RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 SDIM1Q6ZPB5 146 aa4.48□□□□□ -1.69
VCAM1-201ENST00000294728 C11orf72Q8NBR9 251 aa4.48□□□□□ -1.69
VCAM1-201ENST00000294728 VPREB3Q9UKI3 123 aa4.48□□□□□ -1.69
VCAM1-201ENST00000294728 TNFRSF18Q9Y5U5 241 aa4.48□□□□□ -1.69
VCAM1-201ENST00000294728 WNK2Q9Y3S1 2297 aa4.48□□□□□ -1.69
VCAM1-201ENST00000294728 MXRA5Q9NR99 2828 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 IGHV4-30-2A0A087WSY4 118 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 TRAV25A0A0B4J276 109 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 TRBV10-1A0A0K0K1A3 114 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 TRBV7-7A0A0K0K1E9 115 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 H7C423 109 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 HERVK_113P63121 156 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 Q6YL49 198 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 UBE2WQ96B02 151 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 NDUFA12Q9UI09 145 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 COL6A5A8TX70 2615 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 PF4P02776 101 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 EMP1P54849 157 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 FAM74A4Q5TZK3 123 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 PEMTQ9UBM1 199 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 RBMY1A1P0DJD3 496 aaKnown RBP4.47□□□□□ -1.69
VCAM1-201ENST00000294728 RBMY1CP0DJD4 496 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 ATP5J2P56134 94 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 HERV-K104P63124 156 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 GAGE5Q13069 117 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 GAGE6Q13070 117 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 CIRBPQ14011 172 aaKnown RBP4.47□□□□□ -1.69
VCAM1-201ENST00000294728 RBMY1FQ15415 496 aaKnown RBP4.47□□□□□ -1.69
VCAM1-201ENST00000294728 SPINK13Q1W4C9 94 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 ZNF702PQ9H963 129 aa4.47□□□□□ -1.69
VCAM1-201ENST00000294728 HIVEP2P31629 2446 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 TRAV4A0A0B4J268 109 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 SNCGO76070 127 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 HOXD3P31249 432 aaPredicted RBP4.46□□□□□ -1.7
VCAM1-201ENST00000294728 FAM222AQ5U5X8 452 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 SHISA2Q6UWI4 295 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 OPRPNQ99935 248 aaPredicted RBP4.46□□□□□ -1.7
VCAM1-201ENST00000294728 TRAV26-1A0A087WT03 109 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 TRAV8-4A0A0B4J246 113 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 TRACP01848 142 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 GAGE2BQ13066 116 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 GAGE2EQ4V326 116 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 TMEM86BQ8N661 226 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 C4orf3Q8WVX3 66 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 RAX2Q96IS3 184 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 GAGE2DQ9UEU5 116 aa4.46□□□□□ -1.7
VCAM1-201ENST00000294728 TRAV12-2A0A075B6T6 113 aa4.45□□□□□ -1.7
VCAM1-201ENST00000294728 IGHV3OR16-10A0A075B7F0 116 aa4.45□□□□□ -1.7
VCAM1-201ENST00000294728 AVPP01185 164 aa4.45□□□□□ -1.7
VCAM1-201ENST00000294728 NHLRC4P0CG21 123 aaPredicted RBP4.45□□□□□ -1.7
VCAM1-201ENST00000294728 EDN2P20800 178 aa4.45□□□□□ -1.7
VCAM1-201ENST00000294728 DEFB112Q30KQ8 113 aa4.45□□□□□ -1.7
VCAM1-201ENST00000294728 ADAMTSL4-AS1Q5T5F5 129 aa4.45□□□□□ -1.7
VCAM1-201ENST00000294728 NTN5Q8WTR8 489 aaPredicted RBP4.45□□□□□ -1.7
VCAM1-201ENST00000294728 ATP5G1P05496 136 aa4.45□□□□□ -1.7
VCAM1-201ENST00000294728 NDUFV3P56181 108 aaKnown RBP4.45□□□□□ -1.7
VCAM1-201ENST00000294728 CMC4P56277 68 aaPredicted RBP4.45□□□□□ -1.7
VCAM1-201ENST00000294728 DAZ2Q13117 558 aaKnown RBP4.45□□□□□ -1.7
VCAM1-201ENST00000294728 DAZ4Q86SG3 579 aaKnown RBP4.45□□□□□ -1.7
VCAM1-201ENST00000294728 ANAPC13Q9BS18 74 aa4.45□□□□□ -1.7
VCAM1-201ENST00000294728 DAZ3Q9NR90 486 aaKnown RBP4.45□□□□□ -1.7
VCAM1-201ENST00000294728 COX7A2LO14548 114 aa4.44□□□□□ -1.7
VCAM1-201ENST00000294728 SFTA2Q6UW10 78 aa4.44□□□□□ -1.7
VCAM1-201ENST00000294728 C2orf82Q6UX34 121 aa4.44□□□□□ -1.7
VCAM1-201ENST00000294728 FAM110AQ9BQ89 295 aa4.44□□□□□ -1.7
VCAM1-201ENST00000294728 OVOL2Q9BRP0 275 aa4.44□□□□□ -1.7
VCAM1-201ENST00000294728 INSP01308 110 aa4.44□□□□□ -1.7
VCAM1-201ENST00000294728 IGHV4-59P01825 116 aa4.44□□□□□ -1.7
VCAM1-201ENST00000294728 SYNJ2BPP57105 145 aa4.44□□□□□ -1.7
VCAM1-201ENST00000294728 MAPK1IP1LQ8NDC0 245 aa4.44□□□□□ -1.7
VCAM1-201ENST00000294728 ZNF625Q96I27 306 aaPredicted RBP4.44□□□□□ -1.7
VCAM1-201ENST00000294728 TMEM101Q96IK0 257 aa4.44□□□□□ -1.7
VCAM1-201ENST00000294728 STAB1Q9NY15 2570 aa4.44□□□□□ -1.7
VCAM1-201ENST00000294728 RBMY1BA6NDE4 496 aaKnown RBP4.44□□□□□ -1.7
VCAM1-201ENST00000294728 RBMY1EA6NEQ0 496 aaKnown RBP4.44□□□□□ -1.7
VCAM1-201ENST00000294728 RBMY1DP0C7P1 496 aaKnown RBP4.44□□□□□ -1.7
VCAM1-201ENST00000294728 Q1RN00 199 aa4.44□□□□□ -1.7
VCAM1-201ENST00000294728 CITED2Q99967 270 aaPredicted RBP4.44□□□□□ -1.7
VCAM1-201ENST00000294728 AKAP6Q13023 2319 aa4.43□□□□□ -1.7
VCAM1-201ENST00000294728 IGKV3-7A0A075B6H7 116 aa4.43□□□□□ -1.7
VCAM1-201ENST00000294728 DAND5Q8N907 189 aa4.43□□□□□ -1.7
VCAM1-201ENST00000294728 LINC00308Q8TCZ7 52 aa4.43□□□□□ -1.7
VCAM1-201ENST00000294728 JMJD1CQ15652 2540 aa4.43□□□□□ -1.7
VCAM1-201ENST00000294728 MAP1AP78559 2803 aaPredicted RBP4.43□□□□□ -1.7
VCAM1-201ENST00000294728 CXCL5P42830 114 aa4.43□□□□□ -1.7
VCAM1-201ENST00000294728 CFAP161Q6P656 301 aa4.43□□□□□ -1.7
VCAM1-201ENST00000294728 DUX3Q96PT4 197 aa4.43□□□□□ -1.7
VCAM1-201ENST00000294728 MAP6D1Q9H9H5 199 aa4.43□□□□□ -1.7
VCAM1-201ENST00000294728 TRAV8-3A0A0A6YYJ7 113 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 TEX49A0A1B0GTD5 131 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 GAGE12JA6NER3 117 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 GAGE7O76087 117 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 GAGE12FP0CL80 117 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 GAGE12GP0CL81 117 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 GAGE12IP0CL82 117 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 IGHV4-31P0DP07 118 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 GAGE4Q13068 117 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 LINC00242Q5T6M2 205 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 DUX5Q96PT3 197 aa4.42□□□□□ -1.7
VCAM1-201ENST00000294728 CUBNO60494 3623 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms