RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 GCSHP23434 173 aa13.13□□□□□ -0.31
VEGFB-201ENST00000309422 MRPL52Q86TS9 123 aaKnown RBP13.13□□□□□ -0.31
VEGFB-201ENST00000309422 MT-ND6P03923 174 aa13.11□□□□□ -0.31
VEGFB-201ENST00000309422 LOC389332A0A1B0GUA5 103 aa13.09□□□□□ -0.31
VEGFB-201ENST00000309422 USP17L23D6RBM5 183 aa13.09□□□□□ -0.31
VEGFB-201ENST00000309422 SS18Q15532 418 aa13.09□□□□□ -0.31
VEGFB-201ENST00000309422 CFAP161Q6P656 301 aa13.09□□□□□ -0.31
VEGFB-201ENST00000309422 ZNF664Q8N3J9 261 aa13.09□□□□□ -0.31
VEGFB-201ENST00000309422 MAPKAPK5-AS1Q8N8E1 139 aa13.09□□□□□ -0.31
VEGFB-201ENST00000309422 GNB1LQ9BYB4 327 aa13.09□□□□□ -0.31
VEGFB-201ENST00000309422 CDK2AP2O75956 126 aa13.08□□□□□ -0.31
VEGFB-201ENST00000309422 FUSP35637 526 aaKnown RBP eCLIP13.08□□□□□ -0.31
VEGFB-201ENST00000309422 WFDC2Q14508 124 aa13.08□□□□□ -0.31
VEGFB-201ENST00000309422 CSDC2Q9Y534 153 aaKnown RBP13.08□□□□□ -0.31
VEGFB-201ENST00000309422 CHCHD10Q8WYQ3 142 aaPredicted RBP13.07□□□□□ -0.32
VEGFB-201ENST00000309422 NXT2Q9NPJ8 142 aaKnown RBP13.07□□□□□ -0.32
VEGFB-201ENST00000309422 SPANXA1Q9NS26 97 aa13.07□□□□□ -0.32
VEGFB-201ENST00000309422 AP5S1Q9NUS5 200 aa13.07□□□□□ -0.32
VEGFB-201ENST00000309422 UBE2D4Q9Y2X8 147 aa13.07□□□□□ -0.32
VEGFB-201ENST00000309422 GAGE12HA6NDE8 117 aa13.07□□□□□ -0.32
VEGFB-201ENST00000309422 K7EMI3 77 aa13.07□□□□□ -0.32
VEGFB-201ENST00000309422 G0S2P27469 103 aa13.07□□□□□ -0.32
VEGFB-201ENST00000309422 IFI27P40305 119 aaPredicted RBP13.07□□□□□ -0.32
VEGFB-201ENST00000309422 ORMDL2Q53FV1 153 aa13.07□□□□□ -0.32
VEGFB-201ENST00000309422 TIMM21Q9BVV7 248 aa13.07□□□□□ -0.32
VEGFB-201ENST00000309422 CDC42SE2Q9NRR3 84 aa13.07□□□□□ -0.32
VEGFB-201ENST00000309422 Q8N8P6 123 aa13.06□□□□□ -0.32
VEGFB-201ENST00000309422 LRP1BQ9NZR2 4599 aa13.05□□□□□ -0.32
VEGFB-201ENST00000309422 CCL25O15444 150 aa13.05□□□□□ -0.32
VEGFB-201ENST00000309422 XCL1P47992 114 aa13.05□□□□□ -0.32
VEGFB-201ENST00000309422 hDV102S1A0JD36 115 aa13.04□□□□□ -0.32
VEGFB-201ENST00000309422 DNAH5Q8TE73 4624 aa13.03□□□□□ -0.32
VEGFB-201ENST00000309422 LINC00959A0A1B0GUT2 108 aa13.03□□□□□ -0.32
VEGFB-201ENST00000309422 PRSS47A8MTI9 375 aa13.03□□□□□ -0.32
VEGFB-201ENST00000309422 C1orf196B1AJZ1 125 aa13.03□□□□□ -0.32
VEGFB-201ENST00000309422 FABP9Q0Z7S8 132 aa13.03□□□□□ -0.32
VEGFB-201ENST00000309422 CYSLTR1Q9Y271 337 aa13.03□□□□□ -0.32
VEGFB-201ENST00000309422 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.02□□□□□ -0.33
VEGFB-201ENST00000309422 RPL39P62891 51 aaKnown RBP13.02□□□□□ -0.33
VEGFB-201ENST00000309422 KIAA1644Q3SXP7 199 aa13.02□□□□□ -0.33
VEGFB-201ENST00000309422 Q6ZN92 141 aa13.02□□□□□ -0.33
VEGFB-201ENST00000309422 Q6ZUT4 128 aa13.02□□□□□ -0.33
VEGFB-201ENST00000309422 PRSS3P2Q8NHM4 247 aa13.02□□□□□ -0.33
VEGFB-201ENST00000309422 MRPL18Q9H0U6 180 aaKnown RBP13.02□□□□□ -0.33
VEGFB-201ENST00000309422 TRAV13-1A0A0B4J241 112 aa13.01□□□□□ -0.33
VEGFB-201ENST00000309422 MALP21145 153 aa13□□□□□ -0.33
VEGFB-201ENST00000309422 KRTAP10-1P60331 282 aa13□□□□□ -0.33
VEGFB-201ENST00000309422 KRTAP26-1Q6PEX3 210 aa13□□□□□ -0.33
VEGFB-201ENST00000309422 SMCO4Q9NRQ5 59 aa13□□□□□ -0.33
VEGFB-201ENST00000309422 RNASE13Q5GAN3 156 aaKnown RBP12.99□□□□□ -0.33
VEGFB-201ENST00000309422 CD164L2Q6UWJ8 174 aa12.99□□□□□ -0.33
VEGFB-201ENST00000309422 C2orf88Q9BSF0 95 aa12.99□□□□□ -0.33
VEGFB-201ENST00000309422 TRAPPC1Q9Y5R8 145 aa12.99□□□□□ -0.33
VEGFB-201ENST00000309422 TGIF2-C20orf24A0A0A6YYL0 155 aa12.98□□□□□ -0.33
VEGFB-201ENST00000309422 IFITM10A6NMD0 228 aa12.98□□□□□ -0.33
VEGFB-201ENST00000309422 MRPS36P82909 103 aaKnown RBP12.98□□□□□ -0.33
VEGFB-201ENST00000309422 PRSS1P07477 247 aa12.97□□□□□ -0.33
VEGFB-201ENST00000309422 PAPPA-AS1Q5QFB9 102 aa12.97□□□□□ -0.33
VEGFB-201ENST00000309422 C2orf66Q6UXQ4 117 aa12.97□□□□□ -0.33
VEGFB-201ENST00000309422 FA2HQ7L5A8 372 aa12.97□□□□□ -0.33
VEGFB-201ENST00000309422 PYGO1Q9Y3Y4 419 aa12.96□□□□□ -0.33
VEGFB-201ENST00000309422 IGHV1-58A0A0C4DH39 117 aa12.95□□□□□ -0.34
VEGFB-201ENST00000309422 LINC01549A6NIU2 74 aa12.95□□□□□ -0.34
VEGFB-201ENST00000309422 COX7A2LO14548 114 aa12.95□□□□□ -0.34
VEGFB-201ENST00000309422 FOXI1Q12951 378 aa12.95□□□□□ -0.34
VEGFB-201ENST00000309422 TEX43Q6ZNM6 134 aa12.95□□□□□ -0.34
VEGFB-201ENST00000309422 TMEM141Q96I45 108 aa12.95□□□□□ -0.34
VEGFB-201ENST00000309422 APOMO95445 188 aa12.94□□□□□ -0.34
VEGFB-201ENST00000309422 ALKBH7Q9BT30 221 aaPredicted RBP12.94□□□□□ -0.34
VEGFB-201ENST00000309422 PKIGQ9Y2B9 76 aa12.94□□□□□ -0.34
VEGFB-201ENST00000309422 KIAA1109Q2LD37 5005 aa12.94□□□□□ -0.34
VEGFB-201ENST00000309422 ZNF561-AS1K7EIQ3 104 aa12.94□□□□□ -0.34
VEGFB-201ENST00000309422 HIGD2BQ4VC39 106 aa12.94□□□□□ -0.34
VEGFB-201ENST00000309422 SLC7A5P1Q8MH63 180 aa12.94□□□□□ -0.34
VEGFB-201ENST00000309422 NPSP0C0P6 89 aa12.93□□□□□ -0.34
VEGFB-201ENST00000309422 CNBPP62633 177 aaKnown RBP12.93□□□□□ -0.34
VEGFB-201ENST00000309422 GVQW2A0A096LPI5 108 aaPredicted RBP12.92□□□□□ -0.34
VEGFB-201ENST00000309422 C15orf56Q8N910 161 aa12.92□□□□□ -0.34
VEGFB-201ENST00000309422 VCX2Q9H322 139 aa12.92□□□□□ -0.34
VEGFB-201ENST00000309422 APOBP04114 4563 aaKnown RBP12.91□□□□□ -0.34
VEGFB-201ENST00000309422 IGLV4-3A0A075B6K6 122 aa12.91□□□□□ -0.34
VEGFB-201ENST00000309422 LINC01620Q4KN68 170 aa12.91□□□□□ -0.34
VEGFB-201ENST00000309422 IGHV3-64A0A075B6Q5 118 aa12.9□□□□□ -0.34
VEGFB-201ENST00000309422 RAB5BP61020 215 aa12.9□□□□□ -0.34
VEGFB-201ENST00000309422 OPRPNQ99935 248 aaPredicted RBP12.9□□□□□ -0.34
VEGFB-201ENST00000309422 HERC2O95714 4834 aa12.89□□□□□ -0.35
VEGFB-201ENST00000309422 C9orf163Q8N9P6 203 aa12.89□□□□□ -0.35
VEGFB-201ENST00000309422 SCGB3A1Q96QR1 104 aa12.88□□□□□ -0.35
VEGFB-201ENST00000309422 TIMM17AQ99595 171 aa12.88□□□□□ -0.35
VEGFB-201ENST00000309422 HSPG2P98160 4391 aa12.88□□□□□ -0.35
VEGFB-201ENST00000309422 C5orf38Q86SI9 138 aa12.87□□□□□ -0.35
VEGFB-201ENST00000309422 CBLN2Q8IUK8 224 aa12.87□□□□□ -0.35
VEGFB-201ENST00000309422 TOMM6Q96B49 74 aa12.87□□□□□ -0.35
VEGFB-201ENST00000309422 RYR1P21817 5038 aa12.87□□□□□ -0.35
VEGFB-201ENST00000309422 SEC11AP67812 179 aa12.86□□□□□ -0.35
VEGFB-201ENST00000309422 ERASQ7Z444 233 aa12.85□□□□□ -0.35
VEGFB-201ENST00000309422 Q8N1X5 172 aa12.85□□□□□ -0.35
VEGFB-201ENST00000309422 CARD19Q96LW7 228 aa12.85□□□□□ -0.35
VEGFB-201ENST00000309422 XGP55808 180 aa12.84□□□□□ -0.35
VEGFB-201ENST00000309422 Q6ZSA8 131 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms