RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 PRM2P04554 102 aa9.27□□□□□ -0.93
SLX4-201ENST00000294008 C19orf71A6NCJ1 209 aa9.26□□□□□ -0.93
SLX4-201ENST00000294008 RALGAPA2Q2PPJ7 1873 aa9.26□□□□□ -0.93
SLX4-201ENST00000294008 FREM1Q5H8C1 2179 aa9.26□□□□□ -0.93
SLX4-201ENST00000294008 CRYGAP11844 174 aa9.26□□□□□ -0.93
SLX4-201ENST00000294008 C11orf53Q8IXP5 236 aa9.26□□□□□ -0.93
SLX4-201ENST00000294008 SIPA1L1O43166 1804 aa9.26□□□□□ -0.93
SLX4-201ENST00000294008 EBI3Q14213 229 aa9.26□□□□□ -0.93
SLX4-201ENST00000294008 Q6ZSV7 163 aa9.26□□□□□ -0.93
SLX4-201ENST00000294008 C18orf65Q6ZTR6 163 aa9.26□□□□□ -0.93
SLX4-201ENST00000294008 REG3GQ6UW15 175 aa9.25□□□□□ -0.93
SLX4-201ENST00000294008 LINC01547P58512 204 aaPredicted RBP9.25□□□□□ -0.93
SLX4-201ENST00000294008 CDPF1Q6NVV7 123 aa9.25□□□□□ -0.93
SLX4-201ENST00000294008 A0A1B0GXF2 115 aa9.25□□□□□ -0.93
SLX4-201ENST00000294008 PSPHP1O15172 72 aa9.25□□□□□ -0.93
SLX4-201ENST00000294008 HELZP42694 1942 aaKnown RBP9.24□□□□□ -0.93
SLX4-201ENST00000294008 TDRG1Q3Y452 100 aa9.24□□□□□ -0.93
SLX4-201ENST00000294008 SBF1O95248 1867 aa9.24□□□□□ -0.93
SLX4-201ENST00000294008 MSMPQ1L6U9 139 aa9.24□□□□□ -0.93
SLX4-201ENST00000294008 SPACA4Q8TDM5 124 aa9.24□□□□□ -0.93
SLX4-201ENST00000294008 GDF5OSQ5U4N7 250 aa9.24□□□□□ -0.93
SLX4-201ENST00000294008 SPINT4Q6UDR6 99 aa9.24□□□□□ -0.93
SLX4-201ENST00000294008 GREB1LQ9C091 1923 aaPredicted RBP9.24□□□□□ -0.93
SLX4-201ENST00000294008 IBA57-AS1B1ANH7 110 aa9.24□□□□□ -0.93
SLX4-201ENST00000294008 RBX1P62877 108 aa9.24□□□□□ -0.93
SLX4-201ENST00000294008 E7EUB6 86 aa9.23□□□□□ -0.93
SLX4-201ENST00000294008 LINC00308Q8TCZ7 52 aa9.23□□□□□ -0.93
SLX4-201ENST00000294008 U3KQK5 164 aa9.23□□□□□ -0.93
SLX4-201ENST00000294008 C20orf173Q96LM9 149 aa9.23□□□□□ -0.93
SLX4-201ENST00000294008 UQCRQO14949 82 aa9.23□□□□□ -0.93
SLX4-201ENST00000294008 NUPR1O60356 82 aa9.23□□□□□ -0.93
SLX4-201ENST00000294008 COX6B2Q6YFQ2 88 aa9.23□□□□□ -0.93
SLX4-201ENST00000294008 RNASE3P12724 160 aaKnown RBP9.22□□□□□ -0.93
SLX4-201ENST00000294008 CCDC140Q96MF4 163 aa9.22□□□□□ -0.93
SLX4-201ENST00000294008 H7C423 109 aa9.22□□□□□ -0.93
SLX4-201ENST00000294008 ACYP2P14621 99 aa9.22□□□□□ -0.93
SLX4-201ENST00000294008 PYGO1Q9Y3Y4 419 aa9.21□□□□□ -0.93
SLX4-201ENST00000294008 RLFQ13129 1914 aa9.21□□□□□ -0.93
SLX4-201ENST00000294008 NBASA2RRP1 2371 aa9.21□□□□□ -0.93
SLX4-201ENST00000294008 TRBV30A0A0K0K1B3 111 aa9.21□□□□□ -0.93
SLX4-201ENST00000294008 LELP1Q5T871 98 aa9.21□□□□□ -0.93
SLX4-201ENST00000294008 ARHGAP21Q5T5U3 1957 aa9.21□□□□□ -0.94
SLX4-201ENST00000294008 TNFRSF13BO14836 293 aaPredicted RBP9.2□□□□□ -0.94
SLX4-201ENST00000294008 COA6Q5JTJ3 125 aaKnown RBP9.2□□□□□ -0.94
SLX4-201ENST00000294008 Q9BRP9 147 aa9.2□□□□□ -0.94
SLX4-201ENST00000294008 TANC2Q9HCD6 1990 aa9.2□□□□□ -0.94
SLX4-201ENST00000294008 CD164L2Q6UWJ8 174 aa9.2□□□□□ -0.94
SLX4-201ENST00000294008 LRRC75A-AS1Q8N1F1 130 aa9.2□□□□□ -0.94
SLX4-201ENST00000294008 MALRD1Q5VYJ5 2156 aa9.2□□□□□ -0.94
SLX4-201ENST00000294008 SHANK1Q9Y566 2161 aa9.19□□□□□ -0.94
SLX4-201ENST00000294008 IGLV8-61A0A075B6I0 122 aa9.19□□□□□ -0.94
SLX4-201ENST00000294008 TRIAP1O43715 76 aa9.19□□□□□ -0.94
SLX4-201ENST00000294008 NCOA6Q14686 2063 aaPredicted RBP9.19□□□□□ -0.94
SLX4-201ENST00000294008 MED13LQ71F56 2210 aa9.19□□□□□ -0.94
SLX4-201ENST00000294008 SORL1Q92673 2214 aa9.19□□□□□ -0.94
SLX4-201ENST00000294008 hDV103S1A0JD37 113 aa9.19□□□□□ -0.94
SLX4-201ENST00000294008 ZNF80P51504 273 aaPredicted RBP9.19□□□□□ -0.94
SLX4-201ENST00000294008 IGLV3-1P01715 115 aa9.19□□□□□ -0.94
SLX4-201ENST00000294008 ATP5EP2Q5VTU8 51 aa9.19□□□□□ -0.94
SLX4-201ENST00000294008 MED12LQ86YW9 2145 aa9.19□□□□□ -0.94
SLX4-201ENST00000294008 Q9UF83 564 aa9.19□□□□□ -0.94
SLX4-201ENST00000294008 IGLV4-3A0A075B6K6 122 aa9.19□□□□□ -0.94
SLX4-201ENST00000294008 C9orf116Q5BN46 136 aaPredicted RBP9.19□□□□□ -0.94
SLX4-201ENST00000294008 PRORYQ9H606 182 aa9.19□□□□□ -0.94
SLX4-201ENST00000294008 SMIM11BQ8TCY0 68 aa9.18□□□□□ -0.94
SLX4-201ENST00000294008 FRMPD3Q5JV73 1810 aa9.18□□□□□ -0.94
SLX4-201ENST00000294008 SPRY4Q9C004 299 aa9.18□□□□□ -0.94
SLX4-201ENST00000294008 LINC00959A0A1B0GUT2 108 aa9.17□□□□□ -0.94
SLX4-201ENST00000294008 ATP5EP56381 51 aaPredicted RBP9.17□□□□□ -0.94
SLX4-201ENST00000294008 RSPO1Q2MKA7 263 aaPredicted RBP9.17□□□□□ -0.94
SLX4-201ENST00000294008 NDUFC1O43677 76 aa9.17□□□□□ -0.94
SLX4-201ENST00000294008 ZNF524Q96C55 264 aa9.17□□□□□ -0.94
SLX4-201ENST00000294008 HIGD1BQ9P298 99 aa9.16□□□□□ -0.94
SLX4-201ENST00000294008 CYSRT1A8MQ03 144 aa9.16□□□□□ -0.94
SLX4-201ENST00000294008 TRBV6-4A0A1B0GX49 114 aa9.16□□□□□ -0.94
SLX4-201ENST00000294008 HCG22E2RYF7 251 aa9.16□□□□□ -0.94
SLX4-201ENST00000294008 H0Y9P7 68 aa9.16□□□□□ -0.94
SLX4-201ENST00000294008 A0A0G2JMZ2 1700 aa9.16□□□□□ -0.94
SLX4-201ENST00000294008 LRRC37A2A6NM11 1700 aa9.16□□□□□ -0.94
SLX4-201ENST00000294008 LIMD2Q9BT23 127 aa9.16□□□□□ -0.94
SLX4-201ENST00000294008 FAM229AH3BQW9 127 aa9.16□□□□□ -0.94
SLX4-201ENST00000294008 LINC01006Q8NI28 216 aa9.15□□□□□ -0.94
SLX4-201ENST00000294008 ODF3BA8MYP8 253 aa9.15□□□□□ -0.95
SLX4-201ENST00000294008 K7EQG2 157 aa9.15□□□□□ -0.95
SLX4-201ENST00000294008 ZNF22P17026 224 aaPredicted RBP9.15□□□□□ -0.95
SLX4-201ENST00000294008 COX6A2Q02221 97 aa9.15□□□□□ -0.95
SLX4-201ENST00000294008 HIVEP2P31629 2446 aa9.14□□□□□ -0.95
SLX4-201ENST00000294008 MRPS12O15235 138 aaKnown RBP9.14□□□□□ -0.95
SLX4-201ENST00000294008 FAM167A-AS1Q96KT0 104 aa9.14□□□□□ -0.95
SLX4-201ENST00000294008 FRMD6-AS1P0C7T7 363 aa9.13□□□□□ -0.95
SLX4-201ENST00000294008 ADAMTS9Q9P2N4 1935 aa9.13□□□□□ -0.95
SLX4-201ENST00000294008 WDR90Q96KV7 1748 aa9.13□□□□□ -0.95
SLX4-201ENST00000294008 PRR3P79522 188 aaKnown RBP9.12□□□□□ -0.95
SLX4-201ENST00000294008 RNASE8Q8TDE3 154 aaKnown RBP9.12□□□□□ -0.95
SLX4-201ENST00000294008 C1orf147Q96MC9 270 aaPredicted RBP9.12□□□□□ -0.95
SLX4-201ENST00000294008 DSCAMO60469 2012 aa9.12□□□□□ -0.95
SLX4-201ENST00000294008 A0A087WSZ3 146 aa9.12□□□□□ -0.95
SLX4-201ENST00000294008 UNQ6190/PRO20217Q6UXQ8 127 aa9.12□□□□□ -0.95
SLX4-201ENST00000294008 FHL2Q14192 279 aa9.12□□□□□ -0.95
SLX4-201ENST00000294008 PTPRQQ9UMZ3 2332 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms