RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 RS1O15537 224 aa10.56□□□□□ -0.72
SCUBE2-201ENST00000309263 IGHV3-53P01767 116 aa10.56□□□□□ -0.72
SCUBE2-201ENST00000309263 APRG1Q8IVJ8 170 aa10.56□□□□□ -0.72
SCUBE2-201ENST00000309263 LINC01587Q99440 93 aa10.55□□□□□ -0.72
SCUBE2-201ENST00000309263 TRBV30A0A0K0K1B3 111 aa10.55□□□□□ -0.72
SCUBE2-201ENST00000309263 HIST2H2BCQ6DN03 193 aa10.55□□□□□ -0.72
SCUBE2-201ENST00000309263 KMT2BQ9UMN6 2715 aaPredicted RBP10.55□□□□□ -0.72
SCUBE2-201ENST00000309263 IGHV4-30-2A0A087WSY4 118 aa10.55□□□□□ -0.72
SCUBE2-201ENST00000309263 C19orf54Q5BKX5 351 aa10.55□□□□□ -0.72
SCUBE2-201ENST00000309263 LINC00467Q9BRT7 94 aa10.54□□□□□ -0.72
SCUBE2-201ENST00000309263 Q9H8V8 135 aa10.54□□□□□ -0.72
SCUBE2-201ENST00000309263 NDUFA7O95182 113 aa10.54□□□□□ -0.72
SCUBE2-201ENST00000309263 Q6ZSN1 163 aa10.54□□□□□ -0.72
SCUBE2-201ENST00000309263 AVPP01185 164 aa10.54□□□□□ -0.72
SCUBE2-201ENST00000309263 HERV-K104P63124 156 aa10.54□□□□□ -0.72
SCUBE2-201ENST00000309263 CIRBPQ14011 172 aaKnown RBP10.54□□□□□ -0.72
SCUBE2-201ENST00000309263 TRBV7-9A0A0J9YWB2 115 aa10.53□□□□□ -0.72
SCUBE2-201ENST00000309263 MIAQ16674 131 aa10.53□□□□□ -0.72
SCUBE2-201ENST00000309263 VSIG2Q96IQ7 327 aa10.53□□□□□ -0.72
SCUBE2-201ENST00000309263 A6NDX4 124 aa10.53□□□□□ -0.72
SCUBE2-201ENST00000309263 SVIPQ8NHG7 77 aa10.53□□□□□ -0.72
SCUBE2-201ENST00000309263 RBMY1A1P0DJD3 496 aaKnown RBP10.53□□□□□ -0.72
SCUBE2-201ENST00000309263 RBMY1CP0DJD4 496 aa10.53□□□□□ -0.72
SCUBE2-201ENST00000309263 HOXD3P31249 432 aaPredicted RBP10.53□□□□□ -0.72
SCUBE2-201ENST00000309263 RBMY1FQ15415 496 aaKnown RBP10.53□□□□□ -0.72
SCUBE2-201ENST00000309263 UBE2E2Q96LR5 201 aa10.52□□□□□ -0.73
SCUBE2-201ENST00000309263 FAM236AA0A1B0GUQ0 79 aa10.51□□□□□ -0.73
SCUBE2-201ENST00000309263 FAM236BA0A1B0GV22 79 aa10.51□□□□□ -0.73
SCUBE2-201ENST00000309263 CFHR3Q02985 330 aa10.51□□□□□ -0.73
SCUBE2-201ENST00000309263 KLK9Q2XQG4 91 aa10.51□□□□□ -0.73
SCUBE2-201ENST00000309263 TMEM61Q8N0U2 210 aa10.51□□□□□ -0.73
SCUBE2-201ENST00000309263 LITAFQ99732 161 aa10.51□□□□□ -0.73
SCUBE2-201ENST00000309263 TOMM7Q9P0U1 55 aa10.51□□□□□ -0.73
SCUBE2-201ENST00000309263 K7EQG2 157 aa10.51□□□□□ -0.73
SCUBE2-201ENST00000309263 PRIMA1Q86XR5 153 aa10.5□□□□□ -0.73
SCUBE2-201ENST00000309263 MRPS36P82909 103 aaKnown RBP10.5□□□□□ -0.73
SCUBE2-201ENST00000309263 DEFB112Q30KQ8 113 aa10.5□□□□□ -0.73
SCUBE2-201ENST00000309263 IGLV1-40P01703 118 aa10.5□□□□□ -0.73
SCUBE2-201ENST00000309263 MSMBP08118 114 aa10.5□□□□□ -0.73
SCUBE2-201ENST00000309263 XCL2Q9UBD3 114 aa10.5□□□□□ -0.73
SCUBE2-201ENST00000309263 SLURP1P55000 103 aa10.49□□□□□ -0.73
SCUBE2-201ENST00000309263 YAE1D1Q9NRH1 226 aa10.49□□□□□ -0.73
SCUBE2-201ENST00000309263 H3BUA1 57 aa10.49□□□□□ -0.73
SCUBE2-201ENST00000309263 J3QKU1 62 aa10.48□□□□□ -0.73
SCUBE2-201ENST00000309263 K7EMT4 169 aa10.48□□□□□ -0.73
SCUBE2-201ENST00000309263 LST1O00453 97 aa10.48□□□□□ -0.73
SCUBE2-201ENST00000309263 Q9HAA7 133 aa10.48□□□□□ -0.73
SCUBE2-201ENST00000309263 H3BT86 120 aa10.48□□□□□ -0.73
SCUBE2-201ENST00000309263 COX6A2Q02221 97 aa10.48□□□□□ -0.73
SCUBE2-201ENST00000309263 C18orf65Q6ZTR6 163 aa10.48□□□□□ -0.73
SCUBE2-201ENST00000309263 TMEM101Q96IK0 257 aa10.47□□□□□ -0.73
SCUBE2-201ENST00000309263 UBE2D4Q9Y2X8 147 aa10.47□□□□□ -0.73
SCUBE2-201ENST00000309263 GAGE2AQ6NT46 116 aa10.47□□□□□ -0.73
SCUBE2-201ENST00000309263 PIK3CD-AS1Q5SR53 167 aa10.47□□□□□ -0.73
SCUBE2-201ENST00000309263 TRGV1A0A0A0MS02 117 aa10.46□□□□□ -0.73
SCUBE2-201ENST00000309263 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.46□□□□□ -0.73
SCUBE2-201ENST00000309263 PSMB8P28062 276 aa10.46□□□□□ -0.73
SCUBE2-201ENST00000309263 SHISA2Q6UWI4 295 aa10.46□□□□□ -0.73
SCUBE2-201ENST00000309263 Q8N2B8 174 aa10.46□□□□□ -0.73
SCUBE2-201ENST00000309263 DYNLRB2Q8TF09 96 aa10.46□□□□□ -0.74
SCUBE2-201ENST00000309263 SETXQ7Z333 2677 aaKnown RBP10.46□□□□□ -0.74
SCUBE2-201ENST00000309263 TINCRA0A1B0GVN0 87 aa10.45□□□□□ -0.74
SCUBE2-201ENST00000309263 PLA2G2AP14555 144 aa10.45□□□□□ -0.74
SCUBE2-201ENST00000309263 CHCHD7Q9BUK0 85 aa10.45□□□□□ -0.74
SCUBE2-201ENST00000309263 ZNF415Q09FC8 603 aa10.45□□□□□ -0.74
SCUBE2-201ENST00000309263 LINC00308Q8TCZ7 52 aa10.45□□□□□ -0.74
SCUBE2-201ENST00000309263 FAM104AQ969W3 186 aa10.45□□□□□ -0.74
SCUBE2-201ENST00000309263 DAZ2Q13117 558 aaKnown RBP10.44□□□□□ -0.74
SCUBE2-201ENST00000309263 DAZ4Q86SG3 579 aaKnown RBP10.44□□□□□ -0.74
SCUBE2-201ENST00000309263 SPANXDQ9BXN6 97 aa10.44□□□□□ -0.74
SCUBE2-201ENST00000309263 DAZ3Q9NR90 486 aaKnown RBP10.44□□□□□ -0.74
SCUBE2-201ENST00000309263 SPANXCQ9NY87 97 aa10.44□□□□□ -0.74
SCUBE2-201ENST00000309263 BAALC-AS2P0C853 105 aa10.44□□□□□ -0.74
SCUBE2-201ENST00000309263 C10orf105Q8TEF2 133 aa10.44□□□□□ -0.74
SCUBE2-201ENST00000309263 C11orf68Q9H3H3 251 aaKnown RBP10.44□□□□□ -0.74
SCUBE2-201ENST00000309263 PYGO1Q9Y3Y4 419 aa10.44□□□□□ -0.74
SCUBE2-201ENST00000309263 SPANXA1Q9NS26 97 aa10.44□□□□□ -0.74
SCUBE2-201ENST00000309263 CITED2Q99967 270 aaPredicted RBP10.43□□□□□ -0.74
SCUBE2-201ENST00000309263 LINC00694P0DN24 101 aa10.43□□□□□ -0.74
SCUBE2-201ENST00000309263 NOTCH1P46531 2555 aa10.42□□□□□ -0.74
SCUBE2-201ENST00000309263 C9orf153Q5TBE3 101 aa10.42□□□□□ -0.74
SCUBE2-201ENST00000309263 MGAM2Q2M2H8 2515 aa10.42□□□□□ -0.74
SCUBE2-201ENST00000309263 B4DSR2 109 aa10.41□□□□□ -0.74
SCUBE2-201ENST00000309263 RBMY1BA6NDE4 496 aaKnown RBP10.41□□□□□ -0.74
SCUBE2-201ENST00000309263 RBMY1EA6NEQ0 496 aaKnown RBP10.41□□□□□ -0.74
SCUBE2-201ENST00000309263 RBMY1DP0C7P1 496 aaKnown RBP10.41□□□□□ -0.74
SCUBE2-201ENST00000309263 OR13C6PQ8NH95 151 aa10.4□□□□□ -0.74
SCUBE2-201ENST00000309263 M0QXV9 152 aa10.4□□□□□ -0.74
SCUBE2-201ENST00000309263 DNAL4O96015 105 aa10.4□□□□□ -0.75
SCUBE2-201ENST00000309263 UNC79Q9P2D8 2635 aa10.39□□□□□ -0.75
SCUBE2-201ENST00000309263 APCP25054 2843 aa10.39□□□□□ -0.75
SCUBE2-201ENST00000309263 HIVEP1P15822 2718 aa10.39□□□□□ -0.75
SCUBE2-201ENST00000309263 UBE2L6O14933 153 aa10.39□□□□□ -0.75
SCUBE2-201ENST00000309263 Q6Q795 121 aa10.39□□□□□ -0.75
SCUBE2-201ENST00000309263 SOSTDC1Q6X4U4 206 aa10.39□□□□□ -0.75
SCUBE2-201ENST00000309263 COX7A2LO14548 114 aa10.38□□□□□ -0.75
SCUBE2-201ENST00000309263 PFN2P35080 140 aa10.38□□□□□ -0.75
SCUBE2-201ENST00000309263 LINC00242Q5T6M2 205 aa10.38□□□□□ -0.75
SCUBE2-201ENST00000309263 EDA2RQ9HAV5 297 aa10.38□□□□□ -0.75
SCUBE2-201ENST00000309263 MAST4O15021 2626 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms