RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 INAFM1C9JVW0 142 aa9.44□□□□□ -0.9
PTCD1-201ENST00000292478 CRYGDP07320 174 aa9.44□□□□□ -0.9
PTCD1-201ENST00000292478 LINC01006Q8NI28 216 aa9.44□□□□□ -0.9
PTCD1-201ENST00000292478 MRPS12O15235 138 aaKnown RBP9.44□□□□□ -0.9
PTCD1-201ENST00000292478 SONP18583 2426 aaKnown RBP9.44□□□□□ -0.9
PTCD1-201ENST00000292478 ATG2AQ2TAZ0 1938 aa9.43□□□□□ -0.9
PTCD1-201ENST00000292478 PTPRSQ13332 1948 aa9.43□□□□□ -0.9
PTCD1-201ENST00000292478 J3KT08 172 aa9.42□□□□□ -0.9
PTCD1-201ENST00000292478 ZNF580Q9UK33 172 aa9.42□□□□□ -0.9
PTCD1-201ENST00000292478 UBE2D4Q9Y2X8 147 aa9.42□□□□□ -0.9
PTCD1-201ENST00000292478 DSCAMO60469 2012 aa9.42□□□□□ -0.9
PTCD1-201ENST00000292478 COL5A1P20908 1838 aaPredicted RBP9.42□□□□□ -0.9
PTCD1-201ENST00000292478 PROK1P58294 105 aa9.42□□□□□ -0.9
PTCD1-201ENST00000292478 CD164L2Q6UWJ8 174 aa9.42□□□□□ -0.9
PTCD1-201ENST00000292478 MUC7Q8TAX7 377 aa9.42□□□□□ -0.9
PTCD1-201ENST00000292478 TNCP24821 2201 aa9.42□□□□□ -0.9
PTCD1-201ENST00000292478 TRIAP1O43715 76 aa9.42□□□□□ -0.9
PTCD1-201ENST00000292478 KIAA1549Q9HCM3 1950 aa9.41□□□□□ -0.9
PTCD1-201ENST00000292478 RBX1P62877 108 aa9.41□□□□□ -0.9
PTCD1-201ENST00000292478 C2orf91Q6ZV80 131 aa9.41□□□□□ -0.9
PTCD1-201ENST00000292478 BPY2O14599 106 aa9.4□□□□□ -0.9
PTCD1-201ENST00000292478 LY6G6DO95868 133 aa9.4□□□□□ -0.9
PTCD1-201ENST00000292478 COX8CQ7Z4L0 72 aa9.4□□□□□ -0.9
PTCD1-201ENST00000292478 TRAV10A0A0B4J240 114 aa9.4□□□□□ -0.91
PTCD1-201ENST00000292478 NDUFA7O95182 113 aa9.4□□□□□ -0.91
PTCD1-201ENST00000292478 WFDC9Q8NEX5 89 aa9.4□□□□□ -0.91
PTCD1-201ENST00000292478 HIVEP2P31629 2446 aa9.4□□□□□ -0.91
PTCD1-201ENST00000292478 LELP1Q5T871 98 aa9.39□□□□□ -0.91
PTCD1-201ENST00000292478 TEX49A0A1B0GTD5 131 aa9.39□□□□□ -0.91
PTCD1-201ENST00000292478 UPK3BQ9BT76 320 aa9.39□□□□□ -0.91
PTCD1-201ENST00000292478 CACNA1AO00555 2505 aa9.39□□□□□ -0.91
PTCD1-201ENST00000292478 UBE2D1P51668 147 aa9.39□□□□□ -0.91
PTCD1-201ENST00000292478 LINC00482Q8N8I6 264 aa9.39□□□□□ -0.91
PTCD1-201ENST00000292478 BBC3Q96PG8 261 aaPredicted RBP9.39□□□□□ -0.91
PTCD1-201ENST00000292478 SYCNQ0VAF6 134 aa9.38□□□□□ -0.91
PTCD1-201ENST00000292478 Q6ZS46 218 aa9.38□□□□□ -0.91
PTCD1-201ENST00000292478 BDP1A6H8Y1 2624 aa9.38□□□□□ -0.91
PTCD1-201ENST00000292478 COX17Q14061 63 aa9.38□□□□□ -0.91
PTCD1-201ENST00000292478 MYO18BQ8IUG5 2567 aa9.38□□□□□ -0.91
PTCD1-201ENST00000292478 ACACBO00763 2458 aa9.37□□□□□ -0.91
PTCD1-201ENST00000292478 UBE2D3P61077 147 aa9.37□□□□□ -0.91
PTCD1-201ENST00000292478 UBE2D2P62837 147 aa9.37□□□□□ -0.91
PTCD1-201ENST00000292478 CDSNQ15517 529 aa9.37□□□□□ -0.91
PTCD1-201ENST00000292478 OTOGLQ3ZCN5 2332 aa9.37□□□□□ -0.91
PTCD1-201ENST00000292478 LINC00959A0A1B0GUT2 108 aa9.37□□□□□ -0.91
PTCD1-201ENST00000292478 IGKV2-24A0A0C4DH68 120 aa9.37□□□□□ -0.91
PTCD1-201ENST00000292478 Q8N976 141 aa9.37□□□□□ -0.91
PTCD1-201ENST00000292478 K7ERS5 55 aa9.36□□□□□ -0.91
PTCD1-201ENST00000292478 NDUFV3P56181 108 aaKnown RBP9.36□□□□□ -0.91
PTCD1-201ENST00000292478 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
PTCD1-201ENST00000292478 C18orf65Q6ZTR6 163 aa9.36□□□□□ -0.91
PTCD1-201ENST00000292478 TRAV23DV6A0A075B6W5 121 aa9.35□□□□□ -0.91
PTCD1-201ENST00000292478 H0Y9J4 135 aa9.35□□□□□ -0.91
PTCD1-201ENST00000292478 LST1O00453 97 aa9.35□□□□□ -0.91
PTCD1-201ENST00000292478 UQCRQO14949 82 aa9.35□□□□□ -0.91
PTCD1-201ENST00000292478 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
PTCD1-201ENST00000292478 M0R378 163 aa9.34□□□□□ -0.91
PTCD1-201ENST00000292478 FAM19A1Q7Z5A9 133 aa9.34□□□□□ -0.91
PTCD1-201ENST00000292478 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
PTCD1-201ENST00000292478 HCFC1P51610 2035 aa9.34□□□□□ -0.91
PTCD1-201ENST00000292478 NDUFC2O95298 119 aa9.34□□□□□ -0.91
PTCD1-201ENST00000292478 MT-ATP8P03928 68 aa9.34□□□□□ -0.91
PTCD1-201ENST00000292478 C6orf99Q4VX62 202 aa9.34□□□□□ -0.91
PTCD1-201ENST00000292478 CDC42SE2Q9NRR3 84 aa9.34□□□□□ -0.91
PTCD1-201ENST00000292478 AVPP01185 164 aa9.34□□□□□ -0.91
PTCD1-201ENST00000292478 Q8IZM0 81 aa9.34□□□□□ -0.91
PTCD1-201ENST00000292478 RNF183Q96D59 192 aa9.34□□□□□ -0.91
PTCD1-201ENST00000292478 IMUPQ9GZP8 106 aa9.33□□□□□ -0.92
PTCD1-201ENST00000292478 CASC2Q6XLA1 102 aa9.33□□□□□ -0.92
PTCD1-201ENST00000292478 IGLV4-69A0A075B6H9 119 aa9.33□□□□□ -0.92
PTCD1-201ENST00000292478 LINC00310P59036 64 aa9.33□□□□□ -0.92
PTCD1-201ENST00000292478 KPRPQ5T749 579 aaPredicted RBP9.33□□□□□ -0.92
PTCD1-201ENST00000292478 DHRS4-AS1Q9P1J3 65 aa9.33□□□□□ -0.92
PTCD1-201ENST00000292478 GAS8-AS1O95177 125 aa9.32□□□□□ -0.92
PTCD1-201ENST00000292478 URB1-AS1Q96HZ7 61 aa9.32□□□□□ -0.92
PTCD1-201ENST00000292478 SLPIP03973 132 aa9.31□□□□□ -0.92
PTCD1-201ENST00000292478 XAGE1AQ9HD64 81 aa9.31□□□□□ -0.92
PTCD1-201ENST00000292478 CLUHP3Q96NS8 147 aa9.31□□□□□ -0.92
PTCD1-201ENST00000292478 CHCHD7Q9BUK0 85 aa9.31□□□□□ -0.92
PTCD1-201ENST00000292478 A8MZ25 164 aa9.31□□□□□ -0.92
PTCD1-201ENST00000292478 ODF3L2Q3SX64 289 aa9.31□□□□□ -0.92
PTCD1-201ENST00000292478 SDIM1Q6ZPB5 146 aa9.31□□□□□ -0.92
PTCD1-201ENST00000292478 LOC100131303A0A0U1RQF7 123 aa9.3□□□□□ -0.92
PTCD1-201ENST00000292478 SPG11Q96JI7 2443 aa9.3□□□□□ -0.92
PTCD1-201ENST00000292478 PRR14LQ5THK1 2151 aa9.29□□□□□ -0.92
PTCD1-201ENST00000292478 WFDC10AQ9H1F0 79 aa9.29□□□□□ -0.92
PTCD1-201ENST00000292478 C16orf95Q9H693 158 aa9.29□□□□□ -0.92
PTCD1-201ENST00000292478 CPAMD8Q8IZJ3 1885 aa9.29□□□□□ -0.92
PTCD1-201ENST00000292478 A0A087WZ39 114 aa9.29□□□□□ -0.92
PTCD1-201ENST00000292478 SORL1Q92673 2214 aa9.29□□□□□ -0.92
PTCD1-201ENST00000292478 IGLV1-51P01701 117 aa9.29□□□□□ -0.92
PTCD1-201ENST00000292478 PLA2G2AP14555 144 aa9.28□□□□□ -0.92
PTCD1-201ENST00000292478 FAM19A5Q7Z5A7 132 aaPredicted RBP9.28□□□□□ -0.92
PTCD1-201ENST00000292478 CUL9Q8IWT3 2517 aa9.28□□□□□ -0.92
PTCD1-201ENST00000292478 C3orf22Q8N5N4 141 aa9.28□□□□□ -0.92
PTCD1-201ENST00000292478 SMIM11BQ8TCY0 68 aa9.28□□□□□ -0.92
PTCD1-201ENST00000292478 IGKV4-1P06312 121 aa9.28□□□□□ -0.92
PTCD1-201ENST00000292478 ENHOQ6UWT2 76 aa9.28□□□□□ -0.92
PTCD1-201ENST00000292478 LOC107984640A0A0U1RRK4 108 aa9.27□□□□□ -0.92
PTCD1-201ENST00000292478 LINC00242Q5T6M2 205 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms