.57
CCS-201ENST00000310190 FAM30AQ9NZY2 134 aa11.51□□□□□ -0.57
CCS-201ENST00000310190 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.5□□□□□ -0.57
CCS-201ENST00000310190 TRAV13-1A0A0B4J241 112 aa11.5□□□□□ -0.57
CCS-201ENST00000310190 COX7A2LO14548 114 aa11.5□□□□□ -0.57
CCS-201ENST00000310190 SDIM1Q6ZPB5 146 aa11.5□□□□□ -0.57
CCS-201ENST00000310190 LINC00173Q6ZV60 143 aa11.5□□□□□ -0.57
CCS-201ENST00000310190 ERASQ7Z444 233 aa11.5□□□□□ -0.57
CCS-201ENST00000310190 C18orf32Q8TCD1 76 aa11.5□□□□□ -0.57
CCS-201ENST00000310190 IFITM10A6NMD0 228 aa11.49□□□□□ -0.57
CCS-201ENST00000310190 LINC01561Q8N1V8 128 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms