RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.44□□□□□ -1.38
SCUBE3-201ENST00000274938 LOC107984640A0A0U1RRK4 108 aa6.44□□□□□ -1.38
SCUBE3-201ENST00000274938 LINC00959A0A1B0GUT2 108 aa6.44□□□□□ -1.38
SCUBE3-201ENST00000274938 LMO4P61968 165 aa6.44□□□□□ -1.38
SCUBE3-201ENST00000274938 EML6Q6ZMW3 1958 aa6.44□□□□□ -1.38
SCUBE3-201ENST00000274938 PRYO14603 147 aa6.44□□□□□ -1.38
SCUBE3-201ENST00000274938 PLA2G2AP14555 144 aa6.43□□□□□ -1.38
SCUBE3-201ENST00000274938 LELP1Q5T871 98 aa6.43□□□□□ -1.38
SCUBE3-201ENST00000274938 Q6ZPA2 131 aa6.43□□□□□ -1.38
SCUBE3-201ENST00000274938 Q6ZS46 218 aa6.43□□□□□ -1.38
SCUBE3-201ENST00000274938 RNASE3P12724 160 aaKnown RBP6.42□□□□□ -1.38
SCUBE3-201ENST00000274938 CNFNQ9BYD5 112 aa6.42□□□□□ -1.38
SCUBE3-201ENST00000274938 LINC01548A6NM66 108 aa6.42□□□□□ -1.38
SCUBE3-201ENST00000274938 A8MZ25 164 aa6.42□□□□□ -1.38
SCUBE3-201ENST00000274938 KLLNB2CW77 178 aa6.42□□□□□ -1.38
SCUBE3-201ENST00000274938 IGKV2-28A0A075B6P5 120 aa6.42□□□□□ -1.38
SCUBE3-201ENST00000274938 IGKV2D-28P01615 120 aa6.42□□□□□ -1.38
SCUBE3-201ENST00000274938 RPL28P46779 137 aaKnown RBP6.42□□□□□ -1.38
SCUBE3-201ENST00000274938 Q8N976 141 aa6.42□□□□□ -1.38
SCUBE3-201ENST00000274938 DENND4AQ7Z401 1863 aa6.42□□□□□ -1.38
SCUBE3-201ENST00000274938 GVINP1Q7Z2Y8 2422 aa6.41□□□□□ -1.38
SCUBE3-201ENST00000274938 TRAV10A0A0B4J240 114 aa6.41□□□□□ -1.38
SCUBE3-201ENST00000274938 UBE2D3P61077 147 aa6.41□□□□□ -1.38
SCUBE3-201ENST00000274938 COL4A6Q14031 1691 aa6.41□□□□□ -1.38
SCUBE3-201ENST00000274938 KIAA1549Q9HCM3 1950 aa6.41□□□□□ -1.38
SCUBE3-201ENST00000274938 NLRC5Q86WI3 1866 aa6.41□□□□□ -1.38
SCUBE3-201ENST00000274938 LINC00474Q9P2X8 69 aa6.41□□□□□ -1.38
SCUBE3-201ENST00000274938 SPINK6Q6UWN8 80 aa6.41□□□□□ -1.38
SCUBE3-201ENST00000274938 C1orf229Q6ZS94 237 aaPredicted RBP6.41□□□□□ -1.38
SCUBE3-201ENST00000274938 C22orf34Q6ZV56 151 aa6.41□□□□□ -1.38
SCUBE3-201ENST00000274938 NANOS2P60321 138 aaKnown RBP6.4□□□□□ -1.38
SCUBE3-201ENST00000274938 WNK2Q9Y3S1 2297 aa6.4□□□□□ -1.38
SCUBE3-201ENST00000274938 POM121L12Q8N7R1 296 aa6.4□□□□□ -1.38
SCUBE3-201ENST00000274938 LINC00208Q96KT6 92 aa6.4□□□□□ -1.38
SCUBE3-201ENST00000274938 ACACAQ13085 2346 aa6.4□□□□□ -1.39
SCUBE3-201ENST00000274938 PROK1P58294 105 aa6.4□□□□□ -1.39
SCUBE3-201ENST00000274938 CRIP3Q6Q6R5 217 aa6.4□□□□□ -1.39
SCUBE3-201ENST00000274938 SOSTDC1Q6X4U4 206 aa6.4□□□□□ -1.39
SCUBE3-201ENST00000274938 TRBV7-7A0A0K0K1E9 115 aa6.4□□□□□ -1.39
SCUBE3-201ENST00000274938 IGIPA6NJ69 53 aa6.4□□□□□ -1.39
SCUBE3-201ENST00000274938 Q8N814 137 aa6.4□□□□□ -1.39
SCUBE3-201ENST00000274938 BBC3Q96PG8 261 aaPredicted RBP6.39□□□□□ -1.39
SCUBE3-201ENST00000274938 PPDPFQ9H3Y8 114 aa6.39□□□□□ -1.39
SCUBE3-201ENST00000274938 TICRRQ7Z2Z1 1910 aa6.39□□□□□ -1.39
SCUBE3-201ENST00000274938 C10orf25Q5T742 122 aa6.39□□□□□ -1.39
SCUBE3-201ENST00000274938 KIAA1671Q9BY89 1806 aa6.39□□□□□ -1.39
SCUBE3-201ENST00000274938 CDC42SE2Q9NRR3 84 aa6.39□□□□□ -1.39
SCUBE3-201ENST00000274938 CELA1Q9UNI1 258 aa6.39□□□□□ -1.39
SCUBE3-201ENST00000274938 IGHV4-30-4P0DP06 118 aa6.38□□□□□ -1.39
SCUBE3-201ENST00000274938 IGHV4-31P0DP07 118 aa6.38□□□□□ -1.39
SCUBE3-201ENST00000274938 C11orf21Q9P2W6 132 aa6.38□□□□□ -1.39
SCUBE3-201ENST00000274938 NCKAP5O14513 1909 aa6.38□□□□□ -1.39
SCUBE3-201ENST00000274938 COL6A6A6NMZ7 2263 aa6.38□□□□□ -1.39
SCUBE3-201ENST00000274938 EGFEM1PQ0D2K5 195 aa6.38□□□□□ -1.39
SCUBE3-201ENST00000274938 MALRD1Q5VYJ5 2156 aa6.38□□□□□ -1.39
SCUBE3-201ENST00000274938 TSC2P49815 1807 aa6.38□□□□□ -1.39
SCUBE3-201ENST00000274938 TRBV7-6A0A0J9YX20 115 aa6.38□□□□□ -1.39
SCUBE3-201ENST00000274938 PLAC8L1A1L4L8 177 aa6.38□□□□□ -1.39
SCUBE3-201ENST00000274938 Q6ZVQ6 151 aa6.38□□□□□ -1.39
SCUBE3-201ENST00000274938 CHCHD7Q9BUK0 85 aa6.38□□□□□ -1.39
SCUBE3-201ENST00000274938 USF3Q68DE3 2245 aa6.37□□□□□ -1.39
SCUBE3-201ENST00000274938 C1orf137Q5JT78 98 aa6.37□□□□□ -1.39
SCUBE3-201ENST00000274938 NRGNQ92686 78 aa6.37□□□□□ -1.39
SCUBE3-201ENST00000274938 PRR9Q5T870 116 aa6.37□□□□□ -1.39
SCUBE3-201ENST00000274938 Q8N6K4 173 aa6.37□□□□□ -1.39
SCUBE3-201ENST00000274938 CREBBPQ92793 2442 aa6.37□□□□□ -1.39
SCUBE3-201ENST00000274938 A0A087WVE0 104 aa6.37□□□□□ -1.39
SCUBE3-201ENST00000274938 ESRGQ1W209 222 aa6.36□□□□□ -1.39
SCUBE3-201ENST00000274938 PSMG3-AS1Q96PY0 264 aa6.36□□□□□ -1.39
SCUBE3-201ENST00000274938 PRORYQ9H606 182 aa6.36□□□□□ -1.39
SCUBE3-201ENST00000274938 ANAPC1Q9H1A4 1944 aa6.36□□□□□ -1.39
SCUBE3-201ENST00000274938 LINC00242Q5T6M2 205 aa6.36□□□□□ -1.39
SCUBE3-201ENST00000274938 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.36□□□□□ -1.39
SCUBE3-201ENST00000274938 Q8N3U1 123 aa6.36□□□□□ -1.39
SCUBE3-201ENST00000274938 CSDC2Q9Y534 153 aaKnown RBP6.36□□□□□ -1.39
SCUBE3-201ENST00000274938 CACNA1BQ00975 2339 aa6.36□□□□□ -1.39
SCUBE3-201ENST00000274938 TRBV10-3A0A0K0K1G6 114 aa6.36□□□□□ -1.39
SCUBE3-201ENST00000274938 F8WDY8 70 aa6.36□□□□□ -1.39
SCUBE3-201ENST00000274938 PRO0628Q9UI54 55 aa6.36□□□□□ -1.39
SCUBE3-201ENST00000274938 CYSRT1A8MQ03 144 aa6.35□□□□□ -1.39
SCUBE3-201ENST00000274938 PKDREJQ9NTG1 2253 aa6.35□□□□□ -1.39
SCUBE3-201ENST00000274938 hDV103S1A0JD37 113 aa6.35□□□□□ -1.39
SCUBE3-201ENST00000274938 SMIM1B2RUZ4 78 aa6.35□□□□□ -1.39
SCUBE3-201ENST00000274938 LINC00310P59036 64 aa6.35□□□□□ -1.39
SCUBE3-201ENST00000274938 SPTBN2O15020 2390 aa6.35□□□□□ -1.39
SCUBE3-201ENST00000274938 KPRPQ5T749 579 aaPredicted RBP6.35□□□□□ -1.39
SCUBE3-201ENST00000274938 Q6ZSV7 163 aa6.35□□□□□ -1.39
SCUBE3-201ENST00000274938 HELZP42694 1942 aaKnown RBP6.35□□□□□ -1.39
SCUBE3-201ENST00000274938 TMEM254Q8TBM7 123 aa6.34□□□□□ -1.39
SCUBE3-201ENST00000274938 TANC1Q9C0D5 1861 aa6.34□□□□□ -1.39
SCUBE3-201ENST00000274938 ROS1P08922 2347 aa6.34□□□□□ -1.39
SCUBE3-201ENST00000274938 RPL37AP8A6NKH3 93 aa6.34□□□□□ -1.39
SCUBE3-201ENST00000274938 SHISA2Q6UWI4 295 aa6.34□□□□□ -1.39
SCUBE3-201ENST00000274938 IGLV9-49A0A0B4J1Y8 123 aa6.34□□□□□ -1.39
SCUBE3-201ENST00000274938 PLA2G1BP04054 148 aaKnown RBP6.34□□□□□ -1.39
SCUBE3-201ENST00000274938 MUC4Q99102 2169 aa6.34□□□□□ -1.39
SCUBE3-201ENST00000274938 URB1-AS1Q96HZ7 61 aa6.34□□□□□ -1.39
SCUBE3-201ENST00000274938 FRMPD3Q5JV73 1810 aa6.33□□□□□ -1.4
SCUBE3-201ENST00000274938 Q8NA96 180 aa6.33□□□□□ -1.4
SCUBE3-201ENST00000274938 A0A087WYN8 130 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms