RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 ESM1Q9NQ30 184 aa9.78□□□□□ -0.84
BCCIP-202ENST00000299130 TLN2Q9Y4G6 2542 aa9.78□□□□□ -0.84
BCCIP-202ENST00000299130 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.78□□□□□ -0.84
BCCIP-202ENST00000299130 STHQ8IWL8 128 aa9.78□□□□□ -0.84
BCCIP-202ENST00000299130 DAND5Q8N907 189 aa9.78□□□□□ -0.84
BCCIP-202ENST00000299130 TRIAP1O43715 76 aa9.77□□□□□ -0.85
BCCIP-202ENST00000299130 GEMIN7Q9H840 131 aaKnown RBP9.77□□□□□ -0.85
BCCIP-202ENST00000299130 WNK1Q9H4A3 2382 aa9.77□□□□□ -0.85
BCCIP-202ENST00000299130 SLC25A20O43772 301 aa9.77□□□□□ -0.85
BCCIP-202ENST00000299130 Q6ZTI0 123 aa9.77□□□□□ -0.85
BCCIP-202ENST00000299130 IL17DQ8TAD2 202 aa9.77□□□□□ -0.85
BCCIP-202ENST00000299130 SPANXDQ9BXN6 97 aa9.77□□□□□ -0.85
BCCIP-202ENST00000299130 SPANXCQ9NY87 97 aa9.77□□□□□ -0.85
BCCIP-202ENST00000299130 APCP25054 2843 aa9.77□□□□□ -0.85
BCCIP-202ENST00000299130 SONP18583 2426 aaKnown RBP9.77□□□□□ -0.85
BCCIP-202ENST00000299130 EPG5Q9HCE0 2579 aa9.76□□□□□ -0.85
BCCIP-202ENST00000299130 HIST2H2BCQ6DN03 193 aa9.76□□□□□ -0.85
BCCIP-202ENST00000299130 ZFAND6Q6FIF0 208 aa9.76□□□□□ -0.85
BCCIP-202ENST00000299130 TMEM101Q96IK0 257 aa9.76□□□□□ -0.85
BCCIP-202ENST00000299130 CCL24O00175 119 aa9.76□□□□□ -0.85
BCCIP-202ENST00000299130 MIAQ16674 131 aa9.76□□□□□ -0.85
BCCIP-202ENST00000299130 NTM-AS1Q6ZSK4 140 aa9.76□□□□□ -0.85
BCCIP-202ENST00000299130 MT-ATP8P03928 68 aa9.74□□□□□ -0.85
BCCIP-202ENST00000299130 DGAT2L7PQ6IED9 249 aa9.74□□□□□ -0.85
BCCIP-202ENST00000299130 WFDC10AQ9H1F0 79 aa9.74□□□□□ -0.85
BCCIP-202ENST00000299130 NF1P21359 2839 aa9.74□□□□□ -0.85
BCCIP-202ENST00000299130 XGP55808 180 aa9.74□□□□□ -0.85
BCCIP-202ENST00000299130 LINC00242Q5T6M2 205 aa9.74□□□□□ -0.85
BCCIP-202ENST00000299130 CITED2Q99967 270 aaPredicted RBP9.74□□□□□ -0.85
BCCIP-202ENST00000299130 IGLV5-45A0A087WSX0 123 aa9.73□□□□□ -0.85
BCCIP-202ENST00000299130 TIRAPP58753 221 aa9.73□□□□□ -0.85
BCCIP-202ENST00000299130 LINC01620Q4KN68 170 aa9.73□□□□□ -0.85
BCCIP-202ENST00000299130 ITPR3Q14573 2671 aa9.73□□□□□ -0.85
BCCIP-202ENST00000299130 TRBV30A0A0K0K1B3 111 aa9.73□□□□□ -0.85
BCCIP-202ENST00000299130 GIG44P09565 113 aaPredicted RBP9.73□□□□□ -0.85
BCCIP-202ENST00000299130 TMEM86BQ8N661 226 aa9.73□□□□□ -0.85
BCCIP-202ENST00000299130 ZNF625Q96I27 306 aaPredicted RBP9.73□□□□□ -0.85
BCCIP-202ENST00000299130 TRAV25A0A0B4J276 109 aa9.72□□□□□ -0.85
BCCIP-202ENST00000299130 ICOSQ9Y6W8 199 aa9.72□□□□□ -0.85
BCCIP-202ENST00000299130 GAGE12JA6NER3 117 aa9.72□□□□□ -0.85
BCCIP-202ENST00000299130 K7EQD1 137 aa9.72□□□□□ -0.85
BCCIP-202ENST00000299130 PLA2G2AP14555 144 aa9.72□□□□□ -0.85
BCCIP-202ENST00000299130 GAGE4Q13068 117 aa9.72□□□□□ -0.85
BCCIP-202ENST00000299130 GAGE5Q13069 117 aa9.72□□□□□ -0.85
BCCIP-202ENST00000299130 ATXN8Q156A1 80 aa9.72□□□□□ -0.85
BCCIP-202ENST00000299130 NOP10Q9NPE3 64 aaKnown RBP9.72□□□□□ -0.85
BCCIP-202ENST00000299130 NBPF19A0A087WUL8 3843 aa9.71□□□□□ -0.85
BCCIP-202ENST00000299130 A0A0U1RRA0 63 aa9.71□□□□□ -0.85
BCCIP-202ENST00000299130 NDUFA1O15239 70 aa9.71□□□□□ -0.85
BCCIP-202ENST00000299130 NIPBLQ6KC79 2804 aaeCLIP9.71□□□□□ -0.86
BCCIP-202ENST00000299130 TRAV13-1A0A0B4J241 112 aa9.71□□□□□ -0.86
BCCIP-202ENST00000299130 NTN5Q8WTR8 489 aaPredicted RBP9.71□□□□□ -0.86
BCCIP-202ENST00000299130 CLEC2BQ92478 149 aa9.71□□□□□ -0.86
BCCIP-202ENST00000299130 RPL36AP83881 106 aaKnown RBP9.7□□□□□ -0.86
BCCIP-202ENST00000299130 RPL36ALQ969Q0 106 aaKnown RBP9.7□□□□□ -0.86
BCCIP-202ENST00000299130 Q9H8V8 135 aa9.7□□□□□ -0.86
BCCIP-202ENST00000299130 IGLV5-39A0A0G2JS06 123 aa9.7□□□□□ -0.86
BCCIP-202ENST00000299130 LOC100131303A0A0U1RQF7 123 aa9.7□□□□□ -0.86
BCCIP-202ENST00000299130 PLAC8L1A1L4L8 177 aa9.69□□□□□ -0.86
BCCIP-202ENST00000299130 SMIM1B2RUZ4 78 aa9.69□□□□□ -0.86
BCCIP-202ENST00000299130 TIMM17BO60830 172 aa9.69□□□□□ -0.86
BCCIP-202ENST00000299130 TRAV4A0A0B4J268 109 aa9.68□□□□□ -0.86
BCCIP-202ENST00000299130 M0QXV9 152 aa9.68□□□□□ -0.86
BCCIP-202ENST00000299130 RPL35AP18077 110 aaKnown RBP9.68□□□□□ -0.86
BCCIP-202ENST00000299130 RPL13AP40429 203 aaKnown RBP9.68□□□□□ -0.86
BCCIP-202ENST00000299130 TEX49A0A1B0GTD5 131 aa9.68□□□□□ -0.86
BCCIP-202ENST00000299130 HERVK_113P63121 156 aa9.68□□□□□ -0.86
BCCIP-202ENST00000299130 LINC01006Q8NI28 216 aa9.68□□□□□ -0.86
BCCIP-202ENST00000299130 GAGE7O76087 117 aa9.67□□□□□ -0.86
BCCIP-202ENST00000299130 GAGE12FP0CL80 117 aa9.67□□□□□ -0.86
BCCIP-202ENST00000299130 GAGE12GP0CL81 117 aa9.67□□□□□ -0.86
BCCIP-202ENST00000299130 GAGE12IP0CL82 117 aa9.67□□□□□ -0.86
BCCIP-202ENST00000299130 YAE1D1Q9NRH1 226 aa9.67□□□□□ -0.86
BCCIP-202ENST00000299130 CDC42SE2Q9NRR3 84 aa9.67□□□□□ -0.86
BCCIP-202ENST00000299130 SETXQ7Z333 2677 aaKnown RBP9.67□□□□□ -0.86
BCCIP-202ENST00000299130 TRBV10-1A0A0K0K1A3 114 aa9.67□□□□□ -0.86
BCCIP-202ENST00000299130 TRBV10-2A0A0K0K1G8 114 aa9.67□□□□□ -0.86
BCCIP-202ENST00000299130 H7C423 109 aa9.67□□□□□ -0.86
BCCIP-202ENST00000299130 SOSTDC1Q6X4U4 206 aa9.67□□□□□ -0.86
BCCIP-202ENST00000299130 LINC00308Q8TCZ7 52 aa9.67□□□□□ -0.86
BCCIP-202ENST00000299130 F5H768 121 aa9.66□□□□□ -0.86
BCCIP-202ENST00000299130 KRTAP1-1Q07627 177 aa9.66□□□□□ -0.86
BCCIP-202ENST00000299130 DAZ2Q13117 558 aaKnown RBP9.66□□□□□ -0.86
BCCIP-202ENST00000299130 FAM19A3Q7Z5A8 133 aa9.66□□□□□ -0.86
BCCIP-202ENST00000299130 DAZ4Q86SG3 579 aaKnown RBP9.66□□□□□ -0.86
BCCIP-202ENST00000299130 DAZ3Q9NR90 486 aaKnown RBP9.66□□□□□ -0.86
BCCIP-202ENST00000299130 FLNAP21333 2647 aaKnown RBP9.66□□□□□ -0.86
BCCIP-202ENST00000299130 IFITM1P13164 125 aa9.66□□□□□ -0.86
BCCIP-202ENST00000299130 C19orf73Q9NVV2 129 aa9.66□□□□□ -0.86
BCCIP-202ENST00000299130 CSDC2Q9Y534 153 aaKnown RBP9.66□□□□□ -0.86
BCCIP-202ENST00000299130 NOTCH3Q9UM47 2321 aa9.66□□□□□ -0.86
BCCIP-202ENST00000299130 RNF183Q96D59 192 aa9.65□□□□□ -0.86
BCCIP-202ENST00000299130 CCDC168Q8NDH2 2452 aa9.65□□□□□ -0.86
BCCIP-202ENST00000299130 CKS1BP61024 79 aa9.65□□□□□ -0.87
BCCIP-202ENST00000299130 C2orf82Q6UX34 121 aa9.64□□□□□ -0.87
BCCIP-202ENST00000299130 LINC01600Q96MT4 127 aa9.64□□□□□ -0.87
BCCIP-202ENST00000299130 JMJD1CQ15652 2540 aa9.64□□□□□ -0.87
BCCIP-202ENST00000299130 TRGV2A0A075B6R0 118 aa9.64□□□□□ -0.87
BCCIP-202ENST00000299130 CIRBPQ14011 172 aaKnown RBP9.64□□□□□ -0.87
BCCIP-202ENST00000299130 SETD2Q9BYW2 2564 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms