RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 DAD1P61803 113 aa15.63■□□□□ 0.09
SMAD1-201ENST00000302085 BVES-AS1Q5T3Y7 98 aa15.63■□□□□ 0.09
SMAD1-201ENST00000302085 SAMD5Q5TGI4 173 aa15.62■□□□□ 0.09
SMAD1-201ENST00000302085 DGAT2L7PQ6IED9 249 aa15.62■□□□□ 0.09
SMAD1-201ENST00000302085 TMEM243Q9BU79 118 aa15.62■□□□□ 0.09
SMAD1-201ENST00000302085 TRBV25-1A0A075B6N4 114 aa15.62■□□□□ 0.09
SMAD1-201ENST00000302085 ZNF22P17026 224 aaPredicted RBP15.62■□□□□ 0.09
SMAD1-201ENST00000302085 COL5A1-AS1Q5SY13 56 aa15.62■□□□□ 0.09
SMAD1-201ENST00000302085 SPART-AS1P0CW21 52 aa15.61■□□□□ 0.09
SMAD1-201ENST00000302085 RETNQ9HD89 108 aa15.61■□□□□ 0.09
SMAD1-201ENST00000302085 CSDC2Q9Y534 153 aaKnown RBP15.61■□□□□ 0.09
SMAD1-201ENST00000302085 CMYA5Q8N3K9 4069 aa15.61■□□□□ 0.09
SMAD1-201ENST00000302085 HERVK_113P61574 105 aa15.6■□□□□ 0.09
SMAD1-201ENST00000302085 HIGD1BQ9P298 99 aa15.6■□□□□ 0.09
SMAD1-201ENST00000302085 TMEM223A0PJW6 202 aa15.59■□□□□ 0.09
SMAD1-201ENST00000302085 TRBV6-8A0A0A6YYG3 113 aa15.58■□□□□ 0.09
SMAD1-201ENST00000302085 MYMXA0A1B0GTQ4 84 aa15.58■□□□□ 0.09
SMAD1-201ENST00000302085 PAX4O43316 350 aa15.58■□□□□ 0.09
SMAD1-201ENST00000302085 ATP6V0E2Q8NHE4 81 aa15.58■□□□□ 0.09
SMAD1-201ENST00000302085 VSIG2Q96IQ7 327 aa15.58■□□□□ 0.09
SMAD1-201ENST00000302085 TINCRA0A1B0GVN0 87 aa15.57■□□□□ 0.08
SMAD1-201ENST00000302085 ATP5G1P05496 136 aa15.57■□□□□ 0.08
SMAD1-201ENST00000302085 UBE2D1P51668 147 aa15.57■□□□□ 0.08
SMAD1-201ENST00000302085 H7C423 109 aa15.56■□□□□ 0.08
SMAD1-201ENST00000302085 UBE2L6O14933 153 aa15.56■□□□□ 0.08
SMAD1-201ENST00000302085 HSD52Q0P140 79 aa15.56■□□□□ 0.08
SMAD1-201ENST00000302085 CDC42SE2Q9NRR3 84 aa15.56■□□□□ 0.08
SMAD1-201ENST00000302085 A0A0J9YY99 117 aa15.55■□□□□ 0.08
SMAD1-201ENST00000302085 TSPEAR-AS2P59090 65 aa15.55■□□□□ 0.08
SMAD1-201ENST00000302085 AMMECR1LQ6DCA0 310 aa15.55■□□□□ 0.08
SMAD1-201ENST00000302085 OR5A1Q8NGJ0 315 aa15.55■□□□□ 0.08
SMAD1-201ENST00000302085 SMAGPQ0VAQ4 97 aa15.55■□□□□ 0.08
SMAD1-201ENST00000302085 GAGE6Q13070 117 aa15.55■□□□□ 0.08
SMAD1-201ENST00000302085 ZNF815PA8K554 130 aa15.53■□□□□ 0.08
SMAD1-201ENST00000302085 F5H768 121 aa15.53■□□□□ 0.08
SMAD1-201ENST00000302085 LEPROTO15243 131 aa15.53■□□□□ 0.08
SMAD1-201ENST00000302085 TMEM101Q96IK0 257 aa15.53■□□□□ 0.08
SMAD1-201ENST00000302085 ZNF25P17030 456 aaPredicted RBP15.52■□□□□ 0.07
SMAD1-201ENST00000302085 TIRAPP58753 221 aa15.52■□□□□ 0.07
SMAD1-201ENST00000302085 MDFIQ99750 246 aa15.52■□□□□ 0.07
SMAD1-201ENST00000302085 CHCHD5Q9BSY4 110 aa15.52■□□□□ 0.07
SMAD1-201ENST00000302085 IGHV3-64A0A075B6Q5 118 aa15.51■□□□□ 0.07
SMAD1-201ENST00000302085 A0A096LPF7 62 aa15.51■□□□□ 0.07
SMAD1-201ENST00000302085 J3QQQ9 107 aa15.51■□□□□ 0.07
SMAD1-201ENST00000302085 C12orf74Q32Q52 190 aa15.51■□□□□ 0.07
SMAD1-201ENST00000302085 TRAV26-1A0A087WT03 109 aa15.51■□□□□ 0.07
SMAD1-201ENST00000302085 PRB2P02812 416 aaPredicted RBP15.51■□□□□ 0.07
SMAD1-201ENST00000302085 COX6A2Q02221 97 aa15.51■□□□□ 0.07
SMAD1-201ENST00000302085 ORAOV1Q8WV07 137 aa15.51■□□□□ 0.07
SMAD1-201ENST00000302085 PLEKHB2Q96CS7 222 aa15.51■□□□□ 0.07
SMAD1-201ENST00000302085 TEX48A0A1B0GUV7 120 aa15.5■□□□□ 0.07
SMAD1-201ENST00000302085 HTN3P15516 51 aa15.5■□□□□ 0.07
SMAD1-201ENST00000302085 LINC00242Q5T6M2 205 aa15.5■□□□□ 0.07
SMAD1-201ENST00000302085 FAM19A3Q7Z5A8 133 aa15.5■□□□□ 0.07
SMAD1-201ENST00000302085 GEMIN7Q9H840 131 aaKnown RBP15.5■□□□□ 0.07
SMAD1-201ENST00000302085 LINC00469Q8N7U9 141 aa15.49■□□□□ 0.07
SMAD1-201ENST00000302085 IGLV4-60A0A075B6I1 120 aa15.48■□□□□ 0.07
SMAD1-201ENST00000302085 IGLV5-45A0A087WSX0 123 aa15.48■□□□□ 0.07
SMAD1-201ENST00000302085 TRAV13-1A0A0B4J241 112 aa15.48■□□□□ 0.07
SMAD1-201ENST00000302085 LGALS3P17931 250 aaKnown RBP15.48■□□□□ 0.07
SMAD1-201ENST00000302085 TRAV8-3A0A0A6YYJ7 113 aa15.47■□□□□ 0.07
SMAD1-201ENST00000302085 SEC11AP67812 179 aa15.47■□□□□ 0.07
SMAD1-201ENST00000302085 CDKN2A-AS1Q9UH64 79 aa15.47■□□□□ 0.07
SMAD1-201ENST00000302085 IGHV3-30-3P0DP02 117 aa15.47■□□□□ 0.07
SMAD1-201ENST00000302085 Q6ZVH6 145 aa15.47■□□□□ 0.07
SMAD1-201ENST00000302085 DNAH3Q8TD57 4116 aa15.47■□□□□ 0.07
SMAD1-201ENST00000302085 SPINK8P0C7L1 97 aa15.45■□□□□ 0.06
SMAD1-201ENST00000302085 GCSHP23434 173 aa15.45■□□□□ 0.06
SMAD1-201ENST00000302085 C11orf68Q9H3H3 251 aaKnown RBP15.45■□□□□ 0.06
SMAD1-201ENST00000302085 IGHV1-58A0A0C4DH39 117 aa15.45■□□□□ 0.06
SMAD1-201ENST00000302085 TAL2Q16559 108 aa15.45■□□□□ 0.06
SMAD1-201ENST00000302085 NOTCH1P46531 2555 aa15.44■□□□□ 0.06
SMAD1-201ENST00000302085 TAX1BP3O14907 124 aa15.44■□□□□ 0.06
SMAD1-201ENST00000302085 HERVK_113P63121 156 aa15.44■□□□□ 0.06
SMAD1-201ENST00000302085 SCGB1D4Q6XE38 83 aa15.44■□□□□ 0.06
SMAD1-201ENST00000302085 CEND1Q8N111 149 aa15.44■□□□□ 0.06
SMAD1-201ENST00000302085 K7EIL1 84 aa15.44■□□□□ 0.06
SMAD1-201ENST00000302085 K7EP13 123 aa15.44■□□□□ 0.06
SMAD1-201ENST00000302085 FXYD2P54710 66 aa15.44■□□□□ 0.06
SMAD1-201ENST00000302085 HIST1H4GQ99525 98 aa15.44■□□□□ 0.06
SMAD1-201ENST00000302085 TM2D2Q9BX73 214 aa15.44■□□□□ 0.06
SMAD1-201ENST00000302085 MRPL23Q16540 153 aaKnown RBP15.42■□□□□ 0.06
SMAD1-201ENST00000302085 H3BRM9 83 aa15.42■□□□□ 0.06
SMAD1-201ENST00000302085 A0A0J9YWU9 116 aa15.41■□□□□ 0.06
SMAD1-201ENST00000302085 TMEM262E9PQX1 116 aa15.41■□□□□ 0.06
SMAD1-201ENST00000302085 KPRPQ5T749 579 aaPredicted RBP15.41■□□□□ 0.06
SMAD1-201ENST00000302085 A6NDN8 102 aa15.4■□□□□ 0.06
SMAD1-201ENST00000302085 COX11Q9Y6N1 276 aa15.4■□□□□ 0.06
SMAD1-201ENST00000302085 ICOSQ9Y6W8 199 aa15.4■□□□□ 0.06
SMAD1-201ENST00000302085 A0A1B0GUV1 79 aa15.4■□□□□ 0.06
SMAD1-201ENST00000302085 RBX1P62877 108 aa15.4■□□□□ 0.06
SMAD1-201ENST00000302085 ANK2Q01484 3957 aa15.39■□□□□ 0.05
SMAD1-201ENST00000302085 LURAP1LQ8IV03 231 aa15.39■□□□□ 0.05
SMAD1-201ENST00000302085 IGKV3OR2-268A0A0C4DH90 116 aa15.38■□□□□ 0.05
SMAD1-201ENST00000302085 Q6ZTC4 211 aa15.38■□□□□ 0.05
SMAD1-201ENST00000302085 C10orf126Q8N4M7 172 aa15.38■□□□□ 0.05
SMAD1-201ENST00000302085 PTTG1IPP53801 180 aa15.37■□□□□ 0.05
SMAD1-201ENST00000302085 DEFB121Q5J5C9 76 aa15.37■□□□□ 0.05
SMAD1-201ENST00000302085 SH2D6Q7Z4S9 175 aa15.37■□□□□ 0.05
SMAD1-201ENST00000302085 IGLV5-39A0A0G2JS06 123 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms