RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 DEFB114Q30KQ6 69 aa7.76□□□□□ -1.17
CLIP1-201ENST00000302528 Q6Q795 121 aa7.76□□□□□ -1.17
CLIP1-201ENST00000302528 OBSL1O75147 1896 aa7.76□□□□□ -1.17
CLIP1-201ENST00000302528 ESRGQ1W209 222 aa7.76□□□□□ -1.17
CLIP1-201ENST00000302528 C22orf34Q6ZV56 151 aa7.76□□□□□ -1.17
CLIP1-201ENST00000302528 GOLGB1Q14789 3259 aaKnown RBP7.76□□□□□ -1.17
CLIP1-201ENST00000302528 KIAA1549LQ6ZVL6 1849 aa7.76□□□□□ -1.17
CLIP1-201ENST00000302528 LINC00526Q96FQ7 95 aa7.76□□□□□ -1.17
CLIP1-201ENST00000302528 TRBV6-4A0A1B0GX49 114 aa7.75□□□□□ -1.17
CLIP1-201ENST00000302528 CELA1Q9UNI1 258 aa7.75□□□□□ -1.17
CLIP1-201ENST00000302528 TNFRSF13BO14836 293 aaPredicted RBP7.75□□□□□ -1.17
CLIP1-201ENST00000302528 PLA2G2EQ9NZK7 142 aa7.75□□□□□ -1.17
CLIP1-201ENST00000302528 CFAP126Q5VTH2 177 aa7.75□□□□□ -1.17
CLIP1-201ENST00000302528 SHISA2Q6UWI4 295 aa7.75□□□□□ -1.17
CLIP1-201ENST00000302528 COX7CP15954 63 aa7.75□□□□□ -1.17
CLIP1-201ENST00000302528 EBI3Q14213 229 aa7.75□□□□□ -1.17
CLIP1-201ENST00000302528 IMUPQ9GZP8 106 aa7.75□□□□□ -1.17
CLIP1-201ENST00000302528 SMIM26A0A096LP01 95 aa7.74□□□□□ -1.17
CLIP1-201ENST00000302528 K7EQG2 157 aa7.74□□□□□ -1.17
CLIP1-201ENST00000302528 C10orf25Q5T742 122 aa7.74□□□□□ -1.17
CLIP1-201ENST00000302528 IGFL2Q6UWQ7 119 aa7.74□□□□□ -1.17
CLIP1-201ENST00000302528 BBC3Q96PG8 261 aaPredicted RBP7.74□□□□□ -1.17
CLIP1-201ENST00000302528 DSCAML1Q8TD84 2053 aa7.74□□□□□ -1.17
CLIP1-201ENST00000302528 A0A1B0GXF2 115 aa7.74□□□□□ -1.17
CLIP1-201ENST00000302528 CD164L2Q6UWJ8 174 aa7.74□□□□□ -1.17
CLIP1-201ENST00000302528 MED13LQ71F56 2210 aa7.74□□□□□ -1.17
CLIP1-201ENST00000302528 RBX1P62877 108 aa7.74□□□□□ -1.17
CLIP1-201ENST00000302528 SPINK1P00995 79 aa7.73□□□□□ -1.17
CLIP1-201ENST00000302528 LINC00208Q96KT6 92 aa7.73□□□□□ -1.17
CLIP1-201ENST00000302528 LINC00474Q9P2X8 69 aa7.73□□□□□ -1.17
CLIP1-201ENST00000302528 ZNF73O43830 326 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-201ENST00000302528 MED13Q9UHV7 2174 aa7.72□□□□□ -1.17
CLIP1-201ENST00000302528 KIF26AQ9ULI4 1882 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-201ENST00000302528 INAFM1C9JVW0 142 aa7.72□□□□□ -1.17
CLIP1-201ENST00000302528 SOSTDC1Q6X4U4 206 aa7.72□□□□□ -1.17
CLIP1-201ENST00000302528 NANOS2P60321 138 aaKnown RBP7.72□□□□□ -1.17
CLIP1-201ENST00000302528 KRTAP27-1Q3LI81 207 aa7.72□□□□□ -1.17
CLIP1-201ENST00000302528 KPRPQ5T749 579 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-201ENST00000302528 MAPKAPK5-AS1Q8N8E1 139 aa7.72□□□□□ -1.17
CLIP1-201ENST00000302528 RETNLBQ9BQ08 111 aa7.72□□□□□ -1.17
CLIP1-201ENST00000302528 NCKAP5O14513 1909 aa7.72□□□□□ -1.17
CLIP1-201ENST00000302528 M0QY20 66 aa7.71□□□□□ -1.17
CLIP1-201ENST00000302528 CIRBP-AS1Q8TBR5 109 aa7.71□□□□□ -1.17
CLIP1-201ENST00000302528 A8MZ25 164 aa7.71□□□□□ -1.17
CLIP1-201ENST00000302528 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.71□□□□□ -1.17
CLIP1-201ENST00000302528 Q6YL49 198 aa7.71□□□□□ -1.17
CLIP1-201ENST00000302528 LST1O00453 97 aa7.71□□□□□ -1.18
CLIP1-201ENST00000302528 IGF1P05019 195 aa7.71□□□□□ -1.18
CLIP1-201ENST00000302528 MRPS36P82909 103 aaKnown RBP7.71□□□□□ -1.18
CLIP1-201ENST00000302528 SMIM11BQ8TCY0 68 aa7.71□□□□□ -1.18
CLIP1-201ENST00000302528 PROK1P58294 105 aa7.71□□□□□ -1.18
CLIP1-201ENST00000302528 LOC100131303A0A0U1RQF7 123 aa7.7□□□□□ -1.18
CLIP1-201ENST00000302528 CCDC179H3BU77 68 aa7.7□□□□□ -1.18
CLIP1-201ENST00000302528 LRRC75A-AS1Q8N1F1 130 aa7.7□□□□□ -1.18
CLIP1-201ENST00000302528 RPL28P46779 137 aaKnown RBP7.7□□□□□ -1.18
CLIP1-201ENST00000302528 IGHV6-1A0A0B4J1U7 121 aa7.7□□□□□ -1.18
CLIP1-201ENST00000302528 LELP1Q5T871 98 aa7.69□□□□□ -1.18
CLIP1-201ENST00000302528 GPR179Q6PRD1 2367 aa7.69□□□□□ -1.18
CLIP1-201ENST00000302528 GDF5OSQ5U4N7 250 aa7.69□□□□□ -1.18
CLIP1-201ENST00000302528 LINC00959A0A1B0GUT2 108 aa7.68□□□□□ -1.18
CLIP1-201ENST00000302528 Q6JHZ5 121 aa7.68□□□□□ -1.18
CLIP1-201ENST00000302528 Q6ZSR3 168 aa7.68□□□□□ -1.18
CLIP1-201ENST00000302528 CLUHP3Q96NS8 147 aa7.68□□□□□ -1.18
CLIP1-201ENST00000302528 IGLV2-14P01704 120 aa7.68□□□□□ -1.18
CLIP1-201ENST00000302528 PYGO1Q9Y3Y4 419 aa7.68□□□□□ -1.18
CLIP1-201ENST00000302528 DENND4AQ7Z401 1863 aa7.68□□□□□ -1.18
CLIP1-201ENST00000302528 PCOTHQ58A44 107 aa7.68□□□□□ -1.18
CLIP1-201ENST00000302528 TP73-AS1Q9UF72 201 aa7.68□□□□□ -1.18
CLIP1-201ENST00000302528 ODF3BA8MYP8 253 aa7.67□□□□□ -1.18
CLIP1-201ENST00000302528 NUPR2A6NF83 97 aa7.67□□□□□ -1.18
CLIP1-201ENST00000302528 IGLV2-8P01709 118 aa7.67□□□□□ -1.18
CLIP1-201ENST00000302528 LINC00694P0DN24 101 aa7.67□□□□□ -1.18
CLIP1-201ENST00000302528 COX17Q14061 63 aa7.67□□□□□ -1.18
CLIP1-201ENST00000302528 IGF2-ASQ6U949 168 aa7.67□□□□□ -1.18
CLIP1-201ENST00000302528 BEAN1Q3B7T3 259 aa7.67□□□□□ -1.18
CLIP1-201ENST00000302528 ZNF843Q8N446 348 aa7.67□□□□□ -1.18
CLIP1-201ENST00000302528 TRAV7A0A075B6U4 112 aa7.67□□□□□ -1.18
CLIP1-201ENST00000302528 PLA2G2AP14555 144 aa7.67□□□□□ -1.18
CLIP1-201ENST00000302528 SORL1Q92673 2214 aa7.66□□□□□ -1.18
CLIP1-201ENST00000302528 HIVEP2P31629 2446 aa7.66□□□□□ -1.18
CLIP1-201ENST00000302528 M0QXV9 152 aa7.66□□□□□ -1.18
CLIP1-201ENST00000302528 NTM-AS1Q6ZSK4 140 aa7.66□□□□□ -1.18
CLIP1-201ENST00000302528 LMO4P61968 165 aa7.66□□□□□ -1.18
CLIP1-201ENST00000302528 FAM208BQ5VWN6 2430 aa7.66□□□□□ -1.18
CLIP1-201ENST00000302528 PTPRQQ9UMZ3 2332 aa7.66□□□□□ -1.18
CLIP1-201ENST00000302528 PLA2G1BP04054 148 aaKnown RBP7.65□□□□□ -1.18
CLIP1-201ENST00000302528 C1orf137Q5JT78 98 aa7.65□□□□□ -1.18
CLIP1-201ENST00000302528 PSPHP1O15172 72 aa7.65□□□□□ -1.18
CLIP1-201ENST00000302528 FSHBP01225 129 aa7.65□□□□□ -1.18
CLIP1-201ENST00000302528 LINC01547P58512 204 aaPredicted RBP7.65□□□□□ -1.18
CLIP1-201ENST00000302528 Q6ZSV7 163 aa7.65□□□□□ -1.18
CLIP1-201ENST00000302528 LTBP2Q14767 1821 aa7.65□□□□□ -1.18
CLIP1-201ENST00000302528 CSDC2Q9Y534 153 aaKnown RBP7.65□□□□□ -1.19
CLIP1-201ENST00000302528 TSHBP01222 138 aa7.64□□□□□ -1.19
CLIP1-201ENST00000302528 FBXL19-AS1Q494R0 122 aa7.64□□□□□ -1.19
CLIP1-201ENST00000302528 TRBV7-7A0A0K0K1E9 115 aa7.64□□□□□ -1.19
CLIP1-201ENST00000302528 CYSRT1A8MQ03 144 aa7.63□□□□□ -1.19
CLIP1-201ENST00000302528 MUC7Q8TAX7 377 aa7.63□□□□□ -1.19
CLIP1-201ENST00000302528 MBD6Q96DN6 1003 aa7.63□□□□□ -1.19
CLIP1-201ENST00000302528 RNF185Q96GF1 192 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms