RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 USP9YO00507 2555 aaPredicted RBP13.81□□□□□ -0.2
LSM12-201ENST00000293406 HERVK_113P63121 156 aa13.81□□□□□ -0.2
LSM12-201ENST00000293406 Q9H8V8 135 aa13.81□□□□□ -0.2
LSM12-201ENST00000293406 DEFB114Q30KQ6 69 aa13.8□□□□□ -0.2
LSM12-201ENST00000293406 XCL2Q9UBD3 114 aa13.8□□□□□ -0.2
LSM12-201ENST00000293406 MXRA5Q9NR99 2828 aa13.8□□□□□ -0.2
LSM12-201ENST00000293406 IGLV5-39A0A0G2JS06 123 aa13.79□□□□□ -0.2
LSM12-201ENST00000293406 IGHV4-31P0DP07 118 aa13.79□□□□□ -0.2
LSM12-201ENST00000293406 LINC00242Q5T6M2 205 aa13.79□□□□□ -0.2
LSM12-201ENST00000293406 Q8N2B8 174 aa13.79□□□□□ -0.2
LSM12-201ENST00000293406 C15orf53Q8NAA6 179 aa13.79□□□□□ -0.2
LSM12-201ENST00000293406 CITED2Q99967 270 aaPredicted RBP13.79□□□□□ -0.2
LSM12-201ENST00000293406 LINC00308Q8TCZ7 52 aa13.79□□□□□ -0.2
LSM12-201ENST00000293406 ZNF625Q96I27 306 aaPredicted RBP13.78□□□□□ -0.2
LSM12-201ENST00000293406 NDUFV3P56181 108 aaKnown RBP13.78□□□□□ -0.2
LSM12-201ENST00000293406 LINC00694P0DN24 101 aa13.77□□□□□ -0.21
LSM12-201ENST00000293406 TTC32Q5I0X7 151 aa13.77□□□□□ -0.21
LSM12-201ENST00000293406 Q6Q795 121 aa13.77□□□□□ -0.21
LSM12-201ENST00000293406 ANKRD17O75179 2603 aaKnown RBP13.77□□□□□ -0.21
LSM12-201ENST00000293406 TRGV1A0A0A0MS02 117 aa13.76□□□□□ -0.21
LSM12-201ENST00000293406 A0A0U1RRA0 63 aa13.76□□□□□ -0.21
LSM12-201ENST00000293406 NHLRC4P0CG21 123 aaPredicted RBP13.76□□□□□ -0.21
LSM12-201ENST00000293406 HIST2H2BDQ6DRA6 164 aa13.76□□□□□ -0.21
LSM12-201ENST00000293406 NDUFA7O95182 113 aa13.75□□□□□ -0.21
LSM12-201ENST00000293406 SMIM1B2RUZ4 78 aa13.75□□□□□ -0.21
LSM12-201ENST00000293406 TRAV13-1A0A0B4J241 112 aa13.74□□□□□ -0.21
LSM12-201ENST00000293406 RPL36AP83881 106 aaKnown RBP13.74□□□□□ -0.21
LSM12-201ENST00000293406 GAGE5Q13069 117 aa13.74□□□□□ -0.21
LSM12-201ENST00000293406 GAGE6Q13070 117 aa13.74□□□□□ -0.21
LSM12-201ENST00000293406 DEFB121Q5J5C9 76 aa13.74□□□□□ -0.21
LSM12-201ENST00000293406 STHQ8IWL8 128 aa13.74□□□□□ -0.21
LSM12-201ENST00000293406 RPL36ALQ969Q0 106 aaKnown RBP13.74□□□□□ -0.21
LSM12-201ENST00000293406 ODF3L2Q3SX64 289 aa13.74□□□□□ -0.21
LSM12-201ENST00000293406 FAM19A3Q7Z5A8 133 aa13.74□□□□□ -0.21
LSM12-201ENST00000293406 C1orf158Q8N1D5 194 aa13.74□□□□□ -0.21
LSM12-201ENST00000293406 COPS9Q8WXC6 57 aa13.74□□□□□ -0.21
LSM12-201ENST00000293406 FAM240AA0A1B0GVK7 77 aa13.73□□□□□ -0.21
LSM12-201ENST00000293406 CSDC2Q9Y534 153 aaKnown RBP13.73□□□□□ -0.21
LSM12-201ENST00000293406 PRIMA1Q86XR5 153 aa13.73□□□□□ -0.21
LSM12-201ENST00000293406 IL17DQ8TAD2 202 aa13.73□□□□□ -0.21
LSM12-201ENST00000293406 FBN2P35556 2912 aa13.73□□□□□ -0.21
LSM12-201ENST00000293406 K7EQD1 137 aa13.72□□□□□ -0.21
LSM12-201ENST00000293406 MRPL23Q16540 153 aaKnown RBP13.72□□□□□ -0.21
LSM12-201ENST00000293406 MEIG1Q5JSS6 88 aa13.72□□□□□ -0.21
LSM12-201ENST00000293406 TRBV10-1A0A0K0K1A3 114 aa13.72□□□□□ -0.21
LSM12-201ENST00000293406 DAZ2Q13117 558 aaKnown RBP13.72□□□□□ -0.21
LSM12-201ENST00000293406 SOSTDC1Q6X4U4 206 aa13.72□□□□□ -0.21
LSM12-201ENST00000293406 NTM-AS1Q6ZSK4 140 aa13.72□□□□□ -0.21
LSM12-201ENST00000293406 DAZ4Q86SG3 579 aaKnown RBP13.72□□□□□ -0.21
LSM12-201ENST00000293406 DAZ3Q9NR90 486 aaKnown RBP13.72□□□□□ -0.21
LSM12-201ENST00000293406 POLQO75417 2590 aa13.72□□□□□ -0.21
LSM12-201ENST00000293406 COX7A2LO14548 114 aa13.71□□□□□ -0.21
LSM12-201ENST00000293406 Q6ZTI0 123 aa13.7□□□□□ -0.22
LSM12-201ENST00000293406 IGSF10Q6WRI0 2623 aa13.7□□□□□ -0.22
LSM12-201ENST00000293406 CDC42SE2Q9NRR3 84 aa13.69□□□□□ -0.22
LSM12-201ENST00000293406 MYO18BQ8IUG5 2567 aa13.68□□□□□ -0.22
LSM12-201ENST00000293406 GAGE12JA6NER3 117 aa13.68□□□□□ -0.22
LSM12-201ENST00000293406 GAGE4Q13068 117 aa13.68□□□□□ -0.22
LSM12-201ENST00000293406 SHISA2Q6UWI4 295 aa13.68□□□□□ -0.22
LSM12-201ENST00000293406 TRAV25A0A0B4J276 109 aa13.68□□□□□ -0.22
LSM12-201ENST00000293406 B5MCH6 92 aa13.68□□□□□ -0.22
LSM12-201ENST00000293406 F5H768 121 aa13.68□□□□□ -0.22
LSM12-201ENST00000293406 CR1P17927 2039 aa13.67□□□□□ -0.22
LSM12-201ENST00000293406 HERV-K104P63124 156 aa13.67□□□□□ -0.22
LSM12-201ENST00000293406 GAGE7O76087 117 aa13.66□□□□□ -0.22
LSM12-201ENST00000293406 GAGE12FP0CL80 117 aa13.66□□□□□ -0.22
LSM12-201ENST00000293406 GAGE12GP0CL81 117 aa13.66□□□□□ -0.22
LSM12-201ENST00000293406 GAGE12IP0CL82 117 aa13.66□□□□□ -0.22
LSM12-201ENST00000293406 SS18L2Q9UHA2 77 aa13.65□□□□□ -0.22
LSM12-201ENST00000293406 UBE2L6O14933 153 aa13.65□□□□□ -0.22
LSM12-201ENST00000293406 MYO9AB2RTY4 2548 aa13.65□□□□□ -0.22
LSM12-201ENST00000293406 ACACBO00763 2458 aa13.64□□□□□ -0.23
LSM12-201ENST00000293406 CCDC179H3BU77 68 aa13.63□□□□□ -0.23
LSM12-201ENST00000293406 TMEM243Q9BU79 118 aa13.63□□□□□ -0.23
LSM12-201ENST00000293406 NOP10Q9NPE3 64 aaKnown RBP13.63□□□□□ -0.23
LSM12-201ENST00000293406 PIEZO1Q92508 2521 aa13.63□□□□□ -0.23
LSM12-201ENST00000293406 A0A1W2PRX2 142 aa13.63□□□□□ -0.23
LSM12-201ENST00000293406 KRTAP10-9P60411 292 aa13.63□□□□□ -0.23
LSM12-201ENST00000293406 C11orf44Q8N8P7 122 aa13.63□□□□□ -0.23
LSM12-201ENST00000293406 Q96MF0 132 aa13.63□□□□□ -0.23
LSM12-201ENST00000293406 TEX15Q9BXT5 2789 aa13.62□□□□□ -0.23
LSM12-201ENST00000293406 CENPEQ02224 2701 aa13.62□□□□□ -0.23
LSM12-201ENST00000293406 TRACP01848 142 aa13.62□□□□□ -0.23
LSM12-201ENST00000293406 ACYP1P07311 99 aa13.62□□□□□ -0.23
LSM12-201ENST00000293406 DEFB113Q30KQ7 82 aa13.61□□□□□ -0.23
LSM12-201ENST00000293406 PPDPFQ9H3Y8 114 aa13.61□□□□□ -0.23
LSM12-201ENST00000293406 TRBV7-7A0A0K0K1E9 115 aa13.6□□□□□ -0.23
LSM12-201ENST00000293406 CHD6Q8TD26 2715 aa13.6□□□□□ -0.23
LSM12-201ENST00000293406 CCL24O00175 119 aa13.59□□□□□ -0.23
LSM12-201ENST00000293406 FAM208BQ5VWN6 2430 aa13.59□□□□□ -0.23
LSM12-201ENST00000293406 BAALC-AS2P0C853 105 aa13.59□□□□□ -0.23
LSM12-201ENST00000293406 TRGV2A0A075B6R0 118 aa13.58□□□□□ -0.24
LSM12-201ENST00000293406 HIST2H2BCQ6DN03 193 aa13.58□□□□□ -0.24
LSM12-201ENST00000293406 TMEM86BQ8N661 226 aa13.58□□□□□ -0.24
LSM12-201ENST00000293406 FAM218AQ96MZ4 157 aa13.58□□□□□ -0.24
LSM12-201ENST00000293406 CACNA1AO00555 2505 aa13.57□□□□□ -0.24
LSM12-201ENST00000293406 TRAV13-2A0A0B4J235 113 aa13.57□□□□□ -0.24
LSM12-201ENST00000293406 LOC100131303A0A0U1RQF7 123 aa13.57□□□□□ -0.24
LSM12-201ENST00000293406 PF4P02776 101 aa13.57□□□□□ -0.24
LSM12-201ENST00000293406 COX7B2Q8TF08 81 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms