RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 UBE2D3P61077 147 aa10.31□□□□□ -0.76
SHCBP1-201ENST00000303383 DAD1P61803 113 aa10.31□□□□□ -0.76
SHCBP1-201ENST00000303383 UBE2D2P62837 147 aa10.31□□□□□ -0.76
SHCBP1-201ENST00000303383 SMIM20Q8N5G0 67 aa10.31□□□□□ -0.76
SHCBP1-201ENST00000303383 PYGO1Q9Y3Y4 419 aa10.31□□□□□ -0.76
SHCBP1-201ENST00000303383 FHL2Q14192 279 aa10.3□□□□□ -0.76
SHCBP1-201ENST00000303383 GEMIN7Q9H840 131 aaKnown RBP10.3□□□□□ -0.76
SHCBP1-201ENST00000303383 LOC100131303A0A0U1RQF7 123 aa10.3□□□□□ -0.76
SHCBP1-201ENST00000303383 TRRAPQ9Y4A5 3859 aa10.3□□□□□ -0.76
SHCBP1-201ENST00000303383 IGKV2D-26A0A0A0MRZ7 120 aa10.3□□□□□ -0.76
SHCBP1-201ENST00000303383 C11orf86A6NJI1 115 aa10.3□□□□□ -0.76
SHCBP1-201ENST00000303383 KRTAP10-11P60412 298 aa10.3□□□□□ -0.76
SHCBP1-201ENST00000303383 AMMECR1LQ6DCA0 310 aa10.3□□□□□ -0.76
SHCBP1-201ENST00000303383 FBN1P35555 2871 aaKnown RBP10.29□□□□□ -0.76
SHCBP1-201ENST00000303383 RNASE13Q5GAN3 156 aaKnown RBP10.29□□□□□ -0.76
SHCBP1-201ENST00000303383 RNF183Q96D59 192 aa10.29□□□□□ -0.76
SHCBP1-201ENST00000303383 CHAC1Q9BUX1 264 aa10.29□□□□□ -0.76
SHCBP1-201ENST00000303383 UBE2D4Q9Y2X8 147 aa10.28□□□□□ -0.76
SHCBP1-201ENST00000303383 MPV17L2Q567V2 206 aa10.28□□□□□ -0.76
SHCBP1-201ENST00000303383 TTTY13Q9BZ97 58 aa10.28□□□□□ -0.76
SHCBP1-201ENST00000303383 TRBV25-1A0A075B6N4 114 aa10.27□□□□□ -0.76
SHCBP1-201ENST00000303383 TMEM243Q9BU79 118 aa10.27□□□□□ -0.76
SHCBP1-201ENST00000303383 IGLV4-69A0A075B6H9 119 aa10.27□□□□□ -0.77
SHCBP1-201ENST00000303383 SPART-AS1P0CW21 52 aa10.27□□□□□ -0.77
SHCBP1-201ENST00000303383 FGF6P10767 208 aa10.27□□□□□ -0.77
SHCBP1-201ENST00000303383 GYPEP15421 78 aa10.27□□□□□ -0.77
SHCBP1-201ENST00000303383 PRO0255Q9UI72 69 aa10.27□□□□□ -0.77
SHCBP1-201ENST00000303383 EGFEM1PQ0D2K5 195 aa10.26□□□□□ -0.77
SHCBP1-201ENST00000303383 LINC00612Q8N6U2 182 aa10.26□□□□□ -0.77
SHCBP1-201ENST00000303383 A0A0J9YXV3 536 aa10.26□□□□□ -0.77
SHCBP1-201ENST00000303383 HTN3P15516 51 aa10.26□□□□□ -0.77
SHCBP1-201ENST00000303383 TMEM101Q96IK0 257 aa10.26□□□□□ -0.77
SHCBP1-201ENST00000303383 SIGMAR1Q99720 223 aa10.26□□□□□ -0.77
SHCBP1-201ENST00000303383 PAX4O43316 350 aa10.26□□□□□ -0.77
SHCBP1-201ENST00000303383 Q6ZUT4 128 aa10.26□□□□□ -0.77
SHCBP1-201ENST00000303383 E9PLD3 99 aa10.25□□□□□ -0.77
SHCBP1-201ENST00000303383 Q8NAQ8 132 aa10.25□□□□□ -0.77
SHCBP1-201ENST00000303383 OR5A1Q8NGJ0 315 aa10.25□□□□□ -0.77
SHCBP1-201ENST00000303383 ATP5G1P05496 136 aa10.24□□□□□ -0.77
SHCBP1-201ENST00000303383 CHCHD5Q9BSY4 110 aa10.24□□□□□ -0.77
SHCBP1-201ENST00000303383 NTM-AS1Q6ZSK4 140 aa10.24□□□□□ -0.77
SHCBP1-201ENST00000303383 C2orf91Q6ZV80 131 aa10.24□□□□□ -0.77
SHCBP1-201ENST00000303383 F5H768 121 aa10.24□□□□□ -0.77
SHCBP1-201ENST00000303383 ATP6V0E2Q8NHE4 81 aa10.24□□□□□ -0.77
SHCBP1-201ENST00000303383 AMELXQ99217 191 aa10.24□□□□□ -0.77
SHCBP1-201ENST00000303383 NFE4Q86UQ8 179 aa10.23□□□□□ -0.77
SHCBP1-201ENST00000303383 TIMM21Q9BVV7 248 aa10.23□□□□□ -0.77
SHCBP1-201ENST00000303383 A0A0J9YY99 117 aa10.23□□□□□ -0.77
SHCBP1-201ENST00000303383 SCGB1D4Q6XE38 83 aa10.23□□□□□ -0.77
SHCBP1-201ENST00000303383 ZNF815PA8K554 130 aa10.22□□□□□ -0.77
SHCBP1-201ENST00000303383 LINC00694P0DN24 101 aa10.22□□□□□ -0.77
SHCBP1-201ENST00000303383 CELA1Q9UNI1 258 aa10.22□□□□□ -0.77
SHCBP1-201ENST00000303383 LGALS3P17931 250 aaKnown RBP10.22□□□□□ -0.77
SHCBP1-201ENST00000303383 HSD52Q0P140 79 aa10.22□□□□□ -0.77
SHCBP1-201ENST00000303383 IGHV3-64A0A075B6Q5 118 aa10.21□□□□□ -0.77
SHCBP1-201ENST00000303383 A0A096LPF7 62 aa10.21□□□□□ -0.77
SHCBP1-201ENST00000303383 MYMXA0A1B0GTQ4 84 aa10.21□□□□□ -0.77
SHCBP1-201ENST00000303383 MRPS36P82909 103 aaKnown RBP10.21□□□□□ -0.77
SHCBP1-201ENST00000303383 GAGE6Q13070 117 aa10.21□□□□□ -0.77
SHCBP1-201ENST00000303383 TEX48A0A1B0GUV7 120 aa10.21□□□□□ -0.77
SHCBP1-201ENST00000303383 BVES-AS1Q5T3Y7 98 aa10.21□□□□□ -0.77
SHCBP1-201ENST00000303383 RETNQ9HD89 108 aa10.21□□□□□ -0.77
SHCBP1-201ENST00000303383 TRBV6-8A0A0A6YYG3 113 aa10.21□□□□□ -0.78
SHCBP1-201ENST00000303383 MAPKAPK5-AS1Q8N8E1 139 aa10.21□□□□□ -0.78
SHCBP1-201ENST00000303383 A8MZ25 164 aa10.2□□□□□ -0.78
SHCBP1-201ENST00000303383 ZNF22P17026 224 aaPredicted RBP10.2□□□□□ -0.78
SHCBP1-201ENST00000303383 TRAV13-1A0A0B4J241 112 aa10.2□□□□□ -0.78
SHCBP1-201ENST00000303383 TMEM262E9PQX1 116 aa10.19□□□□□ -0.78
SHCBP1-201ENST00000303383 C5orf47Q569G3 176 aa10.19□□□□□ -0.78
SHCBP1-201ENST00000303383 MTURNQ8N3F0 131 aa10.19□□□□□ -0.78
SHCBP1-201ENST00000303383 HIGD1BQ9P298 99 aa10.19□□□□□ -0.78
SHCBP1-201ENST00000303383 GCSHP23434 173 aa10.19□□□□□ -0.78
SHCBP1-201ENST00000303383 TINCRA0A1B0GVN0 87 aa10.19□□□□□ -0.78
SHCBP1-201ENST00000303383 H7C423 109 aa10.19□□□□□ -0.78
SHCBP1-201ENST00000303383 CSDC2Q9Y534 153 aaKnown RBP10.19□□□□□ -0.78
SHCBP1-201ENST00000303383 J3QQQ9 107 aa10.18□□□□□ -0.78
SHCBP1-201ENST00000303383 SEC11AP67812 179 aa10.18□□□□□ -0.78
SHCBP1-201ENST00000303383 HIST1H4GQ99525 98 aa10.18□□□□□ -0.78
SHCBP1-201ENST00000303383 IGKV3OR2-268A0A0C4DH90 116 aa10.18□□□□□ -0.78
SHCBP1-201ENST00000303383 TMEM223A0PJW6 202 aa10.18□□□□□ -0.78
SHCBP1-201ENST00000303383 H3BRM9 83 aa10.18□□□□□ -0.78
SHCBP1-201ENST00000303383 DEFB121Q5J5C9 76 aa10.17□□□□□ -0.78
SHCBP1-201ENST00000303383 SAMD5Q5TGI4 173 aa10.17□□□□□ -0.78
SHCBP1-201ENST00000303383 SBSPONQ8IVN8 264 aa10.17□□□□□ -0.78
SHCBP1-201ENST00000303383 FAM104AQ969W3 186 aa10.17□□□□□ -0.78
SHCBP1-201ENST00000303383 PLEKHB2Q96CS7 222 aa10.17□□□□□ -0.78
SHCBP1-201ENST00000303383 NOTCH1P46531 2555 aa10.17□□□□□ -0.78
SHCBP1-201ENST00000303383 A6NDN8 102 aa10.17□□□□□ -0.78
SHCBP1-201ENST00000303383 PKD1L1Q8TDX9 2849 aa10.17□□□□□ -0.78
SHCBP1-201ENST00000303383 LEPROTO15243 131 aa10.17□□□□□ -0.78
SHCBP1-201ENST00000303383 PRB2P02812 416 aaPredicted RBP10.17□□□□□ -0.78
SHCBP1-201ENST00000303383 UBE2D1P51668 147 aa10.17□□□□□ -0.78
SHCBP1-201ENST00000303383 CDC42SE2Q9NRR3 84 aa10.16□□□□□ -0.78
SHCBP1-201ENST00000303383 HERVK_113P63121 156 aa10.16□□□□□ -0.78
SHCBP1-201ENST00000303383 SRSF9Q13242 221 aaKnown RBP eCLIP10.16□□□□□ -0.78
SHCBP1-201ENST00000303383 MRPL23Q16540 153 aaKnown RBP10.15□□□□□ -0.78
SHCBP1-201ENST00000303383 SPINK8P0C7L1 97 aa10.15□□□□□ -0.79
SHCBP1-201ENST00000303383 VSIG2Q96IQ7 327 aa10.14□□□□□ -0.79
SHCBP1-201ENST00000303383 ICOSQ9Y6W8 199 aa10.14□□□□□ -0.79
SHCBP1-201ENST00000303383 TIRAPP58753 221 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms