RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 GAGE12FP0CL80 117 aa13.36□□□□□ -0.27
RNF139-201ENST00000303545 GAGE12GP0CL81 117 aa13.36□□□□□ -0.27
RNF139-201ENST00000303545 GAGE12IP0CL82 117 aa13.36□□□□□ -0.27
RNF139-201ENST00000303545 HILS1P60008 231 aa13.36□□□□□ -0.27
RNF139-201ENST00000303545 TEX48A0A1B0GUV7 120 aa13.35□□□□□ -0.27
RNF139-201ENST00000303545 IGLV1-51P01701 117 aa13.35□□□□□ -0.27
RNF139-201ENST00000303545 SH2D6Q7Z4S9 175 aa13.35□□□□□ -0.27
RNF139-201ENST00000303545 TMEM263Q8WUH6 116 aaKnown RBP13.35□□□□□ -0.27
RNF139-201ENST00000303545 DNAJC30Q96LL9 226 aa13.35□□□□□ -0.27
RNF139-201ENST00000303545 DGAT2L7PQ6IED9 249 aa13.35□□□□□ -0.27
RNF139-201ENST00000303545 SPANXB1Q9NS25 103 aaPredicted RBP13.35□□□□□ -0.27
RNF139-201ENST00000303545 H7C2G1 150 aa13.34□□□□□ -0.27
RNF139-201ENST00000303545 NPC2P61916 151 aa13.34□□□□□ -0.27
RNF139-201ENST00000303545 MUSTN1Q8IVN3 82 aa13.34□□□□□ -0.27
RNF139-201ENST00000303545 SPANXA1Q9NS26 97 aa13.34□□□□□ -0.27
RNF139-201ENST00000303545 C19orf73Q9NVV2 129 aa13.34□□□□□ -0.27
RNF139-201ENST00000303545 LOC100131303A0A0U1RQF7 123 aa13.34□□□□□ -0.27
RNF139-201ENST00000303545 A4D1N5 150 aa13.34□□□□□ -0.27
RNF139-201ENST00000303545 PSMB2P49721 201 aa13.34□□□□□ -0.27
RNF139-201ENST00000303545 A0A0J9YXY3 114 aa13.33□□□□□ -0.28
RNF139-201ENST00000303545 CIDEAO60543 219 aa13.33□□□□□ -0.28
RNF139-201ENST00000303545 K7EQD1 137 aa13.33□□□□□ -0.28
RNF139-201ENST00000303545 TRGV2A0A075B6R0 118 aa13.32□□□□□ -0.28
RNF139-201ENST00000303545 EIF4EBP3O60516 100 aaPredicted RBP13.32□□□□□ -0.28
RNF139-201ENST00000303545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.32□□□□□ -0.28
RNF139-201ENST00000303545 GEMIN7Q9H840 131 aaKnown RBP13.32□□□□□ -0.28
RNF139-201ENST00000303545 COX6A2Q02221 97 aa13.32□□□□□ -0.28
RNF139-201ENST00000303545 NTM-AS1Q6ZSK4 140 aa13.32□□□□□ -0.28
RNF139-201ENST00000303545 CDKN2A-AS1Q9UH64 79 aa13.32□□□□□ -0.28
RNF139-201ENST00000303545 ETDBQ3ZM63 59 aa13.31□□□□□ -0.28
RNF139-201ENST00000303545 TINCRA0A1B0GVN0 87 aa13.31□□□□□ -0.28
RNF139-201ENST00000303545 PLAC8L1A1L4L8 177 aa13.31□□□□□ -0.28
RNF139-201ENST00000303545 RPL36AP83881 106 aaKnown RBP13.31□□□□□ -0.28
RNF139-201ENST00000303545 RPL36ALQ969Q0 106 aaKnown RBP13.31□□□□□ -0.28
RNF139-201ENST00000303545 TENM1Q9UKZ4 2725 aa13.31□□□□□ -0.28
RNF139-201ENST00000303545 IGHV1-58A0A0C4DH39 117 aa13.3□□□□□ -0.28
RNF139-201ENST00000303545 LY6G6DO95868 133 aa13.3□□□□□ -0.28
RNF139-201ENST00000303545 PRSS2P07478 247 aa13.3□□□□□ -0.28
RNF139-201ENST00000303545 NDUFA12Q9UI09 145 aa13.3□□□□□ -0.28
RNF139-201ENST00000303545 TRAV4A0A0B4J268 109 aa13.29□□□□□ -0.28
RNF139-201ENST00000303545 ADAMTSL4-AS1Q5T5F5 129 aa13.29□□□□□ -0.28
RNF139-201ENST00000303545 SPATA3Q8NHX4 192 aa13.29□□□□□ -0.28
RNF139-201ENST00000303545 TRAV13-1A0A0B4J241 112 aa13.29□□□□□ -0.28
RNF139-201ENST00000303545 VSIG2Q96IQ7 327 aa13.29□□□□□ -0.28
RNF139-201ENST00000303545 PF4P02776 101 aa13.28□□□□□ -0.28
RNF139-201ENST00000303545 GTSF1LQ9H1H1 148 aa13.28□□□□□ -0.28
RNF139-201ENST00000303545 F8W1H4 67 aa13.28□□□□□ -0.28
RNF139-201ENST00000303545 DAND5Q8N907 189 aa13.28□□□□□ -0.28
RNF139-201ENST00000303545 CSNK1G2-AS1Q8NCQ2 148 aa13.27□□□□□ -0.28
RNF139-201ENST00000303545 PRO1854Q9UHT4 67 aa13.27□□□□□ -0.28
RNF139-201ENST00000303545 PRO0461Q9UI25 63 aa13.27□□□□□ -0.28
RNF139-201ENST00000303545 CRYBA4P53673 196 aa13.27□□□□□ -0.29
RNF139-201ENST00000303545 C16orf74Q96GX8 76 aa13.26□□□□□ -0.29
RNF139-201ENST00000303545 UBE2D3P61077 147 aa13.26□□□□□ -0.29
RNF139-201ENST00000303545 UBE2D2P62837 147 aa13.26□□□□□ -0.29
RNF139-201ENST00000303545 LITAFQ99732 161 aa13.26□□□□□ -0.29
RNF139-201ENST00000303545 SCGB1C2P0DMR2 95 aa13.26□□□□□ -0.29
RNF139-201ENST00000303545 ZNF625Q96I27 306 aaPredicted RBP13.26□□□□□ -0.29
RNF139-201ENST00000303545 A0A0U1RRA0 63 aa13.25□□□□□ -0.29
RNF139-201ENST00000303545 TCL1BO95988 128 aa13.25□□□□□ -0.29
RNF139-201ENST00000303545 INSL3P51460 131 aa13.25□□□□□ -0.29
RNF139-201ENST00000303545 DAZ2Q13117 558 aaKnown RBP13.25□□□□□ -0.29
RNF139-201ENST00000303545 SMAGPQ0VAQ4 97 aa13.25□□□□□ -0.29
RNF139-201ENST00000303545 TRGV4A0A0C4DH28 118 aa13.24□□□□□ -0.29
RNF139-201ENST00000303545 INAFM1C9JVW0 142 aa13.24□□□□□ -0.29
RNF139-201ENST00000303545 TMEM101Q96IK0 257 aa13.24□□□□□ -0.29
RNF139-201ENST00000303545 SIGMAR1Q99720 223 aa13.24□□□□□ -0.29
RNF139-201ENST00000303545 DEFB130BP0DP73 79 aa13.24□□□□□ -0.29
RNF139-201ENST00000303545 DEFB130AP0DP74 79 aa13.24□□□□□ -0.29
RNF139-201ENST00000303545 CMC4P56277 68 aaPredicted RBP13.24□□□□□ -0.29
RNF139-201ENST00000303545 LINC00242Q5T6M2 205 aa13.24□□□□□ -0.29
RNF139-201ENST00000303545 IGKV3OR2-268A0A0C4DH90 116 aa13.23□□□□□ -0.29
RNF139-201ENST00000303545 SMCPP49901 116 aaPredicted RBP13.23□□□□□ -0.29
RNF139-201ENST00000303545 TRBV10-1A0A0K0K1A3 114 aa13.23□□□□□ -0.29
RNF139-201ENST00000303545 Q1RN00 199 aa13.23□□□□□ -0.29
RNF139-201ENST00000303545 DAZ4Q86SG3 579 aaKnown RBP13.23□□□□□ -0.29
RNF139-201ENST00000303545 DAZ3Q9NR90 486 aaKnown RBP13.23□□□□□ -0.29
RNF139-201ENST00000303545 NSD1Q96L73 2696 aaPredicted RBP13.22□□□□□ -0.29
RNF139-201ENST00000303545 C1QTNF4Q9BXJ3 329 aa13.22□□□□□ -0.29
RNF139-201ENST00000303545 TRRAPQ9Y4A5 3859 aa13.21□□□□□ -0.29
RNF139-201ENST00000303545 GAGE12HA6NDE8 117 aa13.21□□□□□ -0.29
RNF139-201ENST00000303545 IGHV3-33P01772 117 aa13.21□□□□□ -0.29
RNF139-201ENST00000303545 UBE2L6O14933 153 aa13.21□□□□□ -0.3
RNF139-201ENST00000303545 SCGB1A1P11684 91 aa13.21□□□□□ -0.3
RNF139-201ENST00000303545 CRLF1O75462 422 aa13.2□□□□□ -0.3
RNF139-201ENST00000303545 LINC00482Q8N8I6 264 aa13.2□□□□□ -0.3
RNF139-201ENST00000303545 GAGE6Q13070 117 aa13.2□□□□□ -0.3
RNF139-201ENST00000303545 SBSPONQ8IVN8 264 aa13.2□□□□□ -0.3
RNF139-201ENST00000303545 ERG28Q9UKR5 140 aa13.2□□□□□ -0.3
RNF139-201ENST00000303545 ZFAND6Q6FIF0 208 aa13.19□□□□□ -0.3
RNF139-201ENST00000303545 TIRAPP58753 221 aa13.19□□□□□ -0.3
RNF139-201ENST00000303545 CDC42SE2Q9NRR3 84 aa13.19□□□□□ -0.3
RNF139-201ENST00000303545 ATRQ13535 2644 aa13.19□□□□□ -0.3
RNF139-201ENST00000303545 HIVEP1P15822 2718 aa13.18□□□□□ -0.3
RNF139-201ENST00000303545 FAM110AQ9BQ89 295 aa13.18□□□□□ -0.3
RNF139-201ENST00000303545 TMEM243Q9BU79 118 aa13.18□□□□□ -0.3
RNF139-201ENST00000303545 Q9H8V8 135 aa13.18□□□□□ -0.3
RNF139-201ENST00000303545 FHL2Q14192 279 aa13.17□□□□□ -0.3
RNF139-201ENST00000303545 HERVK_113P63121 156 aa13.17□□□□□ -0.3
RNF139-201ENST00000303545 OVOL2Q9BRP0 275 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms