RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 GAS8-AS1O95177 125 aa8.51□□□□□ -1.05
NPC1L1-201ENST00000289547 Q6ZS46 218 aa8.5□□□□□ -1.05
NPC1L1-201ENST00000289547 RMI2Q96E14 147 aa8.5□□□□□ -1.05
NPC1L1-201ENST00000289547 A0A096LPF7 62 aa8.5□□□□□ -1.05
NPC1L1-201ENST00000289547 USP17L23D6RBM5 183 aa8.5□□□□□ -1.05
NPC1L1-201ENST00000289547 MDFICQ9P1T7 246 aa8.5□□□□□ -1.05
NPC1L1-201ENST00000289547 ANGP03950 147 aaKnown RBP8.49□□□□□ -1.05
NPC1L1-201ENST00000289547 WDR87Q6ZQQ6 2873 aa8.49□□□□□ -1.05
NPC1L1-201ENST00000289547 TMEM223A0PJW6 202 aa8.49□□□□□ -1.05
NPC1L1-201ENST00000289547 RPL18AQ02543 176 aaKnown RBP8.49□□□□□ -1.05
NPC1L1-201ENST00000289547 NREPQ16612 68 aa8.49□□□□□ -1.05
NPC1L1-201ENST00000289547 HIVEP3Q5T1R4 2406 aa8.49□□□□□ -1.05
NPC1L1-201ENST00000289547 A0A0C4DFX4 3053 aa8.49□□□□□ -1.05
NPC1L1-201ENST00000289547 IGHV4-28A0A0C4DH34 117 aa8.49□□□□□ -1.05
NPC1L1-201ENST00000289547 CDK2AP2O75956 126 aa8.49□□□□□ -1.05
NPC1L1-201ENST00000289547 NKAPP1Q8N9T2 125 aa8.49□□□□□ -1.05
NPC1L1-201ENST00000289547 DEFB105AQ8NG35 78 aa8.48□□□□□ -1.05
NPC1L1-201ENST00000289547 TMEM256-PLSCR3K7ERE1 68 aa8.48□□□□□ -1.05
NPC1L1-201ENST00000289547 CCDC140Q96MF4 163 aa8.48□□□□□ -1.05
NPC1L1-201ENST00000289547 BPTFQ12830 3046 aa8.48□□□□□ -1.05
NPC1L1-201ENST00000289547 ENHOQ6UWT2 76 aa8.48□□□□□ -1.05
NPC1L1-201ENST00000289547 NOP10Q9NPE3 64 aaKnown RBP8.47□□□□□ -1.05
NPC1L1-201ENST00000289547 CDKN2A-AS1Q9UH64 79 aa8.47□□□□□ -1.05
NPC1L1-201ENST00000289547 LST1O00453 97 aa8.47□□□□□ -1.05
NPC1L1-201ENST00000289547 MYO18BQ8IUG5 2567 aa8.47□□□□□ -1.05
NPC1L1-201ENST00000289547 NDUFC2-KCTD14E9PQ53 114 aa8.46□□□□□ -1.05
NPC1L1-201ENST00000289547 DEFB135Q30KP9 77 aa8.46□□□□□ -1.05
NPC1L1-201ENST00000289547 DEFB114Q30KQ6 69 aa8.46□□□□□ -1.05
NPC1L1-201ENST00000289547 NRACQ8N912 160 aa8.46□□□□□ -1.05
NPC1L1-201ENST00000289547 H7C423 109 aa8.46□□□□□ -1.05
NPC1L1-201ENST00000289547 EPG5Q9HCE0 2579 aa8.46□□□□□ -1.05
NPC1L1-201ENST00000289547 CRIP2P52943 208 aaPredicted RBP8.46□□□□□ -1.06
NPC1L1-201ENST00000289547 UNQ9165/PRO28630Q6UXU0 137 aa8.46□□□□□ -1.06
NPC1L1-201ENST00000289547 LINC00308Q8TCZ7 52 aa8.46□□□□□ -1.06
NPC1L1-201ENST00000289547 FAM240AA0A1B0GVK7 77 aa8.46□□□□□ -1.06
NPC1L1-201ENST00000289547 CCL18P55774 89 aa8.46□□□□□ -1.06
NPC1L1-201ENST00000289547 FAM19A5Q7Z5A7 132 aaPredicted RBP8.46□□□□□ -1.06
NPC1L1-201ENST00000289547 IGLV4-3A0A075B6K6 122 aa8.45□□□□□ -1.06
NPC1L1-201ENST00000289547 FUSP35637 526 aaKnown RBP eCLIP8.45□□□□□ -1.06
NPC1L1-201ENST00000289547 SLPIP03973 132 aa8.45□□□□□ -1.06
NPC1L1-201ENST00000289547 NCR3O14931 201 aa8.45□□□□□ -1.06
NPC1L1-201ENST00000289547 UBE2D1P51668 147 aa8.45□□□□□ -1.06
NPC1L1-201ENST00000289547 CDIP1Q9H305 208 aa8.45□□□□□ -1.06
NPC1L1-201ENST00000289547 MAP6D1Q9H9H5 199 aa8.45□□□□□ -1.06
NPC1L1-201ENST00000289547 MRPL55Q7Z7F7 128 aaKnown RBP8.45□□□□□ -1.06
NPC1L1-201ENST00000289547 IGLV1-40P01703 118 aa8.44□□□□□ -1.06
NPC1L1-201ENST00000289547 SPTSSBQ8NFR3 76 aa8.44□□□□□ -1.06
NPC1L1-201ENST00000289547 TMEM263Q8WUH6 116 aaKnown RBP8.44□□□□□ -1.06
NPC1L1-201ENST00000289547 PPDPFQ9H3Y8 114 aa8.44□□□□□ -1.06
NPC1L1-201ENST00000289547 FASNP49327 2511 aaKnown RBP8.44□□□□□ -1.06
NPC1L1-201ENST00000289547 TIRAPP58753 221 aa8.44□□□□□ -1.06
NPC1L1-201ENST00000289547 A0A096LNJ9 63 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 ZNF580Q9UK33 172 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 AGRNO00468 2067 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 IGLV10-54A0A075B6I4 117 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 UBE2D3P61077 147 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 UBE2D2P62837 147 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 PIK3CD-AS1Q5SR53 167 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 A8MZ25 164 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 MP68P56378 58 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 LINC00526Q96FQ7 95 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 HTTP42858 3142 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 LOC107984640A0A0U1RRK4 108 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 K7EQD1 137 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 ATP5EP2Q5VTU8 51 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 C10orf99Q6UWK7 81 aa8.43□□□□□ -1.06
NPC1L1-201ENST00000289547 C1orf195Q5TG92 126 aa8.42□□□□□ -1.06
NPC1L1-201ENST00000289547 SNURFQ9Y675 71 aa8.42□□□□□ -1.06
NPC1L1-201ENST00000289547 PCSK5Q92824 1860 aa8.42□□□□□ -1.06
NPC1L1-201ENST00000289547 SCXQ7RTU7 201 aa8.41□□□□□ -1.06
NPC1L1-201ENST00000289547 C11orf45Q8TAV5 145 aa8.41□□□□□ -1.06
NPC1L1-201ENST00000289547 C11orf21Q9P2W6 132 aa8.41□□□□□ -1.06
NPC1L1-201ENST00000289547 PDE6GP18545 87 aa8.41□□□□□ -1.06
NPC1L1-201ENST00000289547 CSDC2Q9Y534 153 aaKnown RBP8.41□□□□□ -1.06
NPC1L1-201ENST00000289547 CXCL5P42830 114 aa8.4□□□□□ -1.06
NPC1L1-201ENST00000289547 HIGD2BQ4VC39 106 aa8.4□□□□□ -1.06
NPC1L1-201ENST00000289547 MYO9AB2RTY4 2548 aa8.4□□□□□ -1.06
NPC1L1-201ENST00000289547 A0A0J9YX75 114 aa8.4□□□□□ -1.06
NPC1L1-201ENST00000289547 TIMM17BO60830 172 aa8.4□□□□□ -1.07
NPC1L1-201ENST00000289547 RAI1Q7Z5J4 1906 aaPredicted RBP8.39□□□□□ -1.07
NPC1L1-201ENST00000289547 SONP18583 2426 aaKnown RBP8.39□□□□□ -1.07
NPC1L1-201ENST00000289547 F8W735 103 aaPredicted RBP8.39□□□□□ -1.07
NPC1L1-201ENST00000289547 ZFAND2AQ8N6M9 145 aa8.39□□□□□ -1.07
NPC1L1-201ENST00000289547 ZFYVE26Q68DK2 2539 aa8.39□□□□□ -1.07
NPC1L1-201ENST00000289547 LINC00467Q9BRT7 94 aa8.39□□□□□ -1.07
NPC1L1-201ENST00000289547 TRBV27A0A0K0K1C4 114 aa8.39□□□□□ -1.07
NPC1L1-201ENST00000289547 K7EQG2 157 aa8.38□□□□□ -1.07
NPC1L1-201ENST00000289547 NDUFA1O15239 70 aa8.38□□□□□ -1.07
NPC1L1-201ENST00000289547 H3BQ85 93 aa8.38□□□□□ -1.07
NPC1L1-201ENST00000289547 M0QY20 66 aa8.38□□□□□ -1.07
NPC1L1-201ENST00000289547 DOPEY1Q5JWR5 2465 aa8.38□□□□□ -1.07
NPC1L1-201ENST00000289547 SMIM26A0A096LP01 95 aa8.37□□□□□ -1.07
NPC1L1-201ENST00000289547 CNFNQ9BYD5 112 aa8.37□□□□□ -1.07
NPC1L1-201ENST00000289547 C20orf173Q96LM9 149 aa8.37□□□□□ -1.07
NPC1L1-201ENST00000289547 ODF3Q96PU9 254 aa8.37□□□□□ -1.07
NPC1L1-201ENST00000289547 A0A087WVE0 104 aa8.37□□□□□ -1.07
NPC1L1-201ENST00000289547 BPY2O14599 106 aa8.37□□□□□ -1.07
NPC1L1-201ENST00000289547 MIFP14174 115 aa8.37□□□□□ -1.07
NPC1L1-201ENST00000289547 GYPEP15421 78 aa8.36□□□□□ -1.07
NPC1L1-201ENST00000289547 OXLD1Q5BKU9 147 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms