RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 SOSTDC1Q6X4U4 206 aa8□□□□□ -1.13
SNX20-201ENST00000300590 PRIMA1Q86XR5 153 aa8□□□□□ -1.13
SNX20-201ENST00000300590 C10orf105Q8TEF2 133 aa8□□□□□ -1.13
SNX20-201ENST00000300590 VPS13CQ709C8 3753 aa8□□□□□ -1.13
SNX20-201ENST00000300590 CSMD2Q7Z408 3487 aa8□□□□□ -1.13
SNX20-201ENST00000300590 A0A087WVE0 104 aa8□□□□□ -1.13
SNX20-201ENST00000300590 LY6DQ14210 128 aa8□□□□□ -1.13
SNX20-201ENST00000300590 HIVEP3Q5T1R4 2406 aa7.99□□□□□ -1.13
SNX20-201ENST00000300590 C11orf71Q6IPW1 123 aa7.99□□□□□ -1.13
SNX20-201ENST00000300590 UBE2D4Q9Y2X8 147 aa7.99□□□□□ -1.13
SNX20-201ENST00000300590 PYGO1Q9Y3Y4 419 aa7.99□□□□□ -1.13
SNX20-201ENST00000300590 KLK9Q2XQG4 91 aa7.99□□□□□ -1.13
SNX20-201ENST00000300590 USMG5Q96IX5 58 aa7.98□□□□□ -1.13
SNX20-201ENST00000300590 PKIGQ9Y2B9 76 aa7.98□□□□□ -1.13
SNX20-201ENST00000300590 C14orf132Q9NPU4 83 aa7.98□□□□□ -1.13
SNX20-201ENST00000300590 WNK1Q9H4A3 2382 aa7.98□□□□□ -1.13
SNX20-201ENST00000300590 DNAL4O96015 105 aa7.98□□□□□ -1.13
SNX20-201ENST00000300590 LMO4P61968 165 aa7.98□□□□□ -1.13
SNX20-201ENST00000300590 HIST1H4AP62805 103 aaKnown RBP7.98□□□□□ -1.13
SNX20-201ENST00000300590 PIMREGQ9BSJ6 248 aa7.98□□□□□ -1.13
SNX20-201ENST00000300590 CHCHD7Q9BUK0 85 aa7.98□□□□□ -1.13
SNX20-201ENST00000300590 IGHV4-38-2P0DP08 117 aa7.97□□□□□ -1.13
SNX20-201ENST00000300590 DPH3Q96FX2 82 aa7.97□□□□□ -1.13
SNX20-201ENST00000300590 ATP5G1P05496 136 aa7.97□□□□□ -1.13
SNX20-201ENST00000300590 RBMY1A1P0DJD3 496 aaKnown RBP7.97□□□□□ -1.13
SNX20-201ENST00000300590 RBMY1CP0DJD4 496 aa7.97□□□□□ -1.13
SNX20-201ENST00000300590 RBMY1FQ15415 496 aaKnown RBP7.97□□□□□ -1.13
SNX20-201ENST00000300590 IGKV3OR2-268A0A0C4DH90 116 aa7.96□□□□□ -1.13
SNX20-201ENST00000300590 NDUFA1O15239 70 aa7.96□□□□□ -1.13
SNX20-201ENST00000300590 C19orf54Q5BKX5 351 aa7.96□□□□□ -1.13
SNX20-201ENST00000300590 C9orf129Q5T035 196 aaKnown RBP7.96□□□□□ -1.13
SNX20-201ENST00000300590 USP9YO00507 2555 aaPredicted RBP7.96□□□□□ -1.13
SNX20-201ENST00000300590 TOMM7Q9P0U1 55 aa7.96□□□□□ -1.14
SNX20-201ENST00000300590 CRYGAP11844 174 aa7.95□□□□□ -1.14
SNX20-201ENST00000300590 MYO9AB2RTY4 2548 aa7.95□□□□□ -1.14
SNX20-201ENST00000300590 WIPF1O43516 503 aa7.95□□□□□ -1.14
SNX20-201ENST00000300590 ABCA2Q9BZC7 2435 aa7.95□□□□□ -1.14
SNX20-201ENST00000300590 IGHV3OR16-12A0A075B7B8 117 aa7.95□□□□□ -1.14
SNX20-201ENST00000300590 MALP21145 153 aa7.95□□□□□ -1.14
SNX20-201ENST00000300590 TMEM258P61165 79 aa7.95□□□□□ -1.14
SNX20-201ENST00000300590 C2orf48Q96LS8 159 aa7.95□□□□□ -1.14
SNX20-201ENST00000300590 RPS28P62857 69 aaKnown RBP7.94□□□□□ -1.14
SNX20-201ENST00000300590 CFHR3Q02985 330 aa7.94□□□□□ -1.14
SNX20-201ENST00000300590 C5orf38Q86SI9 138 aa7.94□□□□□ -1.14
SNX20-201ENST00000300590 C22orf24Q9Y442 160 aa7.94□□□□□ -1.14
SNX20-201ENST00000300590 INAFM2P0DMQ5 153 aa7.94□□□□□ -1.14
SNX20-201ENST00000300590 ADORA2A-AS1P86434 159 aa7.94□□□□□ -1.14
SNX20-201ENST00000300590 SLPIP03973 132 aa7.93□□□□□ -1.14
SNX20-201ENST00000300590 SETD2Q9BYW2 2564 aaPredicted RBP7.93□□□□□ -1.14
SNX20-201ENST00000300590 NCOR2Q9Y618 2525 aa7.93□□□□□ -1.14
SNX20-201ENST00000300590 TIMM17BO60830 172 aa7.93□□□□□ -1.14
SNX20-201ENST00000300590 DEFB131AP59861 70 aa7.93□□□□□ -1.14
SNX20-201ENST00000300590 RPL18AQ02543 176 aaKnown RBP7.93□□□□□ -1.14
SNX20-201ENST00000300590 IGHV3-53P01767 116 aa7.93□□□□□ -1.14
SNX20-201ENST00000300590 LINC00242Q5T6M2 205 aa7.93□□□□□ -1.14
SNX20-201ENST00000300590 MUC6Q6W4X9 2439 aa7.92□□□□□ -1.14
SNX20-201ENST00000300590 K7EQG2 157 aa7.92□□□□□ -1.14
SNX20-201ENST00000300590 BEAN1Q3B7T3 259 aa7.92□□□□□ -1.14
SNX20-201ENST00000300590 LINC00846Q9NV44 126 aa7.92□□□□□ -1.14
SNX20-201ENST00000300590 A0A087WYN8 130 aa7.91□□□□□ -1.14
SNX20-201ENST00000300590 NCR3O14931 201 aa7.91□□□□□ -1.14
SNX20-201ENST00000300590 WFDC9Q8NEX5 89 aa7.91□□□□□ -1.14
SNX20-201ENST00000300590 CRPP02741 224 aa7.91□□□□□ -1.14
SNX20-201ENST00000300590 SERP2Q8N6R1 65 aa7.91□□□□□ -1.14
SNX20-201ENST00000300590 OXTP01178 125 aa7.91□□□□□ -1.14
SNX20-201ENST00000300590 CXCL5P42830 114 aa7.91□□□□□ -1.14
SNX20-201ENST00000300590 HIST2H2BCQ6DN03 193 aa7.91□□□□□ -1.14
SNX20-201ENST00000300590 HIST2H2BDQ6DRA6 164 aa7.91□□□□□ -1.14
SNX20-201ENST00000300590 JMJD1CQ15652 2540 aa7.91□□□□□ -1.14
SNX20-201ENST00000300590 SMIM1B2RUZ4 78 aa7.9□□□□□ -1.14
SNX20-201ENST00000300590 CELSR2Q9HCU4 2923 aa7.9□□□□□ -1.14
SNX20-201ENST00000300590 PTPN13Q12923 2485 aa7.9□□□□□ -1.14
SNX20-201ENST00000300590 MIR7-3HGQ8N6C7 128 aa7.9□□□□□ -1.14
SNX20-201ENST00000300590 USP9XQ93008 2570 aaPredicted RBP7.9□□□□□ -1.15
SNX20-201ENST00000300590 USP17L23D6RBM5 183 aa7.9□□□□□ -1.15
SNX20-201ENST00000300590 K7EMT4 169 aa7.9□□□□□ -1.15
SNX20-201ENST00000300590 LECT2O14960 151 aa7.9□□□□□ -1.15
SNX20-201ENST00000300590 LINC00158P58513 81 aa7.9□□□□□ -1.15
SNX20-201ENST00000300590 FBXL19-AS1Q494R0 122 aa7.9□□□□□ -1.15
SNX20-201ENST00000300590 LINC00337Q8N6G1 96 aa7.9□□□□□ -1.15
SNX20-201ENST00000300590 RPL35AP18077 110 aaKnown RBP7.89□□□□□ -1.15
SNX20-201ENST00000300590 PFN2P35080 140 aa7.89□□□□□ -1.15
SNX20-201ENST00000300590 RNASE1P07998 156 aaKnown RBP7.89□□□□□ -1.15
SNX20-201ENST00000300590 WFDC11Q8NEX6 87 aa7.89□□□□□ -1.15
SNX20-201ENST00000300590 MRAPQ8TCY5 172 aa7.89□□□□□ -1.15
SNX20-201ENST00000300590 CHD8Q9HCK8 2581 aa7.89□□□□□ -1.15
SNX20-201ENST00000300590 J3QLI3 93 aa7.88□□□□□ -1.15
SNX20-201ENST00000300590 IGLV1-40P01703 118 aa7.88□□□□□ -1.15
SNX20-201ENST00000300590 TMEM243Q9BU79 118 aa7.88□□□□□ -1.15
SNX20-201ENST00000300590 SND1-IT1Q9HBX3 110 aa7.88□□□□□ -1.15
SNX20-201ENST00000300590 IGHV4-61A0A0C4DH41 118 aa7.88□□□□□ -1.15
SNX20-201ENST00000300590 HILS1P60008 231 aa7.88□□□□□ -1.15
SNX20-201ENST00000300590 C20orf197Q8N268 126 aa7.88□□□□□ -1.15
SNX20-201ENST00000300590 C11orf68Q9H3H3 251 aaKnown RBP7.88□□□□□ -1.15
SNX20-201ENST00000300590 A0A0U1RQV1 116 aa7.88□□□□□ -1.15
SNX20-201ENST00000300590 DEFB136Q30KP8 78 aa7.88□□□□□ -1.15
SNX20-201ENST00000300590 SMIM11BQ8TCY0 68 aa7.88□□□□□ -1.15
SNX20-201ENST00000300590 COPS9Q8WXC6 57 aa7.87□□□□□ -1.15
SNX20-201ENST00000300590 IGLV5-39A0A0G2JS06 123 aa7.87□□□□□ -1.15
SNX20-201ENST00000300590 A6NDX4 124 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms