RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 STHQ8IWL8 128 aa17.37■□□□□ 0.37
FOXA3-201ENST00000302177 WFDC11Q8NEX6 87 aa17.37■□□□□ 0.37
FOXA3-201ENST00000302177 GEMIN7Q9H840 131 aaKnown RBP17.37■□□□□ 0.37
FOXA3-201ENST00000302177 ZFAND6Q6FIF0 208 aa17.36■□□□□ 0.37
FOXA3-201ENST00000302177 RNASE13Q5GAN3 156 aaKnown RBP17.35■□□□□ 0.37
FOXA3-201ENST00000302177 C1orf158Q8N1D5 194 aa17.35■□□□□ 0.37
FOXA3-201ENST00000302177 XCL2Q9UBD3 114 aa17.35■□□□□ 0.37
FOXA3-201ENST00000302177 TRBV30A0A0K0K1B3 111 aa17.35■□□□□ 0.37
FOXA3-201ENST00000302177 MIAQ16674 131 aa17.34■□□□□ 0.37
FOXA3-201ENST00000302177 TRBV10-1A0A0K0K1A3 114 aa17.33■□□□□ 0.37
FOXA3-201ENST00000302177 LINC01600Q96MT4 127 aa17.33■□□□□ 0.37
FOXA3-201ENST00000302177 YAE1D1Q9NRH1 226 aa17.33■□□□□ 0.37
FOXA3-201ENST00000302177 IGHV3-38A0A0C4DH36 116 aa17.33■□□□□ 0.36
FOXA3-201ENST00000302177 CMC4P56277 68 aaPredicted RBP17.33■□□□□ 0.36
FOXA3-201ENST00000302177 SMAGPQ0VAQ4 97 aa17.33■□□□□ 0.36
FOXA3-201ENST00000302177 CARD19Q96LW7 228 aa17.33■□□□□ 0.36
FOXA3-201ENST00000302177 HIVEP1P15822 2718 aa17.32■□□□□ 0.36
FOXA3-201ENST00000302177 ADARB2-AS1A8MUL3 147 aa17.32■□□□□ 0.36
FOXA3-201ENST00000302177 DGAT2L7PQ6IED9 249 aa17.32■□□□□ 0.36
FOXA3-201ENST00000302177 FAM19A3Q7Z5A8 133 aa17.32■□□□□ 0.36
FOXA3-201ENST00000302177 PRSS2P07478 247 aa17.31■□□□□ 0.36
FOXA3-201ENST00000302177 SPINK8P0C7L1 97 aa17.31■□□□□ 0.36
FOXA3-201ENST00000302177 IFITM1P13164 125 aa17.31■□□□□ 0.36
FOXA3-201ENST00000302177 CSDC2Q9Y534 153 aaKnown RBP17.31■□□□□ 0.36
FOXA3-201ENST00000302177 ACANP16112 2415 aa17.31■□□□□ 0.36
FOXA3-201ENST00000302177 DNAJC9-AS1A6NH13 148 aa17.31■□□□□ 0.36
FOXA3-201ENST00000302177 CCL24O00175 119 aa17.31■□□□□ 0.36
FOXA3-201ENST00000302177 SLC25A20O43772 301 aa17.31■□□□□ 0.36
FOXA3-201ENST00000302177 ATXN8Q156A1 80 aa17.31■□□□□ 0.36
FOXA3-201ENST00000302177 ADAMTSL4-AS1Q5T5F5 129 aa17.31■□□□□ 0.36
FOXA3-201ENST00000302177 FLNAP21333 2647 aaKnown RBP17.29■□□□□ 0.36
FOXA3-201ENST00000302177 HERVK_113P63121 156 aa17.29■□□□□ 0.36
FOXA3-201ENST00000302177 DAZ2Q13117 558 aaKnown RBP17.29■□□□□ 0.36
FOXA3-201ENST00000302177 Q1RN00 199 aa17.29■□□□□ 0.36
FOXA3-201ENST00000302177 DAZ4Q86SG3 579 aaKnown RBP17.29■□□□□ 0.36
FOXA3-201ENST00000302177 CDIP1Q9H305 208 aa17.29■□□□□ 0.36
FOXA3-201ENST00000302177 DAZ3Q9NR90 486 aaKnown RBP17.29■□□□□ 0.36
FOXA3-201ENST00000302177 ZANQ9Y493 2812 aa17.29■□□□□ 0.36
FOXA3-201ENST00000302177 NDUFA1O15239 70 aa17.28■□□□□ 0.36
FOXA3-201ENST00000302177 RPL36AP83881 106 aaKnown RBP17.28■□□□□ 0.36
FOXA3-201ENST00000302177 RPL36ALQ969Q0 106 aaKnown RBP17.28■□□□□ 0.36
FOXA3-201ENST00000302177 CDKN2A-AS1Q9UH64 79 aa17.28■□□□□ 0.36
FOXA3-201ENST00000302177 TRGV1A0A0A0MS02 117 aa17.28■□□□□ 0.36
FOXA3-201ENST00000302177 F8P00451 2351 aa17.27■□□□□ 0.36
FOXA3-201ENST00000302177 MXRA5Q9NR99 2828 aa17.27■□□□□ 0.36
FOXA3-201ENST00000302177 C9JAW5 83 aa17.27■□□□□ 0.36
FOXA3-201ENST00000302177 H7C2G1 150 aa17.27■□□□□ 0.36
FOXA3-201ENST00000302177 ANKRD29Q8N6D5 301 aa17.27■□□□□ 0.36
FOXA3-201ENST00000302177 TRAV4A0A0B4J268 109 aa17.26■□□□□ 0.35
FOXA3-201ENST00000302177 TMEM101Q96IK0 257 aa17.26■□□□□ 0.35
FOXA3-201ENST00000302177 K7EQD1 137 aa17.26■□□□□ 0.35
FOXA3-201ENST00000302177 TEP1Q99973 2627 aaKnown RBP17.26■□□□□ 0.35
FOXA3-201ENST00000302177 IGHV3OR16-12A0A075B7B8 117 aa17.25■□□□□ 0.35
FOXA3-201ENST00000302177 IGLV5-39A0A0G2JS06 123 aa17.25■□□□□ 0.35
FOXA3-201ENST00000302177 A8MZ25 164 aa17.24■□□□□ 0.35
FOXA3-201ENST00000302177 CIRBPQ14011 172 aaKnown RBP17.24■□□□□ 0.35
FOXA3-201ENST00000302177 LINC01620Q4KN68 170 aa17.24■□□□□ 0.35
FOXA3-201ENST00000302177 TMEM262E9PQX1 116 aa17.24■□□□□ 0.35
FOXA3-201ENST00000302177 TRIAP1O43715 76 aa17.23■□□□□ 0.35
FOXA3-201ENST00000302177 LINC00242Q5T6M2 205 aa17.23■□□□□ 0.35
FOXA3-201ENST00000302177 FAM110AQ9BQ89 295 aa17.23■□□□□ 0.35
FOXA3-201ENST00000302177 CIDEAO60543 219 aa17.22■□□□□ 0.35
FOXA3-201ENST00000302177 COX6CP09669 75 aa17.22■□□□□ 0.35
FOXA3-201ENST00000302177 HIST2H2BDQ6DRA6 164 aa17.22■□□□□ 0.35
FOXA3-201ENST00000302177 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.22■□□□□ 0.35
FOXA3-201ENST00000302177 ICOSQ9Y6W8 199 aa17.22■□□□□ 0.35
FOXA3-201ENST00000302177 COX6A2Q02221 97 aa17.21■□□□□ 0.35
FOXA3-201ENST00000302177 C16orf95Q9H693 158 aa17.21■□□□□ 0.35
FOXA3-201ENST00000302177 TRBV10-2A0A0K0K1G8 114 aa17.2■□□□□ 0.34
FOXA3-201ENST00000302177 A0A1W2PRX2 142 aa17.2■□□□□ 0.34
FOXA3-201ENST00000302177 Q6ZTI0 123 aa17.2■□□□□ 0.34
FOXA3-201ENST00000302177 ESM1Q9NQ30 184 aa17.2■□□□□ 0.34
FOXA3-201ENST00000302177 NTM-AS1Q6ZSK4 140 aa17.19■□□□□ 0.34
FOXA3-201ENST00000302177 LINC00694P0DN24 101 aa17.19■□□□□ 0.34
FOXA3-201ENST00000302177 COPS9Q8WXC6 57 aa17.19■□□□□ 0.34
FOXA3-201ENST00000302177 SMR3AQ99954 134 aa17.19■□□□□ 0.34
FOXA3-201ENST00000302177 CITED2Q99967 270 aaPredicted RBP17.19■□□□□ 0.34
FOXA3-201ENST00000302177 C11orf44Q8N8P7 122 aa17.18■□□□□ 0.34
FOXA3-201ENST00000302177 C16orf74Q96GX8 76 aa17.17■□□□□ 0.34
FOXA3-201ENST00000302177 CDC42SE2Q9NRR3 84 aa17.17■□□□□ 0.34
FOXA3-201ENST00000302177 MTORP42345 2549 aa17.16■□□□□ 0.34
FOXA3-201ENST00000302177 RPL13AP40429 203 aaKnown RBP17.16■□□□□ 0.34
FOXA3-201ENST00000302177 H7C423 109 aa17.15■□□□□ 0.34
FOXA3-201ENST00000302177 GIG44P09565 113 aaPredicted RBP17.15■□□□□ 0.34
FOXA3-201ENST00000302177 SMIM1B2RUZ4 78 aa17.15■□□□□ 0.34
FOXA3-201ENST00000302177 LINC01006Q8NI28 216 aa17.15■□□□□ 0.34
FOXA3-201ENST00000302177 PPDPFQ9H3Y8 114 aa17.15■□□□□ 0.34
FOXA3-201ENST00000302177 Q9H8V8 135 aa17.15■□□□□ 0.34
FOXA3-201ENST00000302177 TLN2Q9Y4G6 2542 aa17.14■□□□□ 0.33
FOXA3-201ENST00000302177 RNASE1P07998 156 aaKnown RBP17.14■□□□□ 0.33
FOXA3-201ENST00000302177 NOP10Q9NPE3 64 aaKnown RBP17.14■□□□□ 0.33
FOXA3-201ENST00000302177 OVOL2Q9BRP0 275 aa17.13■□□□□ 0.33
FOXA3-201ENST00000302177 A0A1B0GV72 72 aa17.13■□□□□ 0.33
FOXA3-201ENST00000302177 TRBV6-4A0A1B0GX49 114 aa17.13■□□□□ 0.33
FOXA3-201ENST00000302177 GAGE12JA6NER3 117 aa17.13■□□□□ 0.33
FOXA3-201ENST00000302177 GAGE4Q13068 117 aa17.13■□□□□ 0.33
FOXA3-201ENST00000302177 GAGE5Q13069 117 aa17.13■□□□□ 0.33
FOXA3-201ENST00000302177 LINC00308Q8TCZ7 52 aa17.13■□□□□ 0.33
FOXA3-201ENST00000302177 PLAC8L1A1L4L8 177 aa17.12■□□□□ 0.33
FOXA3-201ENST00000302177 H3BT86 120 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms