RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 MAP6D1Q9H9H5 199 aa14.65□□□□□ -0.06
TMED4-201ENST00000289577 A0A096LNT2 108 aa14.65□□□□□ -0.06
TMED4-201ENST00000289577 SPG11Q96JI7 2443 aa14.64□□□□□ -0.07
TMED4-201ENST00000289577 Q6YL49 198 aa14.64□□□□□ -0.07
TMED4-201ENST00000289577 COX7A2LO14548 114 aa14.63□□□□□ -0.07
TMED4-201ENST00000289577 INSP01308 110 aa14.63□□□□□ -0.07
TMED4-201ENST00000289577 SHISA2Q6UWI4 295 aa14.62□□□□□ -0.07
TMED4-201ENST00000289577 CELSR2Q9HCU4 2923 aa14.62□□□□□ -0.07
TMED4-201ENST00000289577 TRBV7-7A0A0K0K1E9 115 aa14.62□□□□□ -0.07
TMED4-201ENST00000289577 SOSTDC1Q6X4U4 206 aa14.62□□□□□ -0.07
TMED4-201ENST00000289577 PEMTQ9UBM1 199 aa14.62□□□□□ -0.07
TMED4-201ENST00000289577 SMIM1B2RUZ4 78 aa14.61□□□□□ -0.07
TMED4-201ENST00000289577 FSHBP01225 129 aa14.61□□□□□ -0.07
TMED4-201ENST00000289577 ITPR1Q14643 2758 aa14.61□□□□□ -0.07
TMED4-201ENST00000289577 COPS9Q8WXC6 57 aa14.61□□□□□ -0.07
TMED4-201ENST00000289577 NCOR2Q9Y618 2525 aa14.61□□□□□ -0.07
TMED4-201ENST00000289577 NRGNQ92686 78 aa14.61□□□□□ -0.07
TMED4-201ENST00000289577 CSDC2Q9Y534 153 aaKnown RBP14.6□□□□□ -0.07
TMED4-201ENST00000289577 CREBBPQ92793 2442 aa14.6□□□□□ -0.07
TMED4-201ENST00000289577 LINC00694P0DN24 101 aa14.6□□□□□ -0.07
TMED4-201ENST00000289577 ZNF625Q96I27 306 aaPredicted RBP14.6□□□□□ -0.07
TMED4-201ENST00000289577 ACYP1P07311 99 aa14.59□□□□□ -0.07
TMED4-201ENST00000289577 MAP1AP78559 2803 aaPredicted RBP14.58□□□□□ -0.08
TMED4-201ENST00000289577 Q8N2B8 174 aa14.58□□□□□ -0.08
TMED4-201ENST00000289577 IL17DQ8TAD2 202 aa14.58□□□□□ -0.08
TMED4-201ENST00000289577 PPDPFQ9H3Y8 114 aa14.57□□□□□ -0.08
TMED4-201ENST00000289577 CHD8Q9HCK8 2581 aa14.57□□□□□ -0.08
TMED4-201ENST00000289577 DEFB114Q30KQ6 69 aa14.57□□□□□ -0.08
TMED4-201ENST00000289577 A0A0U1RRA0 63 aa14.56□□□□□ -0.08
TMED4-201ENST00000289577 F5H768 121 aa14.56□□□□□ -0.08
TMED4-201ENST00000289577 NDUFA7O95182 113 aa14.56□□□□□ -0.08
TMED4-201ENST00000289577 TRACP01848 142 aa14.56□□□□□ -0.08
TMED4-201ENST00000289577 DYNLRB2Q8TF09 96 aa14.56□□□□□ -0.08
TMED4-201ENST00000289577 C4orf3Q8WVX3 66 aa14.56□□□□□ -0.08
TMED4-201ENST00000289577 NTM-AS1Q6ZSK4 140 aa14.55□□□□□ -0.08
TMED4-201ENST00000289577 PRIMA1Q86XR5 153 aa14.55□□□□□ -0.08
TMED4-201ENST00000289577 MAPK1IP1LQ8NDC0 245 aa14.55□□□□□ -0.08
TMED4-201ENST00000289577 SPTBN4Q9H254 2564 aa14.55□□□□□ -0.08
TMED4-201ENST00000289577 TRBV10-1A0A0K0K1A3 114 aa14.54□□□□□ -0.08
TMED4-201ENST00000289577 HERV-K104P63124 156 aa14.54□□□□□ -0.08
TMED4-201ENST00000289577 XCL2Q9UBD3 114 aa14.54□□□□□ -0.08
TMED4-201ENST00000289577 TRAV13-1A0A0B4J241 112 aa14.53□□□□□ -0.08
TMED4-201ENST00000289577 DAZ2Q13117 558 aaKnown RBP14.53□□□□□ -0.08
TMED4-201ENST00000289577 DAZ4Q86SG3 579 aaKnown RBP14.53□□□□□ -0.08
TMED4-201ENST00000289577 IMUPQ9GZP8 106 aa14.53□□□□□ -0.08
TMED4-201ENST00000289577 DAZ3Q9NR90 486 aaKnown RBP14.53□□□□□ -0.08
TMED4-201ENST00000289577 CDC42SE2Q9NRR3 84 aa14.53□□□□□ -0.08
TMED4-201ENST00000289577 RPL36AP83881 106 aaKnown RBP14.53□□□□□ -0.08
TMED4-201ENST00000289577 MEIG1Q5JSS6 88 aa14.53□□□□□ -0.08
TMED4-201ENST00000289577 C1orf158Q8N1D5 194 aa14.53□□□□□ -0.08
TMED4-201ENST00000289577 RPL36ALQ969Q0 106 aaKnown RBP14.53□□□□□ -0.08
TMED4-201ENST00000289577 TRGV1A0A0A0MS02 117 aa14.51□□□□□ -0.09
TMED4-201ENST00000289577 K7EQD1 137 aa14.51□□□□□ -0.09
TMED4-201ENST00000289577 C22orf24Q9Y442 160 aa14.51□□□□□ -0.09
TMED4-201ENST00000289577 ODF3L2Q3SX64 289 aa14.5□□□□□ -0.09
TMED4-201ENST00000289577 SDIM1Q6ZPB5 146 aa14.5□□□□□ -0.09
TMED4-201ENST00000289577 DOPEY1Q5JWR5 2465 aa14.5□□□□□ -0.09
TMED4-201ENST00000289577 CHCHD5Q9BSY4 110 aa14.5□□□□□ -0.09
TMED4-201ENST00000289577 BAALC-AS2P0C853 105 aa14.49□□□□□ -0.09
TMED4-201ENST00000289577 SMCR5Q8TEV8 140 aa14.49□□□□□ -0.09
TMED4-201ENST00000289577 FAM222AQ5U5X8 452 aa14.49□□□□□ -0.09
TMED4-201ENST00000289577 Q96MF0 132 aa14.49□□□□□ -0.09
TMED4-201ENST00000289577 FAM218AQ96MZ4 157 aa14.49□□□□□ -0.09
TMED4-201ENST00000289577 IGHV4-31P0DP07 118 aa14.47□□□□□ -0.09
TMED4-201ENST00000289577 LINC00643Q86TS7 51 aa14.47□□□□□ -0.09
TMED4-201ENST00000289577 Q6ZTI0 123 aa14.47□□□□□ -0.09
TMED4-201ENST00000289577 PF4P02776 101 aa14.46□□□□□ -0.09
TMED4-201ENST00000289577 HIST2H2BCQ6DN03 193 aa14.46□□□□□ -0.09
TMED4-201ENST00000289577 HIST2H2BDQ6DRA6 164 aa14.46□□□□□ -0.09
TMED4-201ENST00000289577 KHDC1LQ5JSQ8 128 aa14.46□□□□□ -0.1
TMED4-201ENST00000289577 STHQ8IWL8 128 aa14.46□□□□□ -0.1
TMED4-201ENST00000289577 RPL28P46779 137 aaKnown RBP14.45□□□□□ -0.1
TMED4-201ENST00000289577 TRAV25A0A0B4J276 109 aa14.44□□□□□ -0.1
TMED4-201ENST00000289577 TRAV13-2A0A0B4J235 113 aa14.43□□□□□ -0.1
TMED4-201ENST00000289577 CSMD2Q7Z408 3487 aa14.43□□□□□ -0.1
TMED4-201ENST00000289577 FAM236AA0A1B0GUQ0 79 aa14.43□□□□□ -0.1
TMED4-201ENST00000289577 FAM236BA0A1B0GV22 79 aa14.43□□□□□ -0.1
TMED4-201ENST00000289577 TMEM243Q9BU79 118 aa14.43□□□□□ -0.1
TMED4-201ENST00000289577 ZANQ9Y493 2812 aa14.42□□□□□ -0.1
TMED4-201ENST00000289577 USP9YO00507 2555 aaPredicted RBP14.42□□□□□ -0.1
TMED4-201ENST00000289577 MXRA5Q9NR99 2828 aa14.42□□□□□ -0.1
TMED4-201ENST00000289577 USP9XQ93008 2570 aaPredicted RBP14.41□□□□□ -0.1
TMED4-201ENST00000289577 INAFM2P0DMQ5 153 aa14.41□□□□□ -0.1
TMED4-201ENST00000289577 CR1P17927 2039 aa14.4□□□□□ -0.1
TMED4-201ENST00000289577 CFAP46Q8IYW2 2715 aa14.4□□□□□ -0.1
TMED4-201ENST00000289577 UBE2L6O14933 153 aa14.4□□□□□ -0.1
TMED4-201ENST00000289577 LINC00337Q8N6G1 96 aa14.4□□□□□ -0.1
TMED4-201ENST00000289577 IGKV2-28A0A075B6P5 120 aa14.39□□□□□ -0.11
TMED4-201ENST00000289577 IGKV2D-28P01615 120 aa14.39□□□□□ -0.11
TMED4-201ENST00000289577 CRPP02741 224 aa14.39□□□□□ -0.11
TMED4-201ENST00000289577 COX7B2Q8TF08 81 aa14.39□□□□□ -0.11
TMED4-201ENST00000289577 MALP21145 153 aa14.39□□□□□ -0.11
TMED4-201ENST00000289577 MIR7-3HGQ8N6C7 128 aa14.39□□□□□ -0.11
TMED4-201ENST00000289577 FAM110AQ9BQ89 295 aa14.39□□□□□ -0.11
TMED4-201ENST00000289577 FLNCQ14315 2725 aa14.38□□□□□ -0.11
TMED4-201ENST00000289577 PKD1L2Q7Z442 2459 aa14.38□□□□□ -0.11
TMED4-201ENST00000289577 NOP10Q9NPE3 64 aaKnown RBP14.38□□□□□ -0.11
TMED4-201ENST00000289577 CXCL5P42830 114 aa14.37□□□□□ -0.11
TMED4-201ENST00000289577 C5orf38Q86SI9 138 aa14.37□□□□□ -0.11
TMED4-201ENST00000289577 Q9HAA7 133 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms