RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 FAM218AQ96MZ4 157 aa7.45□□□□□ -1.22
LMX1A-201ENST00000294816 ABCA2Q9BZC7 2435 aa7.44□□□□□ -1.22
LMX1A-201ENST00000294816 IGHV3OR16-12A0A075B7B8 117 aa7.44□□□□□ -1.22
LMX1A-201ENST00000294816 hADV29S1A0JD25 119 aa7.44□□□□□ -1.22
LMX1A-201ENST00000294816 IGLV1-40P01703 118 aa7.44□□□□□ -1.22
LMX1A-201ENST00000294816 DNAL4O96015 105 aa7.44□□□□□ -1.22
LMX1A-201ENST00000294816 DNAJC30Q96LL9 226 aa7.44□□□□□ -1.22
LMX1A-201ENST00000294816 IGKV3OR2-268A0A0C4DH90 116 aa7.43□□□□□ -1.22
LMX1A-201ENST00000294816 LINC00526Q96FQ7 95 aa7.43□□□□□ -1.22
LMX1A-201ENST00000294816 TOMM7Q9P0U1 55 aa7.43□□□□□ -1.22
LMX1A-201ENST00000294816 INAFM2P0DMQ5 153 aa7.43□□□□□ -1.22
LMX1A-201ENST00000294816 ZNF415Q09FC8 603 aa7.43□□□□□ -1.22
LMX1A-201ENST00000294816 CSDC2Q9Y534 153 aaKnown RBP7.43□□□□□ -1.22
LMX1A-201ENST00000294816 IGHV3-53P01767 116 aa7.42□□□□□ -1.22
LMX1A-201ENST00000294816 COPS9Q8WXC6 57 aa7.42□□□□□ -1.22
LMX1A-201ENST00000294816 MUC6Q6W4X9 2439 aa7.42□□□□□ -1.22
LMX1A-201ENST00000294816 COX7CP15954 63 aa7.42□□□□□ -1.22
LMX1A-201ENST00000294816 CFHR3Q02985 330 aa7.42□□□□□ -1.22
LMX1A-201ENST00000294816 LINC00242Q5T6M2 205 aa7.42□□□□□ -1.22
LMX1A-201ENST00000294816 NRGNQ92686 78 aa7.42□□□□□ -1.22
LMX1A-201ENST00000294816 C14orf132Q9NPU4 83 aa7.42□□□□□ -1.22
LMX1A-201ENST00000294816 PEMTQ9UBM1 199 aa7.42□□□□□ -1.22
LMX1A-201ENST00000294816 J3KT08 172 aa7.42□□□□□ -1.22
LMX1A-201ENST00000294816 TRACP01848 142 aa7.42□□□□□ -1.22
LMX1A-201ENST00000294816 CRPP02741 224 aa7.42□□□□□ -1.22
LMX1A-201ENST00000294816 MALP21145 153 aa7.41□□□□□ -1.22
LMX1A-201ENST00000294816 A0A1B0GX51 115 aa7.4□□□□□ -1.22
LMX1A-201ENST00000294816 ATP5J2P56134 94 aa7.4□□□□□ -1.22
LMX1A-201ENST00000294816 FAM19A5Q7Z5A7 132 aaPredicted RBP7.4□□□□□ -1.22
LMX1A-201ENST00000294816 PIMREGQ9BSJ6 248 aa7.4□□□□□ -1.22
LMX1A-201ENST00000294816 SMIM1B2RUZ4 78 aa7.4□□□□□ -1.22
LMX1A-201ENST00000294816 IGHV4-59P01825 116 aa7.4□□□□□ -1.22
LMX1A-201ENST00000294816 ATP5G1P05496 136 aa7.4□□□□□ -1.23
LMX1A-201ENST00000294816 DEFB136Q30KP8 78 aa7.4□□□□□ -1.23
LMX1A-201ENST00000294816 A0A087WVE0 104 aa7.39□□□□□ -1.23
LMX1A-201ENST00000294816 ATOX1O00244 68 aa7.39□□□□□ -1.23
LMX1A-201ENST00000294816 PSMB8P28062 276 aa7.39□□□□□ -1.23
LMX1A-201ENST00000294816 OR13C6PQ8NH95 151 aa7.39□□□□□ -1.23
LMX1A-201ENST00000294816 LINC00158P58513 81 aa7.39□□□□□ -1.23
LMX1A-201ENST00000294816 KHDC1LQ5JSQ8 128 aa7.39□□□□□ -1.23
LMX1A-201ENST00000294816 TRGV1A0A0A0MS02 117 aa7.38□□□□□ -1.23
LMX1A-201ENST00000294816 RBMY1BA6NDE4 496 aaKnown RBP7.38□□□□□ -1.23
LMX1A-201ENST00000294816 RBMY1EA6NEQ0 496 aaKnown RBP7.38□□□□□ -1.23
LMX1A-201ENST00000294816 RBMY1DP0C7P1 496 aaKnown RBP7.38□□□□□ -1.23
LMX1A-201ENST00000294816 BEAN1Q3B7T3 259 aa7.38□□□□□ -1.23
LMX1A-201ENST00000294816 HIST2H2BCQ6DN03 193 aa7.38□□□□□ -1.23
LMX1A-201ENST00000294816 HIST2H2BDQ6DRA6 164 aa7.38□□□□□ -1.23
LMX1A-201ENST00000294816 C5orf38Q86SI9 138 aa7.38□□□□□ -1.23
LMX1A-201ENST00000294816 MIR7-3HGQ8N6C7 128 aa7.38□□□□□ -1.23
LMX1A-201ENST00000294816 IGLV5-39A0A0G2JS06 123 aa7.38□□□□□ -1.23
LMX1A-201ENST00000294816 CXCL5P42830 114 aa7.38□□□□□ -1.23
LMX1A-201ENST00000294816 IGLV5-45A0A087WSX0 123 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 A0A087WYN8 130 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 SLURP1P55000 103 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 HIST1H4AP62805 103 aaKnown RBP7.37□□□□□ -1.23
LMX1A-201ENST00000294816 C9orf129Q5T035 196 aaKnown RBP7.37□□□□□ -1.23
LMX1A-201ENST00000294816 UBE2E2Q96LR5 201 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 SND1-IT1Q9HBX3 110 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 XCL2Q9UBD3 114 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 C22orf24Q9Y442 160 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 C19orf84I3L1E1 186 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 SLPIP03973 132 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 LY6DQ14210 128 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 CYSTM1Q9H1C7 97 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 TRAV13-2A0A0B4J235 113 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 SMIM9A6NGZ8 99 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 AVPP01185 164 aa7.37□□□□□ -1.23
LMX1A-201ENST00000294816 CRYBG3Q68DQ2 2970 aa7.36□□□□□ -1.23
LMX1A-201ENST00000294816 UBE2L6O14933 153 aa7.36□□□□□ -1.23
LMX1A-201ENST00000294816 LRRC75A-AS1Q8N1F1 130 aa7.36□□□□□ -1.23
LMX1A-201ENST00000294816 KIR2DL5BQ8NHK3 375 aa7.36□□□□□ -1.23
LMX1A-201ENST00000294816 NCR3O14931 201 aa7.36□□□□□ -1.23
LMX1A-201ENST00000294816 LECT2O14960 151 aa7.36□□□□□ -1.23
LMX1A-201ENST00000294816 PFN2P35080 140 aa7.36□□□□□ -1.23
LMX1A-201ENST00000294816 DEFB112Q30KQ8 113 aa7.36□□□□□ -1.23
LMX1A-201ENST00000294816 C5orf47Q569G3 176 aa7.36□□□□□ -1.23
LMX1A-201ENST00000294816 LINC00337Q8N6G1 96 aa7.36□□□□□ -1.23
LMX1A-201ENST00000294816 C11orf68Q9H3H3 251 aaKnown RBP7.36□□□□□ -1.23
LMX1A-201ENST00000294816 IGHV4-30-2A0A087WSY4 118 aa7.36□□□□□ -1.23
LMX1A-201ENST00000294816 RPL18AQ02543 176 aaKnown RBP7.36□□□□□ -1.23
LMX1A-201ENST00000294816 C2orf48Q96LS8 159 aa7.36□□□□□ -1.23
LMX1A-201ENST00000294816 WNK1Q9H4A3 2382 aa7.35□□□□□ -1.23
LMX1A-201ENST00000294816 MSMBP08118 114 aa7.35□□□□□ -1.23
LMX1A-201ENST00000294816 RPL36AP83881 106 aaKnown RBP7.35□□□□□ -1.23
LMX1A-201ENST00000294816 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
LMX1A-201ENST00000294816 RPL36ALQ969Q0 106 aaKnown RBP7.35□□□□□ -1.23
LMX1A-201ENST00000294816 LINC00846Q9NV44 126 aa7.35□□□□□ -1.23
LMX1A-201ENST00000294816 SMIM11BQ8TCY0 68 aa7.35□□□□□ -1.23
LMX1A-201ENST00000294816 DSCR8Q96T75 97 aa7.35□□□□□ -1.23
LMX1A-201ENST00000294816 PAX4O43316 350 aa7.34□□□□□ -1.23
LMX1A-201ENST00000294816 C18orf65Q6ZTR6 163 aa7.34□□□□□ -1.23
LMX1A-201ENST00000294816 DYNLRB2Q8TF09 96 aa7.34□□□□□ -1.23
LMX1A-201ENST00000294816 CCL19Q99731 98 aa7.34□□□□□ -1.23
LMX1A-201ENST00000294816 CRYGAP11844 174 aa7.34□□□□□ -1.23
LMX1A-201ENST00000294816 INSP01308 110 aa7.34□□□□□ -1.23
LMX1A-201ENST00000294816 Q96MF0 132 aa7.34□□□□□ -1.23
LMX1A-201ENST00000294816 NCOR2Q9Y618 2525 aa7.33□□□□□ -1.24
LMX1A-201ENST00000294816 RPL28P46779 137 aaKnown RBP7.33□□□□□ -1.24
LMX1A-201ENST00000294816 TMEM89A2RUT3 159 aa7.33□□□□□ -1.24
LMX1A-201ENST00000294816 RNASE1P07998 156 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms