RNA–Protein interactions for RNA: ENST00000293683.9

PDE4A-201, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-201ENST00000293683 NBPF19A0A087WUL8 3843 aa12.49□□□□□ -0.41
PDE4A-201ENST00000293683 IGHV3-53P01767 116 aa12.49□□□□□ -0.41
PDE4A-201ENST00000293683 Q6YL49 198 aa12.49□□□□□ -0.41
PDE4A-201ENST00000293683 TMEM101Q96IK0 257 aa12.49□□□□□ -0.41
PDE4A-201ENST00000293683 NF1P21359 2839 aa12.48□□□□□ -0.41
PDE4A-201ENST00000293683 ZNF462Q96JM2 2506 aa12.47□□□□□ -0.41
PDE4A-201ENST00000293683 IGHV3OR16-12A0A075B7B8 117 aa12.47□□□□□ -0.41
PDE4A-201ENST00000293683 TRAV8-4A0A0B4J246 113 aa12.47□□□□□ -0.41
PDE4A-201ENST00000293683 SNCGO76070 127 aa12.47□□□□□ -0.41
PDE4A-201ENST00000293683 NHLRC4P0CG21 123 aaPredicted RBP12.47□□□□□ -0.41
PDE4A-201ENST00000293683 LINC00694P0DN24 101 aa12.47□□□□□ -0.41
PDE4A-201ENST00000293683 XCL2Q9UBD3 114 aa12.47□□□□□ -0.41
PDE4A-201ENST00000293683 NAV2Q8IVL1 2488 aa12.47□□□□□ -0.41
PDE4A-201ENST00000293683 SONP18583 2426 aaKnown RBP12.46□□□□□ -0.41
PDE4A-201ENST00000293683 DSCR9P59020 149 aa12.46□□□□□ -0.42
PDE4A-201ENST00000293683 LINC01600Q96MT4 127 aa12.46□□□□□ -0.42
PDE4A-201ENST00000293683 COX6CP09669 75 aa12.45□□□□□ -0.42
PDE4A-201ENST00000293683 DGAT2L7PQ6IED9 249 aa12.45□□□□□ -0.42
PDE4A-201ENST00000293683 CITED2Q99967 270 aaPredicted RBP12.45□□□□□ -0.42
PDE4A-201ENST00000293683 SETD2Q9BYW2 2564 aaPredicted RBP12.45□□□□□ -0.42
PDE4A-201ENST00000293683 JMJD1CQ15652 2540 aa12.45□□□□□ -0.42
PDE4A-201ENST00000293683 LST1O00453 97 aa12.45□□□□□ -0.42
PDE4A-201ENST00000293683 GAGE2BQ13066 116 aa12.45□□□□□ -0.42
PDE4A-201ENST00000293683 GAGE2EQ4V326 116 aa12.45□□□□□ -0.42
PDE4A-201ENST00000293683 Q9H8V8 135 aa12.45□□□□□ -0.42
PDE4A-201ENST00000293683 GAGE2DQ9UEU5 116 aa12.45□□□□□ -0.42
PDE4A-201ENST00000293683 NDUFA1O15239 70 aa12.44□□□□□ -0.42
PDE4A-201ENST00000293683 J3QLI3 93 aa12.44□□□□□ -0.42
PDE4A-201ENST00000293683 C15orf53Q8NAA6 179 aa12.44□□□□□ -0.42
PDE4A-201ENST00000293683 DYNLRB2Q8TF09 96 aa12.44□□□□□ -0.42
PDE4A-201ENST00000293683 IGLV5-45A0A087WSX0 123 aa12.43□□□□□ -0.42
PDE4A-201ENST00000293683 RS1O15537 224 aa12.43□□□□□ -0.42
PDE4A-201ENST00000293683 FSHBP01225 129 aa12.43□□□□□ -0.42
PDE4A-201ENST00000293683 INSP01308 110 aa12.43□□□□□ -0.42
PDE4A-201ENST00000293683 BEAN1Q3B7T3 259 aa12.43□□□□□ -0.42
PDE4A-201ENST00000293683 PIK3CD-AS1Q5SR53 167 aa12.43□□□□□ -0.42
PDE4A-201ENST00000293683 LINC00242Q5T6M2 205 aa12.43□□□□□ -0.42
PDE4A-201ENST00000293683 PRB1P04280 392 aa12.43□□□□□ -0.42
PDE4A-201ENST00000293683 TTC32Q5I0X7 151 aa12.43□□□□□ -0.42
PDE4A-201ENST00000293683 YAE1D1Q9NRH1 226 aa12.43□□□□□ -0.42
PDE4A-201ENST00000293683 TRAV13-1A0A0B4J241 112 aa12.42□□□□□ -0.42
PDE4A-201ENST00000293683 DNAJC30Q96LL9 226 aa12.42□□□□□ -0.42
PDE4A-201ENST00000293683 CR1P17927 2039 aa12.42□□□□□ -0.42
PDE4A-201ENST00000293683 H3BT86 120 aa12.41□□□□□ -0.42
PDE4A-201ENST00000293683 TIMM17BO60830 172 aa12.41□□□□□ -0.42
PDE4A-201ENST00000293683 IGHV4-31P0DP07 118 aa12.41□□□□□ -0.42
PDE4A-201ENST00000293683 TIRAPP58753 221 aa12.41□□□□□ -0.42
PDE4A-201ENST00000293683 DEFB114Q30KQ6 69 aa12.41□□□□□ -0.42
PDE4A-201ENST00000293683 SOSTDC1Q6X4U4 206 aa12.41□□□□□ -0.42
PDE4A-201ENST00000293683 LINC00308Q8TCZ7 52 aa12.41□□□□□ -0.42
PDE4A-201ENST00000293683 PEMTQ9UBM1 199 aa12.41□□□□□ -0.42
PDE4A-201ENST00000293683 TRGV1A0A0A0MS02 117 aa12.41□□□□□ -0.42
PDE4A-201ENST00000293683 NDUFV3P56181 108 aaKnown RBP12.41□□□□□ -0.42
PDE4A-201ENST00000293683 USP24Q9UPU5 2620 aa12.41□□□□□ -0.42
PDE4A-201ENST00000293683 Q8N2B8 174 aa12.4□□□□□ -0.42
PDE4A-201ENST00000293683 IGLV5-39A0A0G2JS06 123 aa12.4□□□□□ -0.42
PDE4A-201ENST00000293683 IFITM1P13164 125 aa12.4□□□□□ -0.42
PDE4A-201ENST00000293683 ODF3L2Q3SX64 289 aa12.4□□□□□ -0.42
PDE4A-201ENST00000293683 NTM-AS1Q6ZSK4 140 aa12.39□□□□□ -0.43
PDE4A-201ENST00000293683 C11orf44Q8N8P7 122 aa12.39□□□□□ -0.43
PDE4A-201ENST00000293683 SMIM1B2RUZ4 78 aa12.39□□□□□ -0.43
PDE4A-201ENST00000293683 C1orf158Q8N1D5 194 aa12.39□□□□□ -0.43
PDE4A-201ENST00000293683 SETXQ7Z333 2677 aaKnown RBP12.39□□□□□ -0.43
PDE4A-201ENST00000293683 C4orf3Q8WVX3 66 aa12.38□□□□□ -0.43
PDE4A-201ENST00000293683 SS18L2Q9UHA2 77 aa12.38□□□□□ -0.43
PDE4A-201ENST00000293683 HERVK_113P63121 156 aa12.38□□□□□ -0.43
PDE4A-201ENST00000293683 Q6ZTI0 123 aa12.38□□□□□ -0.43
PDE4A-201ENST00000293683 B5MCH6 92 aa12.37□□□□□ -0.43
PDE4A-201ENST00000293683 CIRBPQ14011 172 aaKnown RBP12.37□□□□□ -0.43
PDE4A-201ENST00000293683 KRTAP10-9P60411 292 aa12.37□□□□□ -0.43
PDE4A-201ENST00000293683 CCDC179H3BU77 68 aa12.36□□□□□ -0.43
PDE4A-201ENST00000293683 PRIMA1Q86XR5 153 aa12.35□□□□□ -0.43
PDE4A-201ENST00000293683 A0A1W2PRX2 142 aa12.35□□□□□ -0.43
PDE4A-201ENST00000293683 GAGE12JA6NER3 117 aa12.35□□□□□ -0.43
PDE4A-201ENST00000293683 GAGE4Q13068 117 aa12.35□□□□□ -0.43
PDE4A-201ENST00000293683 GAGE5Q13069 117 aa12.35□□□□□ -0.43
PDE4A-201ENST00000293683 GAGE6Q13070 117 aa12.35□□□□□ -0.43
PDE4A-201ENST00000293683 MEIG1Q5JSS6 88 aa12.35□□□□□ -0.43
PDE4A-201ENST00000293683 STHQ8IWL8 128 aa12.34□□□□□ -0.43
PDE4A-201ENST00000293683 IL17DQ8TAD2 202 aa12.34□□□□□ -0.43
PDE4A-201ENST00000293683 Q96MF0 132 aa12.33□□□□□ -0.43
PDE4A-201ENST00000293683 F5H768 121 aa12.33□□□□□ -0.44
PDE4A-201ENST00000293683 K7EQD1 137 aa12.33□□□□□ -0.44
PDE4A-201ENST00000293683 CCDC168Q8NDH2 2452 aa12.33□□□□□ -0.44
PDE4A-201ENST00000293683 RPL36AP83881 106 aaKnown RBP12.32□□□□□ -0.44
PDE4A-201ENST00000293683 RPL36ALQ969Q0 106 aaKnown RBP12.32□□□□□ -0.44
PDE4A-201ENST00000293683 COX7A2LO14548 114 aa12.32□□□□□ -0.44
PDE4A-201ENST00000293683 DEFB121Q5J5C9 76 aa12.32□□□□□ -0.44
PDE4A-201ENST00000293683 Q6Q795 121 aa12.32□□□□□ -0.44
PDE4A-201ENST00000293683 UBR5O95071 2799 aaPredicted RBP12.31□□□□□ -0.44
PDE4A-201ENST00000293683 CDC42SE2Q9NRR3 84 aa12.31□□□□□ -0.44
PDE4A-201ENST00000293683 SHISA2Q6UWI4 295 aa12.3□□□□□ -0.44
PDE4A-201ENST00000293683 LOC100131303A0A0U1RQF7 123 aa12.3□□□□□ -0.44
PDE4A-201ENST00000293683 FAM218AQ96MZ4 157 aa12.3□□□□□ -0.44
PDE4A-201ENST00000293683 NOP10Q9NPE3 64 aaKnown RBP12.3□□□□□ -0.44
PDE4A-201ENST00000293683 BBC3Q96PG8 261 aaPredicted RBP12.29□□□□□ -0.44
PDE4A-201ENST00000293683 ITPR3Q14573 2671 aa12.29□□□□□ -0.44
PDE4A-201ENST00000293683 FAM240AA0A1B0GVK7 77 aa12.29□□□□□ -0.44
PDE4A-201ENST00000293683 FAM19A3Q7Z5A8 133 aa12.29□□□□□ -0.44
PDE4A-201ENST00000293683 WFDC10AQ9H1F0 79 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms