RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 LINC00299Q6ZSB3 139 aa10.36□□□□□ -0.75
LRPAP1-201ENST00000296325 TMUB2Q71RG4 321 aa10.36□□□□□ -0.75
LRPAP1-201ENST00000296325 CNFNQ9BYD5 112 aa10.36□□□□□ -0.75
LRPAP1-201ENST00000296325 CDIP1Q9H305 208 aa10.36□□□□□ -0.75
LRPAP1-201ENST00000296325 A0A087X002 238 aa10.35□□□□□ -0.75
LRPAP1-201ENST00000296325 G3V3Q6 166 aa10.35□□□□□ -0.75
LRPAP1-201ENST00000296325 CTRLP40313 264 aa10.34□□□□□ -0.75
LRPAP1-201ENST00000296325 RPL35P42766 123 aaKnown RBP10.34□□□□□ -0.75
LRPAP1-201ENST00000296325 FAM19A5Q7Z5A7 132 aaPredicted RBP10.34□□□□□ -0.75
LRPAP1-201ENST00000296325 C9orf62Q8N4C0 152 aa10.34□□□□□ -0.75
LRPAP1-201ENST00000296325 MRPL35Q9NZE8 188 aaKnown RBP10.34□□□□□ -0.75
LRPAP1-201ENST00000296325 C1orf196B1AJZ1 125 aa10.33□□□□□ -0.76
LRPAP1-201ENST00000296325 TLX1NBP0CAT3 122 aa10.33□□□□□ -0.76
LRPAP1-201ENST00000296325 ZNF861PO60384 105 aa10.32□□□□□ -0.76
LRPAP1-201ENST00000296325 DEFA1P59665 94 aa10.32□□□□□ -0.76
LRPAP1-201ENST00000296325 S100ZQ8WXG8 99 aa10.32□□□□□ -0.76
LRPAP1-201ENST00000296325 RETNLBQ9BQ08 111 aa10.32□□□□□ -0.76
LRPAP1-201ENST00000296325 I3L3M4 83 aa10.31□□□□□ -0.76
LRPAP1-201ENST00000296325 PFDN1O60925 122 aa10.31□□□□□ -0.76
LRPAP1-201ENST00000296325 TSHBP01222 138 aa10.31□□□□□ -0.76
LRPAP1-201ENST00000296325 LINC01547P58512 204 aaPredicted RBP10.31□□□□□ -0.76
LRPAP1-201ENST00000296325 SPAG11BQ08648 103 aa10.31□□□□□ -0.76
LRPAP1-201ENST00000296325 MRAP2Q96G30 205 aa10.31□□□□□ -0.76
LRPAP1-201ENST00000296325 IMMP2LQ96T52 175 aa10.31□□□□□ -0.76
LRPAP1-201ENST00000296325 XKRY2A2RUG3 117 aa10.3□□□□□ -0.76
LRPAP1-201ENST00000296325 M0QXV9 152 aa10.3□□□□□ -0.76
LRPAP1-201ENST00000296325 IFNA1P01562 189 aa10.3□□□□□ -0.76
LRPAP1-201ENST00000296325 TRBV6-5A0A0K0K1A5 114 aa10.29□□□□□ -0.76
LRPAP1-201ENST00000296325 UBE2BP63146 152 aa10.29□□□□□ -0.76
LRPAP1-201ENST00000296325 CENPWQ5EE01 88 aa10.29□□□□□ -0.76
LRPAP1-201ENST00000296325 MBD3L1Q8WWY6 194 aa10.29□□□□□ -0.76
LRPAP1-201ENST00000296325 C11orf52Q96A22 123 aa10.29□□□□□ -0.76
LRPAP1-201ENST00000296325 PMCHP20382 165 aa10.28□□□□□ -0.76
LRPAP1-201ENST00000296325 TWIST1Q15672 202 aa10.28□□□□□ -0.76
LRPAP1-201ENST00000296325 C10orf25Q5T742 122 aa10.28□□□□□ -0.76
LRPAP1-201ENST00000296325 C5orf38Q86SI9 138 aa10.28□□□□□ -0.76
LRPAP1-201ENST00000296325 OR10D4PQ8NGN7 298 aa10.28□□□□□ -0.76
LRPAP1-201ENST00000296325 FAM210AQ96ND0 272 aa10.28□□□□□ -0.76
LRPAP1-201ENST00000296325 F8WDY8 70 aa10.27□□□□□ -0.77
LRPAP1-201ENST00000296325 FOXA3P55318 350 aaPredicted RBP10.27□□□□□ -0.77
LRPAP1-201ENST00000296325 TEX261Q6UWH6 196 aa10.27□□□□□ -0.77
LRPAP1-201ENST00000296325 TYMSOSQ8TAI1 123 aa10.27□□□□□ -0.77
LRPAP1-201ENST00000296325 SFT2D1Q8WV19 159 aa10.27□□□□□ -0.77
LRPAP1-201ENST00000296325 SMDT1Q9H4I9 107 aa10.27□□□□□ -0.77
LRPAP1-201ENST00000296325 CYTL1Q9NRR1 136 aa10.27□□□□□ -0.77
LRPAP1-201ENST00000296325 TMEM242Q9NWH2 141 aa10.27□□□□□ -0.77
LRPAP1-201ENST00000296325 IGLV7-46A0A075B6I9 117 aa10.26□□□□□ -0.77
LRPAP1-201ENST00000296325 SRSF3P84103 164 aaKnown RBP10.26□□□□□ -0.77
LRPAP1-201ENST00000296325 SMIM12Q96EX1 92 aa10.26□□□□□ -0.77
LRPAP1-201ENST00000296325 RNASE7Q9H1E1 156 aaKnown RBP10.26□□□□□ -0.77
LRPAP1-201ENST00000296325 CSDC2Q9Y534 153 aaKnown RBP10.26□□□□□ -0.77
LRPAP1-201ENST00000296325 ALG5Q9Y673 324 aa10.26□□□□□ -0.77
LRPAP1-201ENST00000296325 CRYGAP11844 174 aa10.25□□□□□ -0.77
LRPAP1-201ENST00000296325 C6orf48Q9UBA6 75 aa10.25□□□□□ -0.77
LRPAP1-201ENST00000296325 A0A1B0GV50 99 aa10.24□□□□□ -0.77
LRPAP1-201ENST00000296325 C7orf77A4D0Y5 90 aa10.24□□□□□ -0.77
LRPAP1-201ENST00000296325 GAGE2EQ4V326 116 aa10.24□□□□□ -0.77
LRPAP1-201ENST00000296325 KCNRGQ8N5I3 272 aa10.24□□□□□ -0.77
LRPAP1-201ENST00000296325 GAGE2DQ9UEU5 116 aa10.24□□□□□ -0.77
LRPAP1-201ENST00000296325 FXYD6-FXYD2A0A087WZ82 144 aa10.23□□□□□ -0.77
LRPAP1-201ENST00000296325 TRAV13-1A0A0B4J241 112 aa10.23□□□□□ -0.77
LRPAP1-201ENST00000296325 NDUFA1O15239 70 aa10.23□□□□□ -0.77
LRPAP1-201ENST00000296325 POLR2KP53803 58 aaKnown RBP10.23□□□□□ -0.77
LRPAP1-201ENST00000296325 TMEM241Q24JQ0 296 aa10.23□□□□□ -0.77
LRPAP1-201ENST00000296325 NDUFA13Q9P0J0 144 aa10.23□□□□□ -0.77
LRPAP1-201ENST00000296325 TRBV20OR9-2A0A075B6H5 130 aa10.22□□□□□ -0.77
LRPAP1-201ENST00000296325 TRBV27A0A0K0K1C4 114 aa10.22□□□□□ -0.77
LRPAP1-201ENST00000296325 GIPP09681 153 aaPredicted RBP10.22□□□□□ -0.77
LRPAP1-201ENST00000296325 CCL20P78556 96 aa10.22□□□□□ -0.77
LRPAP1-201ENST00000296325 KRTAP13-2Q52LG2 175 aa10.22□□□□□ -0.77
LRPAP1-201ENST00000296325 RNASE13Q5GAN3 156 aaKnown RBP10.22□□□□□ -0.77
LRPAP1-201ENST00000296325 UNQ6190/PRO20217Q6UXQ8 127 aa10.22□□□□□ -0.77
LRPAP1-201ENST00000296325 KRTAP4-1Q9BYQ7 146 aa10.22□□□□□ -0.77
LRPAP1-201ENST00000296325 FAM213BQ8TBF2 198 aa10.21□□□□□ -0.77
LRPAP1-201ENST00000296325 ORAOV1Q8WV07 137 aa10.21□□□□□ -0.77
LRPAP1-201ENST00000296325 UBE2D4Q9Y2X8 147 aa10.21□□□□□ -0.77
LRPAP1-201ENST00000296325 RAB19A4D1S5 217 aa10.2□□□□□ -0.78
LRPAP1-201ENST00000296325 NUPR1O60356 82 aa10.2□□□□□ -0.78
LRPAP1-201ENST00000296325 C9orf129Q5T035 196 aaKnown RBP10.2□□□□□ -0.78
LRPAP1-201ENST00000296325 NUDT10Q8NFP7 164 aa10.2□□□□□ -0.78
LRPAP1-201ENST00000296325 NUDT11Q96G61 164 aa10.2□□□□□ -0.78
LRPAP1-201ENST00000296325 IGHV3OR16-9A0A0B4J2B5 98 aa10.19□□□□□ -0.78
LRPAP1-201ENST00000296325 GNG4P50150 75 aa10.19□□□□□ -0.78
LRPAP1-201ENST00000296325 LINC00173Q6ZV60 143 aa10.19□□□□□ -0.78
LRPAP1-201ENST00000296325 ST20Q9HBF5 79 aa10.19□□□□□ -0.78
LRPAP1-201ENST00000296325 ASB16-AS1Q495Z4 193 aa10.18□□□□□ -0.78
LRPAP1-201ENST00000296325 Q6ZUT4 128 aa10.18□□□□□ -0.78
LRPAP1-201ENST00000296325 SMIM15Q7Z3B0 74 aa10.18□□□□□ -0.78
LRPAP1-201ENST00000296325 UMAD1C9J7I0 102 aa10.17□□□□□ -0.78
LRPAP1-201ENST00000296325 LINC00304Q8N9R0 145 aa10.17□□□□□ -0.78
LRPAP1-201ENST00000296325 CTDSP1Q9GZU7 261 aa10.17□□□□□ -0.78
LRPAP1-201ENST00000296325 PPDPFQ9H3Y8 114 aa10.17□□□□□ -0.78
LRPAP1-201ENST00000296325 CTAG1AP78358 180 aa10.16□□□□□ -0.78
LRPAP1-201ENST00000296325 LINC00242Q5T6M2 205 aa10.16□□□□□ -0.78
LRPAP1-201ENST00000296325 BIN3Q9NQY0 253 aa10.16□□□□□ -0.78
LRPAP1-201ENST00000296325 ANAPC11Q9NYG5 84 aa10.16□□□□□ -0.78
LRPAP1-201ENST00000296325 H2AFB1P0C5Y9 115 aa10.15□□□□□ -0.78
LRPAP1-201ENST00000296325 KIAA0087Q14695 138 aa10.15□□□□□ -0.78
LRPAP1-201ENST00000296325 MANBALQ9NQG1 85 aa10.15□□□□□ -0.78
LRPAP1-201ENST00000296325 NDUFC2-KCTD14E9PQ53 114 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms