RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 FGF6P10767 208 aa12.98□□□□□ -0.33
PDLIM3-202ENST00000284770 TCTAP57738 103 aa12.98□□□□□ -0.33
PDLIM3-202ENST00000284770 GAGE6Q13070 117 aa12.98□□□□□ -0.33
PDLIM3-202ENST00000284770 MRPL52Q86TS9 123 aaKnown RBP12.98□□□□□ -0.33
PDLIM3-202ENST00000284770 PRSS29PA6NIE9 313 aa12.97□□□□□ -0.33
PDLIM3-202ENST00000284770 SMAGPQ0VAQ4 97 aa12.97□□□□□ -0.33
PDLIM3-202ENST00000284770 ZC2HC1BQ5TFG8 222 aa12.97□□□□□ -0.33
PDLIM3-202ENST00000284770 MRPL35Q9NZE8 188 aaKnown RBP12.97□□□□□ -0.33
PDLIM3-202ENST00000284770 DNAH7Q8WXX0 4024 aa12.97□□□□□ -0.33
PDLIM3-202ENST00000284770 TRAV8-6A0A0B4J262 113 aa12.97□□□□□ -0.33
PDLIM3-202ENST00000284770 CCL18P55774 89 aa12.97□□□□□ -0.33
PDLIM3-202ENST00000284770 PMVKQ15126 192 aa12.97□□□□□ -0.33
PDLIM3-202ENST00000284770 ZFAND6Q6FIF0 208 aa12.97□□□□□ -0.33
PDLIM3-202ENST00000284770 CSDC2Q9Y534 153 aaKnown RBP12.97□□□□□ -0.33
PDLIM3-202ENST00000284770 TMEM262E9PQX1 116 aa12.96□□□□□ -0.34
PDLIM3-202ENST00000284770 MAJINQ3KP22 176 aa12.96□□□□□ -0.34
PDLIM3-202ENST00000284770 AMMECR1LQ6DCA0 310 aa12.96□□□□□ -0.34
PDLIM3-202ENST00000284770 VAMP8Q9BV40 100 aa12.96□□□□□ -0.34
PDLIM3-202ENST00000284770 CST9LQ9H4G1 147 aa12.96□□□□□ -0.34
PDLIM3-202ENST00000284770 TRAV9-2A0A087WT02 112 aa12.95□□□□□ -0.34
PDLIM3-202ENST00000284770 F8VRH5 84 aa12.95□□□□□ -0.34
PDLIM3-202ENST00000284770 ZNF664Q8N3J9 261 aa12.95□□□□□ -0.34
PDLIM3-202ENST00000284770 AMELXQ99217 191 aa12.95□□□□□ -0.34
PDLIM3-202ENST00000284770 CHTOPQ9Y3Y2 248 aaKnown RBP12.95□□□□□ -0.34
PDLIM3-202ENST00000284770 CSMD3Q7Z407 3707 aa12.95□□□□□ -0.34
PDLIM3-202ENST00000284770 ZNF25P17030 456 aaPredicted RBP12.94□□□□□ -0.34
PDLIM3-202ENST00000284770 MRPS36P82909 103 aaKnown RBP12.94□□□□□ -0.34
PDLIM3-202ENST00000284770 PAPPA-AS1Q5QFB9 102 aa12.94□□□□□ -0.34
PDLIM3-202ENST00000284770 DGAT2L7PQ6IED9 249 aa12.94□□□□□ -0.34
PDLIM3-202ENST00000284770 LINC00588Q9Y4M8 146 aa12.94□□□□□ -0.34
PDLIM3-202ENST00000284770 DYNC2H1Q8NCM8 4307 aaKnown RBP12.94□□□□□ -0.34
PDLIM3-202ENST00000284770 A0A1B0GUV1 79 aa12.94□□□□□ -0.34
PDLIM3-202ENST00000284770 PKIAP61925 76 aa12.94□□□□□ -0.34
PDLIM3-202ENST00000284770 Q6ZUT4 128 aa12.94□□□□□ -0.34
PDLIM3-202ENST00000284770 PAM16Q9Y3D7 125 aa12.94□□□□□ -0.34
PDLIM3-202ENST00000284770 DPM2O94777 84 aa12.93□□□□□ -0.34
PDLIM3-202ENST00000284770 OR5A1Q8NGJ0 315 aa12.93□□□□□ -0.34
PDLIM3-202ENST00000284770 TMEM101Q96IK0 257 aa12.93□□□□□ -0.34
PDLIM3-202ENST00000284770 VCX2Q9H322 139 aa12.93□□□□□ -0.34
PDLIM3-202ENST00000284770 MRPS16Q9Y3D3 137 aaKnown RBP12.93□□□□□ -0.34
PDLIM3-202ENST00000284770 hDV102S1A0JD36 115 aa12.92□□□□□ -0.34
PDLIM3-202ENST00000284770 IGKCP01834 107 aa12.92□□□□□ -0.34
PDLIM3-202ENST00000284770 MPV17L2Q567V2 206 aa12.92□□□□□ -0.34
PDLIM3-202ENST00000284770 WFDC10BQ8IUB3 73 aa12.92□□□□□ -0.34
PDLIM3-202ENST00000284770 IGLV4-69A0A075B6H9 119 aa12.92□□□□□ -0.34
PDLIM3-202ENST00000284770 PLNP26678 52 aa12.92□□□□□ -0.34
PDLIM3-202ENST00000284770 RBX1P62877 108 aa12.92□□□□□ -0.34
PDLIM3-202ENST00000284770 CDC42SE2Q9NRR3 84 aa12.92□□□□□ -0.34
PDLIM3-202ENST00000284770 IGLV4-60A0A075B6I1 120 aa12.91□□□□□ -0.34
PDLIM3-202ENST00000284770 RNASE13Q5GAN3 156 aaKnown RBP12.91□□□□□ -0.34
PDLIM3-202ENST00000284770 SPATA45Q537H7 98 aa12.9□□□□□ -0.34
PDLIM3-202ENST00000284770 Q8N3U1 123 aa12.89□□□□□ -0.35
PDLIM3-202ENST00000284770 UPK3BQ9BT76 320 aa12.89□□□□□ -0.35
PDLIM3-202ENST00000284770 PRO1933Q9H354 126 aa12.89□□□□□ -0.35
PDLIM3-202ENST00000284770 STPG4Q8N801 248 aa12.88□□□□□ -0.35
PDLIM3-202ENST00000284770 C11orf86A6NJI1 115 aa12.87□□□□□ -0.35
PDLIM3-202ENST00000284770 HSBP1L1C9JCN9 74 aa12.86□□□□□ -0.35
PDLIM3-202ENST00000284770 NFE4Q86UQ8 179 aa12.86□□□□□ -0.35
PDLIM3-202ENST00000284770 C3orf84H3BNL1 204 aa12.86□□□□□ -0.35
PDLIM3-202ENST00000284770 SIVA1O15304 175 aa12.86□□□□□ -0.35
PDLIM3-202ENST00000284770 IGLC3P0DOY3 106 aa12.86□□□□□ -0.35
PDLIM3-202ENST00000284770 ANKRD39Q53RE8 183 aa12.86□□□□□ -0.35
PDLIM3-202ENST00000284770 LINC01556Q5JQF7 62 aa12.86□□□□□ -0.35
PDLIM3-202ENST00000284770 CASC10Q5T4H9 136 aa12.86□□□□□ -0.35
PDLIM3-202ENST00000284770 UBE2DNLQ8IWF7 75 aa12.86□□□□□ -0.35
PDLIM3-202ENST00000284770 STARD9Q9P2P6 4700 aa12.85□□□□□ -0.35
PDLIM3-202ENST00000284770 A0A0J9YXV3 536 aa12.85□□□□□ -0.35
PDLIM3-202ENST00000284770 IGHV3-30P01768 117 aa12.85□□□□□ -0.35
PDLIM3-202ENST00000284770 IGHV3-33P01772 117 aa12.85□□□□□ -0.35
PDLIM3-202ENST00000284770 ANGP03950 147 aaKnown RBP12.85□□□□□ -0.35
PDLIM3-202ENST00000284770 DNAH10OSP0CZ25 163 aa12.85□□□□□ -0.35
PDLIM3-202ENST00000284770 IGHV3-30-3P0DP02 117 aa12.85□□□□□ -0.35
PDLIM3-202ENST00000284770 IGHV3-30-5P0DP03 117 aa12.85□□□□□ -0.35
PDLIM3-202ENST00000284770 C2orf88Q9BSF0 95 aa12.85□□□□□ -0.35
PDLIM3-202ENST00000284770 UBE2D1P51668 147 aa12.84□□□□□ -0.35
PDLIM3-202ENST00000284770 TSTD3H0UI37 97 aa12.84□□□□□ -0.35
PDLIM3-202ENST00000284770 LINC00269Q8N2A0 174 aa12.83□□□□□ -0.36
PDLIM3-202ENST00000284770 CHAC1Q9BUX1 264 aa12.83□□□□□ -0.36
PDLIM3-202ENST00000284770 Q9H8V8 135 aa12.83□□□□□ -0.36
PDLIM3-202ENST00000284770 PLECQ15149 4684 aaKnown RBP12.82□□□□□ -0.36
PDLIM3-202ENST00000284770 PCP4L1A6NKN8 68 aa12.81□□□□□ -0.36
PDLIM3-202ENST00000284770 FAM19A3Q7Z5A8 133 aa12.81□□□□□ -0.36
PDLIM3-202ENST00000284770 KLK12Q9UKR0 248 aa12.81□□□□□ -0.36
PDLIM3-202ENST00000284770 TINCRA0A1B0GVN0 87 aa12.81□□□□□ -0.36
PDLIM3-202ENST00000284770 REG3AQ06141 175 aa12.81□□□□□ -0.36
PDLIM3-202ENST00000284770 ZNF22P17026 224 aaPredicted RBP12.8□□□□□ -0.36
PDLIM3-202ENST00000284770 C14orf144Q96I85 54 aa12.8□□□□□ -0.36
PDLIM3-202ENST00000284770 PRR34Q9NV39 138 aa12.8□□□□□ -0.36
PDLIM3-202ENST00000284770 TENM2Q9NT68 2774 aa12.8□□□□□ -0.36
PDLIM3-202ENST00000284770 IGKV2D-26A0A0A0MRZ7 120 aa12.79□□□□□ -0.36
PDLIM3-202ENST00000284770 TRAV13-1A0A0B4J241 112 aa12.79□□□□□ -0.36
PDLIM3-202ENST00000284770 IGKV3OR2-268A0A0C4DH90 116 aa12.79□□□□□ -0.36
PDLIM3-202ENST00000284770 TMEM170BQ5T4T1 132 aa12.79□□□□□ -0.36
PDLIM3-202ENST00000284770 LINC00242Q5T6M2 205 aa12.79□□□□□ -0.36
PDLIM3-202ENST00000284770 CLPSL2Q6UWE3 100 aa12.79□□□□□ -0.36
PDLIM3-202ENST00000284770 LINC00959A0A1B0GUT2 108 aa12.78□□□□□ -0.36
PDLIM3-202ENST00000284770 ENHOQ6UWT2 76 aa12.77□□□□□ -0.36
PDLIM3-202ENST00000284770 IGLV5-45A0A087WSX0 123 aa12.76□□□□□ -0.37
PDLIM3-202ENST00000284770 K7EP13 123 aa12.76□□□□□ -0.37
PDLIM3-202ENST00000284770 COX8AP10176 69 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms