RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 FAM222AQ5U5X8 452 aa8.47□□□□□ -1.05
TPM3-202ENST00000302206 C2orf91Q6ZV80 131 aa8.47□□□□□ -1.05
TPM3-202ENST00000302206 SBSPONQ8IVN8 264 aa8.47□□□□□ -1.05
TPM3-202ENST00000302206 FAM104AQ969W3 186 aa8.47□□□□□ -1.05
TPM3-202ENST00000302206 CSDC2Q9Y534 153 aaKnown RBP8.47□□□□□ -1.05
TPM3-202ENST00000302206 IGKV2D-26A0A0A0MRZ7 120 aa8.46□□□□□ -1.06
TPM3-202ENST00000302206 E9PLD3 99 aa8.46□□□□□ -1.06
TPM3-202ENST00000302206 HERVK_113P61574 105 aa8.46□□□□□ -1.06
TPM3-202ENST00000302206 HIGD1BQ9P298 99 aa8.46□□□□□ -1.06
TPM3-202ENST00000302206 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.45□□□□□ -1.06
TPM3-202ENST00000302206 IGKV2-29A2NJV5 120 aaPredicted RBP8.45□□□□□ -1.06
TPM3-202ENST00000302206 PRB2P02812 416 aaPredicted RBP8.45□□□□□ -1.06
TPM3-202ENST00000302206 NTM-AS1Q6ZSK4 140 aa8.45□□□□□ -1.06
TPM3-202ENST00000302206 PCP2Q8IVA1 136 aa8.45□□□□□ -1.06
TPM3-202ENST00000302206 OPRPNQ99935 248 aaPredicted RBP8.45□□□□□ -1.06
TPM3-202ENST00000302206 PRO0255Q9UI72 69 aa8.45□□□□□ -1.06
TPM3-202ENST00000302206 SPART-AS1P0CW21 52 aa8.44□□□□□ -1.06
TPM3-202ENST00000302206 TMEM243Q9BU79 118 aa8.44□□□□□ -1.06
TPM3-202ENST00000302206 LOC100131303A0A0U1RQF7 123 aa8.43□□□□□ -1.06
TPM3-202ENST00000302206 DAD1P61803 113 aa8.43□□□□□ -1.06
TPM3-202ENST00000302206 COL5A1-AS1Q5SY13 56 aa8.43□□□□□ -1.06
TPM3-202ENST00000302206 CHAC1Q9BUX1 264 aa8.43□□□□□ -1.06
TPM3-202ENST00000302206 TP73-AS1Q9UF72 201 aa8.43□□□□□ -1.06
TPM3-202ENST00000302206 TRBV25-1A0A075B6N4 114 aa8.42□□□□□ -1.06
TPM3-202ENST00000302206 TINCRA0A1B0GVN0 87 aa8.42□□□□□ -1.06
TPM3-202ENST00000302206 ATP5G1P05496 136 aa8.42□□□□□ -1.06
TPM3-202ENST00000302206 ZNF25P17030 456 aaPredicted RBP8.42□□□□□ -1.06
TPM3-202ENST00000302206 DGAT2L7PQ6IED9 249 aa8.42□□□□□ -1.06
TPM3-202ENST00000302206 Q6ZUT4 128 aa8.42□□□□□ -1.06
TPM3-202ENST00000302206 FAM19A3Q7Z5A8 133 aa8.42□□□□□ -1.06
TPM3-202ENST00000302206 NOTCH3Q9UM47 2321 aa8.42□□□□□ -1.06
TPM3-202ENST00000302206 TRBV6-8A0A0A6YYG3 113 aa8.41□□□□□ -1.06
TPM3-202ENST00000302206 A0A0J9YXV3 536 aa8.41□□□□□ -1.06
TPM3-202ENST00000302206 G3V4G9 280 aa8.41□□□□□ -1.06
TPM3-202ENST00000302206 GYPEP15421 78 aa8.41□□□□□ -1.06
TPM3-202ENST00000302206 ZNF22P17026 224 aaPredicted RBP8.41□□□□□ -1.06
TPM3-202ENST00000302206 HINT1P49773 126 aaPredicted RBP8.41□□□□□ -1.06
TPM3-202ENST00000302206 TCTAP57738 103 aa8.41□□□□□ -1.06
TPM3-202ENST00000302206 HSD52Q0P140 79 aa8.41□□□□□ -1.06
TPM3-202ENST00000302206 MPV17L2Q567V2 206 aa8.41□□□□□ -1.06
TPM3-202ENST00000302206 BVES-AS1Q5T3Y7 98 aa8.41□□□□□ -1.06
TPM3-202ENST00000302206 CEMP1Q6PRD7 247 aaPredicted RBP8.41□□□□□ -1.06
TPM3-202ENST00000302206 MRAPQ8TCY5 172 aa8.41□□□□□ -1.06
TPM3-202ENST00000302206 MYMXA0A1B0GTQ4 84 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 TMEM223A0PJW6 202 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 UBE2L6O14933 153 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 PAX4O43316 350 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 UBE2D1P51668 147 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 TIRAPP58753 221 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 SEC11AP67812 179 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 BATFQ16520 125 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 TMEM170BQ5T4T1 132 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 MAPKAPK5-AS1Q8N8E1 139 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 OR5A1Q8NGJ0 315 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 ATP6V0E2Q8NHE4 81 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 TMEM101Q96IK0 257 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 C11orf68Q9H3H3 251 aaKnown RBP8.4□□□□□ -1.06
TPM3-202ENST00000302206 CELA1Q9UNI1 258 aa8.4□□□□□ -1.06
TPM3-202ENST00000302206 TRAV26-1A0A087WT03 109 aa8.39□□□□□ -1.07
TPM3-202ENST00000302206 TRAV8-6A0A0B4J262 113 aa8.39□□□□□ -1.07
TPM3-202ENST00000302206 LEPROTO15243 131 aa8.39□□□□□ -1.07
TPM3-202ENST00000302206 DEFB4AO15263 64 aa8.39□□□□□ -1.07
TPM3-202ENST00000302206 TAL2Q16559 108 aa8.39□□□□□ -1.07
TPM3-202ENST00000302206 AMMECR1LQ6DCA0 310 aa8.39□□□□□ -1.07
TPM3-202ENST00000302206 CDC42SE2Q9NRR3 84 aa8.39□□□□□ -1.07
TPM3-202ENST00000302206 IGLV5-45A0A087WSX0 123 aa8.38□□□□□ -1.07
TPM3-202ENST00000302206 KPRPQ5T749 579 aaPredicted RBP8.38□□□□□ -1.07
TPM3-202ENST00000302206 SH2D6Q7Z4S9 175 aa8.38□□□□□ -1.07
TPM3-202ENST00000302206 PLEKHB2Q96CS7 222 aa8.38□□□□□ -1.07
TPM3-202ENST00000302206 VSIG2Q96IQ7 327 aa8.38□□□□□ -1.07
TPM3-202ENST00000302206 TTTY13Q9BZ97 58 aa8.37□□□□□ -1.07
TPM3-202ENST00000302206 ZNF815PA8K554 130 aa8.36□□□□□ -1.07
TPM3-202ENST00000302206 J3QQQ9 107 aa8.36□□□□□ -1.07
TPM3-202ENST00000302206 HERVK_113P63121 156 aa8.36□□□□□ -1.07
TPM3-202ENST00000302206 RNASE13Q5GAN3 156 aaKnown RBP8.36□□□□□ -1.07
TPM3-202ENST00000302206 ORAOV1Q8WV07 137 aa8.36□□□□□ -1.07
TPM3-202ENST00000302206 GEMIN7Q9H840 131 aaKnown RBP8.36□□□□□ -1.07
TPM3-202ENST00000302206 A0A1B0GV90 55 aa8.35□□□□□ -1.07
TPM3-202ENST00000302206 H3BNG1 76 aa8.35□□□□□ -1.07
TPM3-202ENST00000302206 H3BRM9 83 aa8.35□□□□□ -1.07
TPM3-202ENST00000302206 LGALS3P17931 250 aaKnown RBP8.35□□□□□ -1.07
TPM3-202ENST00000302206 MRPL23Q16540 153 aaKnown RBP8.35□□□□□ -1.07
TPM3-202ENST00000302206 C12orf74Q32Q52 190 aa8.35□□□□□ -1.07
TPM3-202ENST00000302206 CHCHD5Q9BSY4 110 aa8.35□□□□□ -1.07
TPM3-202ENST00000302206 TENM3Q9P273 2699 aa8.34□□□□□ -1.07
TPM3-202ENST00000302206 IGHV1-58A0A0C4DH39 117 aa8.34□□□□□ -1.07
TPM3-202ENST00000302206 A0A1B0GUV1 79 aa8.34□□□□□ -1.07
TPM3-202ENST00000302206 F5H768 121 aa8.34□□□□□ -1.07
TPM3-202ENST00000302206 GAGE6Q13070 117 aa8.34□□□□□ -1.07
TPM3-202ENST00000302206 LINC00242Q5T6M2 205 aa8.34□□□□□ -1.07
TPM3-202ENST00000302206 LINC00469Q8N7U9 141 aa8.34□□□□□ -1.07
TPM3-202ENST00000302206 TM2D2Q9BX73 214 aa8.34□□□□□ -1.07
TPM3-202ENST00000302206 RETNQ9HD89 108 aa8.34□□□□□ -1.07
TPM3-202ENST00000302206 ICOSQ9Y6W8 199 aa8.34□□□□□ -1.07
TPM3-202ENST00000302206 A6NDN8 102 aa8.33□□□□□ -1.08
TPM3-202ENST00000302206 TSPEAR-AS2P59090 65 aa8.33□□□□□ -1.08
TPM3-202ENST00000302206 CEND1Q8N111 149 aa8.33□□□□□ -1.08
TPM3-202ENST00000302206 DNAH3Q8TD57 4116 aa8.33□□□□□ -1.08
TPM3-202ENST00000302206 A0A0J9YY99 117 aa8.32□□□□□ -1.08
TPM3-202ENST00000302206 IGHV3-30-3P0DP02 117 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms